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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Rno-105931
UUCD1 version UUC-RaN-00261
Ensembl Protein ID ENSRNOP00000073080.1
UniProt Accession A0A0G2K4K7; A0A0G2K4K7_RAT
Genbank Protein ID ENSRNOP00000073080
Protein Name E3 ubiquitin-protein ligase PDZRN3
Genbank Nucleotide ID AABR07061567
Gene Name Pdzrn3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000057556.1 ENSRNOT00000090506.1 ENSRNOP00000073080.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
RAID2
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 3.50e-06 27.8 18 56
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCP.lC 45
    Ca+C+ ++d pl++pCgHvf+a C+ w +e +CP C
   Q: 18 CALCHKVLED-PLTTPCGHVFCAGCVLPW------VVQEGSCPsRC 56
    **********.******************......88888888445 PP
   

Organism Rattus norvegicus
Protein Sequence
(Fasta)
MGFELDRFDG EVDADLKCAL CHKVLEDPLT TPCGHVFCAG CVLPWVVQEG SCPSRCRGRL 60
SAKELNHVLP LKRLILKLDI KCAHAARGCG RVVKLQDLPE HLERCDFAPA RCRHAGCGQL 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Rno-105931|E3,RING|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CACCATGGGT TTCGAGTTGG ACCGCTTCGA CGGTGAAGTG GACCGCTGAT CTGAAGAGTG 60
CGCCCTCTGC CACAAGGTAC TGGAGGACCC GCTGACCACC CCGTGCGGCC ACGTATTCTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Rno-105931|E3,RING|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001478--PDZ
IPR008974--TRAF-like
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
IPR001293--Znf_TRAF

PROSITE

PS50106--PDZ
PS00518--ZF_RING_1
PS50089--ZF_RING_2
PS50145--ZF_TRAF

Pfam

PF00595--PDZ

SMART

SM00228--PDZ
SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0031594--C:neuromuscular junction
GO:0005654--C:nucleoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0007528--P:neuromuscular junction development

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001910 Ailuropoda melanoleuca 89.68 0.00e+00 1519.00
IUUC-Apl-003623 Anas platyrhynchos 84.99 0.00e+00 1311.00
IUUC-Ame-011171 Astyanax mexicanus 48.57 0.00e+00 715.00
IUUC-Bta-012364 Bos taurus 90.72 0.00e+00 1847.00
IUUC-Cja-019726 Callithrix jacchus 92.62 0.00e+00 1475.00
IUUC-Cpo-021680 Cavia porcellus 92.25 0.00e+00 1861.00
IUUC-Csa-023684 Chlorocebus sabaeus 94.00 0.00e+00 1943.00
IUUC-Cho-024555 Choloepus hoffmanni 74.91 2.00e-106 380.00
IUUC-Dre-027462 Danio rerio 71.23 0.00e+00 1415.00
IUUC-Dno-029974 Dasypus novemcinctus 93.98 2.00e-45 174.00
IUUC-Dor-031125 Dipodomys ordii 89.57 0.00e+00 1732.00
IUUC-Ete-032745 Echinops telfairi 81.68 0.00e+00 877.00
IUUC-Eca-034276 Equus caballus 91.37 0.00e+00 1469.00
IUUC-Fal-037334 Ficedula albicollis 78.50 0.00e+00 1539.00
IUUC-Gmo-038706 Gadus morhua 69.63 0.00e+00 1350.00
IUUC-Gga-040586 Gallus gallus 82.16 0.00e+00 1588.00
IUUC-Gac-041605 Gasterosteus aculeatus 68.16 0.00e+00 1343.00
IUUC-Ggo-044706 Gorilla gorilla 94.00 0.00e+00 1943.00
IUUC-Hsa-046677 Homo sapiens 93.91 0.00e+00 1943.00
IUUC-Itr-048660 Ictidomys tridecemlineatus 88.99 0.00e+00 1781.00
IUUC-Lch-049637 Latimeria chalumnae 68.08 4.00e-128 450.00
IUUC-Loc-052305 Lepisosteus oculatus 74.25 0.00e+00 1506.00
IUUC-Mcc-055573 Macaca mulatta 94.10 0.00e+00 1946.00
IUUC-Meu-056805 Macropus eugenii 81.16 0.00e+00 1629.00
IUUC-Mdo-062581 Monodelphis domestica 85.06 0.00e+00 1729.00
IUUC-Mmu-063597 Mus musculus 98.31 0.00e+00 2012.00
IUUC-Mpu-065685 Mustela putorius furo 92.15 0.00e+00 1421.00
IUUC-Mlu-067150 Myotis lucifugus 74.10 0.00e+00 1023.00
IUUC-Nle-068997 Nomascus leucogenys 94.20 0.00e+00 1917.00
IUUC-Ont-071534 Oreochromis niloticus 69.58 0.00e+00 1349.00
IUUC-Ola-086381 Oryzias latipes 68.50 0.00e+00 1353.00
IUUC-Oga-089068 Otolemur garnettii 94.07 0.00e+00 1895.00
IUUC-Oar-089252 Ovis aries 95.56 2.00e-77 282.00
IUUC-Pan-092366 Papio anubis 94.10 0.00e+00 1947.00
IUUC-Psi-093611 Pelodiscus sinensis 54.90 3.00e-81 294.00
IUUC-Pfo-096576 Poecilia formosa 67.63 5.00e-123 433.00
IUUC-Pab-098239 Pongo abelii 93.91 0.00e+00 1940.00
IUUC-Pca-100484 Procavia capensis 95.16 0.00e+00 857.00
IUUC-Pva-103202 Pteropus vampyrus 52.50 0.00e+00 865.00
IUUC-Tgu-116615 Taeniopygia guttata 79.48 3.00e-108 384.00
IUUC-Tru-118175 Takifugu rubripes 70.35 0.00e+00 1386.00
IUUC-Tsy-119569 Tarsius syrichta 86.21 0.00e+00 1433.00
IUUC-Tbe-127819 Tupaia belangeri 87.83 0.00e+00 1397.00
IUUC-Ttr-128328 Tursiops truncatus 89.69 0.00e+00 1471.00
IUUC-Xtr-132339 Xenopus tropicalis 76.54 0.00e+00 1543.00
Created Date 25-Jun-2017

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