iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Meu-056129

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

HOXB4

Genbank Nucleotide ID

JN378719

Gene Name

HOXB4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMEUG00000010931.1	ENSMEUT00000010955.1	ENSMEUP00000009971.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/Other	86.90	3.00e-98	355.00	IUUC-Hsa-046919

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Macropus eugenii

Protein Sequence
(Fasta)

MAMSSFLINS NYVDPKFPPC EEYSQSDYLP SNHSPGYYGS GQRRESSFQH EAGYGRRAAC 60
TVQTYASCQE PGHPPPTVLS PRAPVQPQAG ALLPEPGQRC EAVSPSPPPP PCGQNPLHPS 120

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Nucleotide Sequence
(Fasta)

ATGGCTATGA GTTCTTTTTT GATCAACTCC AACTATGTGG ATCCCAAGTT CCCTCCCTGC 60
GAGGAATATT CACAGAGCGA TTACCTACCC AGCAACCACT CGCCCGGGTA CTACGGCAGC 120

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Sequence Source

Ensembl

Keyword

KW-0217--Developmental protein
KW-0238--DNA-binding
KW-0371--Homeobox
KW-0539--Nucleus

Interpro

IPR009057--Homeobox-like
IPR017995--Homeobox_antennapedia
IPR001827--Homeobox_Antennapedia_CS
IPR017970--Homeobox_CS
IPR001356--Homeobox_dom
IPR020479--Homeobox_metazoa

PROSITE

PS00032--ANTENNAPEDIA
PS00027--HOMEOBOX_1
PS50071--HOMEOBOX_2

Pfam

PF00046--Homeobox

PRINTS

PR00025--ANTENNAPEDIA
PR00024--HOMEOBOX

SMART

SM00389--HOX

Gene Ontology

GO:0005813--C:centrosome
GO:0005634--C:nucleus
GO:0043565--F:sequence-specific DNA binding
GO:0003700--F:transcription factor activity, sequence-specific DNA binding
GO:0009952--P:anterior/posterior pattern specification
GO:0048539--P:bone marrow development
GO:0008283--P:cell proliferation
GO:0060216--P:definitive hemopoiesis
GO:0048704--P:embryonic skeletal system morphogenesis
GO:0060218--P:hematopoietic stem cell differentiation
GO:0002011--P:morphogenesis of an epithelial sheet
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:2000738--P:positive regulation of stem cell differentiation
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0048103--P:somatic stem cell division
GO:0048536--P:spleen development

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002156	Ailuropoda melanoleuca	64.19	1.00e-70	258.00
IUUC-Aca-004281	Anolis carolinensis	76.02	2.00e-84	304.00
IUUC-Ame-011424	Astyanax mexicanus	72.73	4.00e-80	290.00
IUUC-Bta-013580	Bos taurus	82.10	3.00e-98	350.00
IUUC-Bdi-014316	Brachypodium distachyon	45.00	4.00e-09	55.10
IUUC-Bra-017918	Brassica rapa	47.46	2.00e-09	56.20
IUUC-Cja-019422	Callithrix jacchus	87.61	9.00e-100	355.00
IUUC-Cfa-020551	Canis familiaris	83.41	2.00e-102	364.00
IUUC-Cpo-022099	Cavia porcellus	95.08	6.00e-63	232.00
IUUC-Csa-023337	Chlorocebus sabaeus	82.10	3.00e-96	343.00
IUUC-Dre-027947	Danio rerio	68.40	3.00e-84	303.00
IUUC-Dno-029094	Dasypus novemcinctus	80.26	8.00e-94	335.00
IUUC-Dme-031651	Drosophila melanogaster	29.82	6.30e-01	30.80
IUUC-Fca-035652	Felis catus	68.95	1.00e-80	291.00
IUUC-Gac-041606	Gasterosteus aculeatus	65.68	5.00e-77	280.00
IUUC-Hsa-046919	Homo sapiens	82.02	1.00e-95	342.00
IUUC-Itr-048677	Ictidomys tridecemlineatus	87.01	2.00e-108	384.00
IUUC-Lch-050353	Latimeria chalumnae	70.12	8.00e-84	302.00
IUUC-Laf-053406	Loxodonta africana	82.97	5.00e-99	353.00
IUUC-Mdo-062656	Monodelphis domestica	98.75	2.00e-129	454.00
IUUC-Mmu-064317	Mus musculus	86.40	4.00e-106	377.00
IUUC-Mpu-066715	Mustela putorius furo	82.53	4.00e-97	347.00
IUUC-Nle-069403	Nomascus leucogenys	81.14	3.00e-95	340.00
IUUC-Ont-072022	Oreochromis niloticus	62.30	2.00e-72	265.00
IUUC-Oan-073355	Ornithorhynchus anatinus	81.07	7.00e-102	362.00
IUUC-Obr-076254	Oryza brachyantha	43.33	7.00e-08	50.40
IUUC-Oga-089067	Otolemur garnettii	81.22	4.00e-96	343.00
IUUC-Oar-089454	Ovis aries	77.63	6.00e-93	332.00
IUUC-Ptr-091405	Pan troglodytes	82.02	1.00e-95	342.00
IUUC-Pan-092634	Papio anubis	82.10	3.00e-96	343.00
IUUC-Psi-093940	Pelodiscus sinensis	77.38	3.00e-84	303.00
IUUC-Pfo-097180	Poecilia formosa	62.24	2.00e-68	251.00
IUUC-Pab-097837	Pongo abelii	82.02	1.00e-95	342.00
IUUC-Pva-102648	Pteropus vampyrus	85.15	2.00e-102	364.00
IUUC-Rno-106098	Rattus norvegicus	85.53	7.00e-105	372.00
IUUC-Sha-107548	Sarcophilus harrisii	99.58	6.00e-130	456.00
IUUC-Sly-111303	Solanum lycopersicum	42.86	1.00e-08	53.10
IUUC-Ssc-116419	Sus scrofa	82.46	2.00e-96	344.00
IUUC-Tru-118619	Takifugu rubripes	67.54	7.00e-76	276.00
IUUC-Tni-120889	Tetraodon nigroviridis	67.11	7.00e-76	276.00
IUUC-Ttr-128475	Tursiops truncatus	81.66	2.00e-96	344.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence