iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000006365.1	ENSPSIT00000007045.1	ENSPSIP00000007005.1
ENSPSIG00000006365.1	ENSPSIT00000007051.1	ENSPSIP00000007010.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-07	31.7	93	126

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDlr 31
           gH    +c+ f ++  +l++sG+ Dg +++WDl+
   Q: 93   GHRRTPWCVTFhPTipGLIASGCLDGEVRIWDLH 126
           6777779*****66679***************97 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MKVVPEKNAV RILWGRERGT QALGAQRLLQ ELVEDKTRWM KWEGKKVELP DSPRSTFLLA 60
FSPDRTLMAS THVNHNIYIT EVKTGKCVHS LVGHRRTPWC VTFHPTIPGL IASGCLDGEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGGAATAG AATGCTGTCT GTTTGCATTT GGGTTACCTA CGGAATAATT TATTTTTTTT 60
TAAACTGTAA GGGATAGAAA CTGTTTTTTT CCCAAAGTGA CTTGCAAAGA CTTCTTTAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0005930--C:axoneme
GO:0005829--C:cytosol
GO:0005739--C:mitochondrion
GO:0045335--C:phagocytic vesicle
GO:0006914--P:autophagy
GO:0008285--P:negative regulation of cell proliferation
GO:0043524--P:negative regulation of neuron apoptotic process
GO:0021915--P:neural tube development
GO:0098779--P:positive regulation of macromitophagy in response to mitochondrial depolarization
GO:0043552--P:positive regulation of phosphatidylinositol 3-kinase activity
GO:2000785--P:regulation of autophagosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001917	Ailuropoda melanoleuca	83.32	0.00e+00	1564.00
IUUC-Atr-002557	Amborella trichopoda	37.26	2.00e-30	127.00
IUUC-Apl-004186	Anas platyrhynchos	91.51	0.00e+00	2185.00
IUUC-Aca-004419	Anolis carolinensis	82.84	0.00e+00	1940.00
IUUC-Aly-006308	Arabidopsis lyrata	37.16	2.00e-28	120.00
IUUC-Ath-007656	Arabidopsis thaliana	35.98	5.00e-28	119.00
IUUC-Ame-011354	Astyanax mexicanus	58.35	0.00e+00	1300.00
IUUC-Bta-012455	Bos taurus	81.31	0.00e+00	1941.00
IUUC-Bdi-014580	Brachypodium distachyon	41.10	1.00e-29	124.00
IUUC-Bol-016094	Brassica oleracea	39.13	2.00e-28	120.00
IUUC-Bra-017308	Brassica rapa	37.74	2.00e-29	124.00
IUUC-Cja-019073	Callithrix jacchus	92.58	8.00e-147	513.00
IUUC-Cfa-020994	Canis familiaris	85.09	0.00e+00	1286.00
IUUC-Cpo-022101	Cavia porcellus	83.54	0.00e+00	1890.00
IUUC-Csa-023273	Chlorocebus sabaeus	79.90	0.00e+00	1340.00
IUUC-Cin-025567	Ciona intestinalis	53.14	5.00e-57	215.00
IUUC-Csv-026005	Ciona savignyi	47.77	6.00e-56	210.00
IUUC-Dre-028282	Danio rerio	58.81	0.00e+00	1306.00
IUUC-Dno-029948	Dasypus novemcinctus	81.29	0.00e+00	1881.00
IUUC-Dor-030568	Dipodomys ordii	78.05	0.00e+00	1010.00
IUUC-Ete-032864	Echinops telfairi	77.41	0.00e+00	982.00
IUUC-Eca-034392	Equus caballus	79.61	0.00e+00	1340.00
IUUC-Eeu-034440	Erinaceus europaeus	71.26	0.00e+00	1020.00
IUUC-Fca-035359	Felis catus	79.94	0.00e+00	1871.00
IUUC-Fal-037483	Ficedula albicollis	90.67	0.00e+00	2201.00
IUUC-Gmo-039343	Gadus morhua	75.63	0.00e+00	783.00
IUUC-Gga-040787	Gallus gallus	91.68	0.00e+00	1384.00
IUUC-Gac-041321	Gasterosteus aculeatus	61.73	0.00e+00	1360.00
IUUC-Gma-044022	Glycine max	37.13	1.00e-30	128.00
IUUC-Ggo-044775	Gorilla gorilla	85.19	0.00e+00	950.00
IUUC-Hsa-045708	Homo sapiens	81.11	0.00e+00	1927.00
IUUC-Hvu-047536	Hordeum vulgare	41.57	7.00e-31	128.00
IUUC-Itr-048376	Ictidomys tridecemlineatus	77.23	0.00e+00	1015.00
IUUC-Lch-050255	Latimeria chalumnae	71.35	0.00e+00	1417.00
IUUC-Lpe-050684	Leersia perrieri	41.18	1.00e-31	131.00
IUUC-Loc-052881	Lepisosteus oculatus	66.36	0.00e+00	1489.00
IUUC-Laf-053342	Loxodonta africana	78.25	0.00e+00	650.00
IUUC-Mcc-055848	Macaca mulatta	79.45	0.00e+00	1898.00
IUUC-Meu-056320	Macropus eugenii	80.49	0.00e+00	1045.00
IUUC-Mtr-058484	Medicago truncatula	39.13	6.00e-30	125.00
IUUC-Mga-059401	Meleagris gallopavo	93.80	0.00e+00	1847.00
IUUC-Mmr-061037	Microcebus murinus	83.01	0.00e+00	1885.00
IUUC-Mdo-062484	Monodelphis domestica	72.29	0.00e+00	1653.00
IUUC-Mmu-064090	Mus musculus	80.79	0.00e+00	1898.00
IUUC-Mac-065308	Musa acuminata	44.16	1.00e-29	125.00
IUUC-Mpu-066165	Mustela putorius furo	80.32	0.00e+00	1301.00
IUUC-Mlu-068038	Myotis lucifugus	80.45	0.00e+00	1919.00
IUUC-Nle-069361	Nomascus leucogenys	84.43	0.00e+00	1731.00
IUUC-Opr-070360	Ochotona princeps	82.22	0.00e+00	783.00
IUUC-Ont-071277	Oreochromis niloticus	62.61	0.00e+00	1356.00
IUUC-Oan-073623	Ornithorhynchus anatinus	78.90	0.00e+00	1008.00
IUUC-Ocu-074600	Oryctolagus cuniculus	85.22	0.00e+00	1239.00
IUUC-Oba-075024	Oryza barthii	42.59	6.00e-33	135.00
IUUC-Obr-076172	Oryza brachyantha	37.07	2.00e-33	137.00
IUUC-Ogl-077411	Oryza glaberrima	37.07	7.00e-33	135.00
IUUC-Ogu-078025	Oryza glumaepatula	42.59	9.00e-33	135.00
IUUC-Oni-082463	Oryza nivara	37.07	6.00e-33	136.00
IUUC-Opu-084041	Oryza punctata	42.59	1.00e-32	134.00
IUUC-Oru-085075	Oryza rufipogon	42.59	2.00e-32	134.00
IUUC-Osa-085781	Oryza sativa	37.07	8.00e-33	135.00
IUUC-Ola-086729	Oryzias latipes	62.71	0.00e+00	1374.00
IUUC-Olu-087735	Ostreococcus lucimarinus	38.71	2.00e-23	103.00
IUUC-Oga-089113	Otolemur garnettii	80.29	0.00e+00	1831.00
IUUC-Oar-090171	Ovis aries	84.33	0.00e+00	1870.00
IUUC-Ptr-090970	Pan troglodytes	81.18	0.00e+00	1930.00
IUUC-Pan-092778	Papio anubis	80.43	0.00e+00	1346.00
IUUC-Pma-094563	Petromyzon marinus	75.00	5.00e-107	380.00
IUUC-Ppa-095832	Physcomitrella patens	35.38	4.00e-30	126.00
IUUC-Pfo-097365	Poecilia formosa	61.05	0.00e+00	1274.00
IUUC-Pab-098647	Pongo abelii	78.23	0.00e+00	1019.00
IUUC-Pop-099742	Populus trichocarpa	40.86	4.00e-31	129.00
IUUC-Pca-101035	Procavia capensis	74.97	0.00e+00	960.00
IUUC-Ppe-101783	Prunus persica	42.22	1.00e-30	128.00
IUUC-Pva-103187	Pteropus vampyrus	82.68	0.00e+00	808.00
IUUC-Rno-105701	Rattus norvegicus	80.79	0.00e+00	1881.00
IUUC-Sha-107612	Sarcophilus harrisii	82.94	0.00e+00	1963.00
IUUC-Smo-109107	Selaginella moellendorffii	41.25	8.00e-28	118.00
IUUC-Sit-110786	Setaria italica	41.10	1.00e-31	131.00
IUUC-Sly-110859	Solanum lycopersicum	37.14	2.00e-31	130.00
IUUC-Stu-112031	Solanum tuberosum	37.62	2.00e-31	130.00
IUUC-Sar-113242	Sorex araneus	77.65	0.00e+00	891.00
IUUC-Ssc-116094	Sus scrofa	81.62	0.00e+00	1917.00
IUUC-Tru-118308	Takifugu rubripes	60.85	0.00e+00	1309.00
IUUC-Tsy-119552	Tarsius syrichta	76.46	0.00e+00	996.00
IUUC-Tca-121616	Theobroma cacao	37.62	3.00e-31	130.00
IUUC-Tae-123681	Triticum aestivum	40.96	6.00e-30	124.00
IUUC-Tur-126480	Triticum urartu	40.96	4.00e-30	125.00
IUUC-Tbe-127902	Tupaia belangeri	79.86	0.00e+00	850.00
IUUC-Ttr-129278	Tursiops truncatus	76.60	0.00e+00	982.00
IUUC-Vpa-130741	Vicugna pacos	78.20	0.00e+00	734.00
IUUC-Vvi-131437	Vitis vinifera	45.45	3.00e-30	127.00
IUUC-Xtr-132247	Xenopus tropicalis	65.75	0.00e+00	1326.00
IUUC-Xma-134277	Xiphophorus maculatus	62.06	0.00e+00	1380.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence