iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCAFG00000005869.5	ENSCAFT00000009474.5	ENSCAFP00000008794.4
ENSCAFG00000005869.5	ENSCAFT00000048379.1	ENSCAFP00000041943.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-20	72.7	769	797

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf.sd.tllvsGsdDgtikvWDlrt 32
           v  la+ ++ ++l+s+++D  +k W++++
   Q: 769  VEKLALsHCtHFLASSGHDQRLKFWNMSQ 797
           5556665333569*************865 PP

Organism

Canis familiaris

Protein Sequence
(Fasta)

MPREYNEDED PAARRRKKKS YYAKLRQQEI ERERELAEKY RDRAKERRDG VNKDYEETEL 60
ISTTANYRAV GPTAEADKSA AEKRRQLIQE SKFLGGDMEH THLVKGLDFA LLQKVRAEIA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGGAAC GAGACAGTAA GGCTCGGGTC ATCTGTCCAT TATTACCTGC AGGATTTGGG 60
ACGCTTGGCA CGTTGTTTTC ACTTCACAGT TTAAGCCCTG TGTAGGTGGT GTGACGCTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR012492--RED_C
IPR012916--RED_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF07807--RED_C
PF07808--RED_N
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0042273--P:ribosomal large subunit biogenesis
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000562	Aegilops tauschii	33.64	3.00e-47	182.00
IUUC-Aml-001768	Ailuropoda melanoleuca	92.94	0.00e+00	1408.00
IUUC-Atr-002764	Amborella trichopoda	34.87	1.00e-21	95.90
IUUC-Apl-003880	Anas platyrhynchos	77.61	0.00e+00	634.00
IUUC-Aca-005060	Anolis carolinensis	78.45	0.00e+00	1155.00
IUUC-Aly-006484	Arabidopsis lyrata	37.16	8.00e-50	190.00
IUUC-Ath-006652	Arabidopsis thaliana	39.66	1.00e-58	220.00
IUUC-Bta-013497	Bos taurus	93.15	0.00e+00	712.00
IUUC-Bdi-014378	Brachypodium distachyon	38.60	1.00e-55	210.00
IUUC-Bol-016352	Brassica oleracea	39.32	9.00e-60	223.00
IUUC-Bra-017103	Brassica rapa	39.32	3.00e-60	225.00
IUUC-Cel-018192	Caenorhabditis elegans	25.22	4.00e-15	75.50
IUUC-Cja-018792	Callithrix jacchus	92.00	0.00e+00	681.00
IUUC-Cpo-022331	Cavia porcellus	93.37	0.00e+00	691.00
IUUC-Cre-022921	Chlamydomonas reinhardtii	40.96	1.00e-37	149.00
IUUC-Csa-023414	Chlorocebus sabaeus	92.70	0.00e+00	725.00
IUUC-Cho-024600	Choloepus hoffmanni	91.89	0.00e+00	643.00
IUUC-Cin-025565	Ciona intestinalis	38.69	6.00e-62	231.00
IUUC-Csv-026294	Ciona savignyi	39.59	7.00e-61	227.00
IUUC-Cne-026979	Cryptococcus neoformans	33.33	7.00e-40	157.00
IUUC-Cme-027192	Cyanidioschyzon merolae	26.15	3.00e-21	95.90
IUUC-Dre-028492	Danio rerio	64.44	2.00e-131	461.00
IUUC-Dno-030050	Dasypus novemcinctus	88.47	0.00e+00	1290.00
IUUC-Dor-030386	Dipodomys ordii	80.83	2.00e-171	594.00
IUUC-Dse-031203	Dothistroma septosporum	24.67	6.00e-12	65.50
IUUC-Dme-032012	Drosophila melanogaster	34.71	1.00e-58	220.00
IUUC-Ete-032491	Echinops telfairi	90.86	0.00e+00	684.00
IUUC-Eca-033583	Equus caballus	92.22	0.00e+00	1375.00
IUUC-Eeu-034976	Erinaceus europaeus	93.83	6.00e-177	612.00
IUUC-Fca-036417	Felis catus	93.48	0.00e+00	694.00
IUUC-Gmo-039505	Gadus morhua	66.07	8.00e-141	493.00
IUUC-Ggr-039978	Gaeumannomyces graminis	22.66	5.00e-10	58.90
IUUC-Gga-040732	Gallus gallus	69.82	4.00e-147	513.00
IUUC-Gac-041313	Gasterosteus aculeatus	63.69	4.00e-135	474.00
IUUC-Gma-044122	Glycine max	40.00	6.00e-58	217.00
IUUC-Ggo-044748	Gorilla gorilla	92.70	0.00e+00	725.00
IUUC-Hsa-046943	Homo sapiens	92.16	0.00e+00	722.00
IUUC-Hvu-047659	Hordeum vulgare	37.19	7.00e-55	207.00
IUUC-Itr-048110	Ictidomys tridecemlineatus	92.78	0.00e+00	674.00
IUUC-Lch-050331	Latimeria chalumnae	58.94	2.00e-112	399.00
IUUC-Lpe-051193	Leersia perrieri	39.44	4.00e-59	221.00
IUUC-Loc-051946	Lepisosteus oculatus	69.20	0.00e+00	909.00
IUUC-Laf-054035	Loxodonta africana	92.42	0.00e+00	690.00
IUUC-Mcc-055285	Macaca mulatta	91.43	3.00e-94	337.00
IUUC-Meu-056596	Macropus eugenii	84.07	5.00e-173	600.00
IUUC-Mor-056995	Magnaporthe oryzae	25.18	1.00e-13	70.90
IUUC-Mtr-058637	Medicago truncatula	40.07	9.00e-58	217.00
IUUC-Mga-059839	Meleagris gallopavo	73.34	0.00e+00	981.00
IUUC-Mdo-062868	Monodelphis domestica	81.60	0.00e+00	1226.00
IUUC-Mmu-064305	Mus musculus	88.92	0.00e+00	681.00
IUUC-Mac-065041	Musa acuminata	38.38	8.00e-58	217.00
IUUC-Mpu-066779	Mustela putorius furo	95.95	0.00e+00	706.00
IUUC-Mlu-067223	Myotis lucifugus	89.81	0.00e+00	1315.00
IUUC-Ncr-068919	Neurospora crassa	26.58	2.00e-08	53.50
IUUC-Nle-069852	Nomascus leucogenys	93.66	0.00e+00	688.00
IUUC-Ont-072452	Oreochromis niloticus	65.77	2.00e-138	485.00
IUUC-Oan-073163	Ornithorhynchus anatinus	80.69	3.00e-66	243.00
IUUC-Ocu-074628	Oryctolagus cuniculus	93.89	0.00e+00	714.00
IUUC-Oba-075868	Oryza barthii	39.44	1.00e-57	216.00
IUUC-Obr-076768	Oryza brachyantha	39.08	6.00e-58	218.00
IUUC-Ogl-077424	Oryza glaberrima	39.44	3.00e-59	222.00
IUUC-Ogu-078847	Oryza glumaepatula	39.08	5.00e-57	214.00
IUUC-Oin-079495	Oryza indica	39.44	3.00e-59	222.00
IUUC-Olo-080268	Oryza longistaminata	39.08	6.00e-57	214.00
IUUC-Ome-081709	Oryza meridionalis	39.23	6.00e-51	194.00
IUUC-Oni-082749	Oryza nivara	39.44	3.00e-59	222.00
IUUC-Opu-084023	Oryza punctata	32.75	6.00e-40	157.00
IUUC-Oru-084764	Oryza rufipogon	39.08	5.00e-57	214.00
IUUC-Osa-086009	Oryza sativa	39.44	3.00e-59	221.00
IUUC-Ola-086463	Oryzias latipes	60.75	1.00e-129	456.00
IUUC-Olu-087897	Ostreococcus lucimarinus	31.58	5.00e-43	167.00
IUUC-Oga-089114	Otolemur garnettii	91.03	0.00e+00	705.00
IUUC-Ptr-090556	Pan troglodytes	92.43	0.00e+00	724.00
IUUC-Pan-092828	Papio anubis	92.16	0.00e+00	722.00
IUUC-Psi-093609	Pelodiscus sinensis	75.03	0.00e+00	1026.00
IUUC-Pma-094413	Petromyzon marinus	54.49	1.00e-101	363.00
IUUC-Ppa-095422	Physcomitrella patens	41.40	1.00e-66	246.00
IUUC-Pfo-096389	Poecilia formosa	65.18	2.00e-132	465.00
IUUC-Pab-098095	Pongo abelii	92.97	0.00e+00	724.00
IUUC-Pop-099612	Populus trichocarpa	38.16	6.00e-54	204.00
IUUC-Pca-100408	Procavia capensis	93.30	0.00e+00	698.00
IUUC-Ppe-101931	Prunus persica	38.64	1.00e-54	206.00
IUUC-Pva-102549	Pteropus vampyrus	91.67	0.00e+00	691.00
IUUC-Rno-105079	Rattus norvegicus	91.89	0.00e+00	1372.00
IUUC-Sha-107299	Sarcophilus harrisii	83.66	0.00e+00	1207.00
IUUC-Sja-107829	Schizosaccharomyces japonicus	30.27	2.00e-22	100.00
IUUC-Spo-108122	Schizosaccharomyces pombe	29.47	7.00e-27	114.00
IUUC-Smo-109613	Selaginella moellendorffii	38.81	3.00e-51	195.00
IUUC-Sit-110263	Setaria italica	38.03	2.00e-56	212.00
IUUC-Sly-110988	Solanum lycopersicum	37.46	1.00e-53	203.00
IUUC-Stu-112713	Solanum tuberosum	37.81	1.00e-54	206.00
IUUC-Sbi-114617	Sorghum bicolor	37.32	3.00e-54	205.00
IUUC-Sre-115136	Sporisorium reilianum	31.25	6.00e-13	68.90
IUUC-Ssc-116268	Sus scrofa	90.85	0.00e+00	1380.00
IUUC-Tgu-116720	Taeniopygia guttata	92.14	0.00e+00	655.00
IUUC-Tru-117977	Takifugu rubripes	65.48	1.00e-130	459.00
IUUC-Tsy-119121	Tarsius syrichta	91.90	7.00e-115	407.00
IUUC-Tni-119904	Tetraodon nigroviridis	67.86	1.00e-133	469.00
IUUC-Tca-121718	Theobroma cacao	40.28	5.00e-59	221.00
IUUC-Tae-124219	Triticum aestivum	37.54	1.00e-54	206.00
IUUC-Tme-126922	Tuber melanosporum	24.04	1.00e-11	64.30
IUUC-Tbe-127276	Tupaia belangeri	93.27	5.00e-159	553.00
IUUC-Uma-129505	Ustilago maydis	32.52	1.00e-13	70.90
IUUC-Vpa-130276	Vicugna pacos	94.76	1.00e-139	488.00
IUUC-Vvi-131377	Vitis vinifera	39.58	2.00e-58	221.00
IUUC-Xtr-132529	Xenopus tropicalis	74.44	0.00e+00	1135.00
IUUC-Xma-134177	Xiphophorus maculatus	64.88	1.00e-124	439.00
IUUC-Yli-134665	Yarrowia lipolytica	24.32	1.00e-06	47.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence