iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098830

UUCD1 version

UUC-PoT-01545

Ensembl Protein ID

POPTR_0001s47520.1

UniProt Accession

B9GHJ6; B9GHJ6_POPTR

Genbank Protein ID

EEE83879.1; ERP67362.1

Protein Name

Ubiquitin conjugating-like enzyme family protein

Genbank Nucleotide ID

CM000337; CM000337

Gene Name

POPTRDRAFT_829971; POPTR_0001s47520g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s47520	POPTR_0001s47520.1	POPTR_0001s47520.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.30e-55	188.1	5	139
UBD/UBC-like/UBD_UBC	2.00e-73	246.1	5	142

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeek 91
           R++kelk+l+kdpp+++sa+pv + d+++w+++i+Gp+d+p++ggvF ++i+fp+dYPfkPPkv+f tk+fhPn+++nG++Cl+ilk  e+
   Q: 5    RINKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPADSPFAGGVFLVSIHFPPDYPFKPPKVSFRTKVFHPNINSNGSICLDILK--EQ 92
           89**********************.9************************************************************9..** PP
   S: 92   Wspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           Wspal++++vllsi+sll++pnp++pl  e+a+++k++r +y++++r
   Q: 93   WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRFKYETTAR 139
           *******************************************9987 PP

UBD/UBC-like/UBD_UBC

   S: 1    rikkelkdllrdeeaqisadlvdddlfelratiagppdspyeggvffltiklptdypfkppkvafitkiyhpninsngsicldilrsqwsa 91
           ri+kelkdl++d++a +sa++v dd+f+++ati+gp dsp+ ggvf + i++p dypfkppkv+f tk++hpninsngsicldil++qws+
   Q: 5    RINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPADSPFAGGVFLVSIHFPPDYPFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSP 95
           8****************************************************************************************** PP
   S: 92   altlskvllslcslladaepddplvaeiariyktdkekykriarewt 138
           alt+skvlls+csll+d++pddplv+eia++yktd+ ky+ +ar wt
   Q: 96   ALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRFKYETTARSWT 142
           **********************************************8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MASKRINKEL KDLQKDPPAS CSAGPVADDM FHWQATIMGP ADSPFAGGVF LVSIHFPPDY 60
PFKPPKVSFR TKVFHPNINS NGSICLDILK EQWSPALTIS KVLLSICSLL TDPNPDDPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGACAGAGA CAGACCGCCA CAAGGCAACT TAGGATTCTC TCCTTTTTTA ATTTACTTTC 60
CTCTTTTACT ATATTTTTAT AAAACACAAA ACTCTCTTCT CTTTTTCTCT CTGTCACCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding

KEGG

pop:POPTR_0001s47520g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-016512	Brassica oleracea	94.59	5.00e-83	298.00
IUUC-Bra-017985	Brassica rapa	94.59	5.00e-83	298.00
IUUC-Csv-025835	Ciona savignyi	75.34	6.00e-57	212.00
IUUC-Fca-035917	Felis catus	80.27	3.00e-70	256.00
IUUC-Gga-041015	Gallus gallus	80.27	4.00e-70	256.00
IUUC-Gma-043766	Glycine max	96.62	1.00e-82	297.00
IUUC-Mtr-057667	Medicago truncatula	95.95	7.00e-83	298.00
IUUC-Mmr-060889	Microcebus murinus	80.27	4.00e-70	256.00
IUUC-Mmu-063796	Mus musculus	80.27	4.00e-70	256.00
IUUC-Oar-090038	Ovis aries	80.27	3.00e-70	256.00
IUUC-Psi-094076	Pelodiscus sinensis	80.27	3.00e-70	256.00
IUUC-Ppe-101431	Prunus persica	97.97	1.00e-84	304.00
IUUC-Rno-105498	Rattus norvegicus	80.27	3.00e-70	256.00
IUUC-Tgu-116727	Taeniopygia guttata	80.27	3.00e-70	256.00
IUUC-Tca-121385	Theobroma cacao	97.30	8.00e-84	301.00
IUUC-Uma-129648	Ustilago maydis	80.95	1.00e-71	261.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence