iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108961

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377583

Gene Name

SELMODRAFT_412471

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_412471	EFJ26938	EFJ26938

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-16	59.5	194	223

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd.tllvsGsdDgtikvWDl 30
           gHt++v++l+  d ++++++s D+t+ vW+l
   Q: 194  GHTARVWDLHI-DaKMFITASEDCTCGVWSL 223
           8**********.88***************97 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MSQRCASRRF RPGLFLRHCL PGTGAQLDCY NLETGARYFP SVHVFDGIRV HGIVAAAAES 60
SALPPAIVAV HGEGKAKLFR LSTEALEPWQ CVPRFSKWIL DVQIFTKDDG HNVVLAIGLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCACAGC GCTGTGCTTC GCGGCGCTTC CGTCCAGGGT TGTTCTTGCG GGTAAGCGCT 60
CGCATTGTGG ATTCTTTGCG GTCTCAGCAT TGCCTGCCAG GCACCGGAGC GCAGCTGGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR002885--Pentatricopeptide_repeat
IPR015947--PUA-like_domain
IPR003105--SRA_YDG
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS51375--PPR
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS51015--YDG

Pfam

PF12854--PPR_1
PF13041--PPR_2
PF02182--SAD_SRA
PF00400--WD40

SMART

SM00466--SRA
SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

smo:SELMODRAFT_412471

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001020	Aegilops tauschii	29.85	7.00e-98	351.00
IUUC-Aml-001786	Ailuropoda melanoleuca	24.52	7.00e-44	172.00
IUUC-Atr-003053	Amborella trichopoda	29.57	4.00e-133	469.00
IUUC-Apl-003178	Anas platyrhynchos	22.85	2.00e-16	79.70
IUUC-Aca-004886	Anolis carolinensis	30.03	2.00e-27	117.00
IUUC-Aly-005509	Arabidopsis lyrata	31.53	4.00e-152	531.00
IUUC-Ath-007109	Arabidopsis thaliana	31.57	2.00e-153	536.00
IUUC-Ago-007817	Ashbya gossypii	23.44	8.00e-15	75.50
IUUC-Acl-008020	Aspergillus clavatus	21.95	2.00e-10	61.60
IUUC-Afu-009035	Aspergillus fumigatus	21.80	9.00e-09	55.50
IUUC-Ame-011051	Astyanax mexicanus	22.98	1.00e-17	85.10
IUUC-Bta-012793	Bos taurus	22.90	3.00e-38	153.00
IUUC-Bci-013679	Botrytis cinerea	21.40	6.00e-05	43.10
IUUC-Bdi-014401	Brachypodium distachyon	28.68	9.00e-120	424.00
IUUC-Bol-015628	Brassica oleracea	32.89	1.00e-136	479.00
IUUC-Bra-017446	Brassica rapa	33.07	9.00e-154	537.00
IUUC-Cja-018910	Callithrix jacchus	23.36	8.00e-39	155.00
IUUC-Cfa-021260	Canis familiaris	24.00	4.00e-42	166.00
IUUC-Cpo-022205	Cavia porcellus	24.03	3.00e-38	153.00
IUUC-Csa-023510	Chlorocebus sabaeus	22.97	3.00e-38	153.00
IUUC-Dre-028004	Danio rerio	22.62	2.00e-25	111.00
IUUC-Dno-029804	Dasypus novemcinctus	23.85	2.00e-43	171.00
IUUC-Dor-030512	Dipodomys ordii	23.61	4.00e-24	106.00
IUUC-Ete-033076	Echinops telfairi	28.06	3.00e-23	103.00
IUUC-Eca-033727	Equus caballus	23.97	3.00e-36	146.00
IUUC-Eeu-035210	Erinaceus europaeus	23.19	2.00e-28	120.00
IUUC-Fca-035433	Felis catus	23.95	8.00e-44	171.00
IUUC-Fal-036807	Ficedula albicollis	24.51	2.00e-24	106.00
IUUC-Gmo-039180	Gadus morhua	23.77	3.00e-15	77.00
IUUC-Gga-040482	Gallus gallus	22.73	5.00e-20	92.80
IUUC-Gac-042066	Gasterosteus aculeatus	23.60	7.00e-15	75.90
IUUC-Gma-042704	Glycine max	28.31	2.00e-96	347.00
IUUC-Ggo-044942	Gorilla gorilla	23.35	1.00e-40	161.00
IUUC-Hsa-046408	Homo sapiens	23.81	9.00e-44	171.00
IUUC-Hvu-047448	Hordeum vulgare	29.93	6.00e-122	431.00
IUUC-Itr-048756	Ictidomys tridecemlineatus	24.16	6.00e-46	179.00
IUUC-Lch-050170	Latimeria chalumnae	23.23	6.00e-43	169.00
IUUC-Lpe-051575	Leersia perrieri	28.86	8.00e-111	394.00
IUUC-Lma-053318	Leptosphaeria maculans	20.80	2.00e-07	50.80
IUUC-Laf-054299	Loxodonta africana	23.46	6.00e-41	162.00
IUUC-Mcc-055438	Macaca mulatta	23.02	2.00e-38	154.00
IUUC-Meu-056206	Macropus eugenii	26.61	6.00e-21	95.90
IUUC-Mtr-058455	Medicago truncatula	29.78	3.00e-87	316.00
IUUC-Mga-059962	Meleagris gallopavo	22.96	2.00e-16	80.10
IUUC-Mvi-060438	Microbotryum violaceum	23.30	5.00e-11	62.80
IUUC-Mmr-061353	Microcebus murinus	23.47	3.00e-43	170.00
IUUC-Mdo-062061	Monodelphis domestica	28.48	2.00e-23	103.00
IUUC-Mmu-064386	Mus musculus	23.64	1.00e-39	158.00
IUUC-Mac-065653	Musa acuminata	28.39	1.00e-125	443.00
IUUC-Mpu-066420	Mustela putorius furo	24.61	2.00e-45	177.00
IUUC-Mlu-068104	Myotis lucifugus	22.30	2.00e-30	127.00
IUUC-Nle-069836	Nomascus leucogenys	24.84	9.00e-27	115.00
IUUC-Ont-071605	Oreochromis niloticus	22.08	3.00e-21	97.10
IUUC-Oan-073645	Ornithorhynchus anatinus	23.29	4.00e-36	146.00
IUUC-Ocu-074708	Oryctolagus cuniculus	24.06	2.00e-31	130.00
IUUC-Oba-075290	Oryza barthii	29.90	2.00e-104	373.00
IUUC-Obr-076647	Oryza brachyantha	29.51	6.00e-121	428.00
IUUC-Ogl-077628	Oryza glaberrima	29.21	2.00e-98	353.00
IUUC-Ogu-078209	Oryza glumaepatula	29.87	2.00e-103	370.00
IUUC-Oin-079342	Oryza indica	29.84	2.00e-92	333.00
IUUC-Olo-080334	Oryza longistaminata	29.52	9.00e-85	308.00
IUUC-Ome-081776	Oryza meridionalis	29.18	2.00e-95	343.00
IUUC-Oni-082311	Oryza nivara	29.84	3.00e-92	333.00
IUUC-Opu-083195	Oryza punctata	26.98	1.00e-92	334.00
IUUC-Oru-085006	Oryza rufipogon	29.90	6.00e-104	371.00
IUUC-Osa-085317	Oryza sativa	29.21	7.00e-98	351.00
IUUC-Ola-087145	Oryzias latipes	22.94	2.00e-13	70.90
IUUC-Olu-087785	Ostreococcus lucimarinus	23.51	3.00e-41	163.00
IUUC-Oga-088206	Otolemur garnettii	23.70	2.00e-44	174.00
IUUC-Oar-089802	Ovis aries	23.27	3.00e-37	150.00
IUUC-Ptr-091528	Pan troglodytes	23.64	2.00e-40	160.00
IUUC-Pan-092782	Papio anubis	23.54	1.00e-39	157.00
IUUC-Psi-093102	Pelodiscus sinensis	24.36	5.00e-23	101.00
IUUC-Ppa-095436	Physcomitrella patens	32.34	5.00e-126	445.00
IUUC-Pfo-097423	Poecilia formosa	20.22	4.00e-11	63.50
IUUC-Pab-097763	Pongo abelii	23.39	2.00e-38	153.00
IUUC-Pop-099090	Populus trichocarpa	29.23	1.00e-96	348.00
IUUC-Pca-100173	Procavia capensis	23.36	6.00e-41	162.00
IUUC-Ppe-101580	Prunus persica	29.02	1.00e-127	451.00
IUUC-Pva-102715	Pteropus vampyrus	23.36	8.00e-39	155.00
IUUC-Rno-105122	Rattus norvegicus	24.00	1.00e-45	177.00
IUUC-Sha-107208	Sarcophilus harrisii	23.19	2.00e-39	157.00
IUUC-Spo-108272	Schizosaccharomyces pombe	23.41	5.00e-17	82.80
IUUC-Sit-109932	Setaria italica	28.29	1.00e-126	446.00
IUUC-Sly-111685	Solanum lycopersicum	30.13	5.00e-133	468.00
IUUC-Sar-112998	Sorex araneus	24.29	7.00e-45	175.00
IUUC-Sbi-114074	Sorghum bicolor	29.80	5.00e-116	412.00
IUUC-Ssc-115619	Sus scrofa	25.48	8.00e-22	98.60
IUUC-Tgu-117485	Taeniopygia guttata	25.00	2.00e-18	87.00
IUUC-Tru-118104	Takifugu rubripes	24.08	3.00e-19	90.50
IUUC-Tni-119995	Tetraodon nigroviridis	24.03	5.00e-18	86.30
IUUC-Tca-121790	Theobroma cacao	31.16	1.00e-123	437.00
IUUC-Tae-125371	Triticum aestivum	27.87	1.00e-115	410.00
IUUC-Tur-126787	Triticum urartu	29.68	6.00e-119	421.00
IUUC-Tbe-128082	Tupaia belangeri	42.86	2.00e-14	73.90
IUUC-Ttr-128387	Tursiops truncatus	26.14	3.00e-20	93.60
IUUC-Vvi-131701	Vitis vinifera	32.55	2.00e-153	536.00
IUUC-Xtr-132622	Xenopus tropicalis	23.58	2.00e-51	196.00
IUUC-Xma-134014	Xiphophorus maculatus	23.48	1.00e-11	65.10
IUUC-Zma-135732	Zea mays	30.79	5.00e-125	441.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence