iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108911

UUCD1 version

UUC-SeM-01331

Ensembl Protein ID

EFJ27529

UniProt Accession

D8QWU7; D8QWU7_SELML

Genbank Protein ID

EFJ27529.1; EFJ35297.1

Protein Name

Ubiquitin-conjugating enzyme 28, E2

Genbank Nucleotide ID

GL377582; GL377568

Gene Name

UBC28-4; UBC28-3; SELMODRAFT_270384; SELMODRAFT_270923

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_270923	EFJ27529	EFJ27529

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.30e-56	191.0	5	139
UBD/UBC-like/UBD_UBC	5.20e-75	250.8	5	142

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekWspalsvesv 101
           R+ kelk+l+kdpp+++sa+pv e d+++w+++i+Gp+d+pY+ggvF ++i+fp+dYPfkPPkv f tk+fhPn+++nG++Cl+ilk  e+Wspal++++v
   Q: 5    RILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK--EQWSPALTISKV 102
           899*********************.9************************************************************9..************ PP
   S: 102  llsiqsllaepnpesplneeaaellkknreeykkkvr 138
           llsi+sll++pnp++pl  e+a+++k++r +y++++r
   Q: 103  LLSICSLLTDPNPDDPLVPEIAHMYKTDRPKYESTAR 139
           *********************************9987 PP

UBD/UBC-like/UBD_UBC

   S: 1    rikkelkdllrdeeaqisadlvdddlfelratiagppdspyeggvffltiklptdypfkppkvafitkiyhpninsngsicldilrsqwsaaltlskvlls 101
           ri kelkdl++d+++ +sa++v +d+f+++ati+gppdspy ggvf +ti++p dypfkppkvaf tk++hpninsngsicldil++qws+alt+skvlls
   Q: 5    RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLS 105
           899************************************************************************************************** PP
   S: 102  lcslladaepddplvaeiariyktdkekykriarewt 138
           +csll+d++pddplv+eia++yktd+ ky+ +ar+wt
   Q: 106  ICSLLTDPNPDDPLVPEIAHMYKTDRPKYESTARNWT 142
           ************************************8 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP PDSPYAGGVF LVTIHFPPDY 60
PFKPPKVAFR TKVFHPNINS NGSICLDILK EQWSPALTIS KVLLSICSLL TDPNPDDPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTCCA AGAGAATCCT CAAGGAATTG AAGGACTTGC AGAAGGATCC GCCCACGTCG 60
TGCAGCGCAG GTGAGCGCGC GCCACAAAAT CCATGGGATT TTGATGTCGG GATTTTCCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding

KEGG

smo:SELMODRAFT_270384; smo:SELMODRAFT_270923

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007647	Arabidopsis thaliana	96.62	3.00e-83	299.00
IUUC-Acl-008266	Aspergillus clavatus	80.27	2.00e-71	260.00
IUUC-Afu-008956	Aspergillus fumigatus	80.95	8.00e-72	261.00
IUUC-Ani-009401	Aspergillus nidulans	80.95	6.00e-72	261.00
IUUC-Ang-009725	Aspergillus niger	80.00	5.00e-61	225.00
IUUC-Ame-011566	Astyanax mexicanus	79.59	3.00e-70	256.00
IUUC-Bol-016243	Brassica oleracea	97.30	2.00e-83	300.00
IUUC-Bra-016748	Brassica rapa	95.95	4.00e-84	305.00
IUUC-Cpo-021714	Cavia porcellus	79.59	2.00e-68	250.00
IUUC-Cre-022765	Chlamydomonas reinhardtii	85.14	8.00e-75	271.00
IUUC-Csv-026311	Ciona savignyi	74.66	2.00e-64	236.00
IUUC-Dre-028686	Danio rerio	81.63	6.00e-71	258.00
IUUC-Dor-030323	Dipodomys ordii	80.27	5.00e-70	255.00
IUUC-Fca-035917	Felis catus	80.27	2.00e-69	253.00
IUUC-Fal-036904	Ficedula albicollis	80.71	4.00e-67	245.00
IUUC-Gmo-038775	Gadus morhua	79.59	8.00e-71	257.00
IUUC-Gma-043923	Glycine max	98.65	1.00e-84	303.00
IUUC-Ggo-045361	Gorilla gorilla	80.95	2.00e-70	256.00
IUUC-Hsa-045934	Homo sapiens	80.95	2.00e-70	256.00
IUUC-Lpe-051194	Leersia perrieri	95.27	2.00e-83	300.00
IUUC-Loc-052838	Lepisosteus oculatus	80.95	2.00e-70	256.00
IUUC-Mcc-055421	Macaca mulatta	80.95	2.00e-70	256.00
IUUC-Meu-056462	Macropus eugenii	79.14	3.00e-65	239.00
IUUC-Mvi-060397	Microbotryum violaceum	79.59	4.00e-70	255.00
IUUC-Mmr-060889	Microcebus murinus	80.27	2.00e-69	253.00
IUUC-Mlu-067573	Myotis lucifugus	77.14	7.00e-66	241.00
IUUC-Nfi-068599	Neosartorya fischeri	80.95	8.00e-72	261.00
IUUC-Nle-069715	Nomascus leucogenys	80.95	2.00e-70	256.00
IUUC-Opr-070191	Ochotona princeps	80.58	2.00e-66	243.00
IUUC-Oan-073026	Ornithorhynchus anatinus	80.71	2.00e-67	247.00
IUUC-Oba-075924	Oryza barthii	95.27	5.00e-83	298.00
IUUC-Ogu-078581	Oryza glumaepatula	95.27	5.00e-83	298.00
IUUC-Ome-081967	Oryza meridionalis	95.27	7.00e-83	298.00
IUUC-Oni-082445	Oryza nivara	95.27	5.00e-83	298.00
IUUC-Ola-087515	Oryzias latipes	80.27	5.00e-70	255.00
IUUC-Oar-090038	Ovis aries	80.27	2.00e-69	253.00
IUUC-Psi-094076	Pelodiscus sinensis	80.27	2.00e-69	253.00
IUUC-Ppa-095442	Physcomitrella patens	98.65	8.00e-85	304.00
IUUC-Pfo-096867	Poecilia formosa	80.27	5.00e-70	255.00
IUUC-Pop-099586	Populus trichocarpa	97.97	2.00e-84	303.00
IUUC-Rno-105498	Rattus norvegicus	80.27	2.00e-69	253.00
IUUC-Sce-106463	Saccharomyces cerevisiae	79.45	1.00e-71	260.00
IUUC-Sit-110205	Setaria italica	95.27	6.00e-83	298.00
IUUC-Stu-112764	Solanum tuberosum	97.97	2.00e-84	302.00
IUUC-Sbi-114257	Sorghum bicolor	95.95	3.00e-83	298.00
IUUC-Ssc-115391	Sus scrofa	80.95	2.00e-70	256.00
IUUC-Tgu-116727	Taeniopygia guttata	80.27	2.00e-69	253.00
IUUC-Tru-118272	Takifugu rubripes	80.27	7.00e-69	251.00
IUUC-Tni-120056	Tetraodon nigroviridis	80.27	7.00e-69	251.00
IUUC-Tca-121008	Theobroma cacao	97.97	2.00e-84	303.00
IUUC-Tre-122125	Trichoderma reesei	80.95	3.00e-71	259.00
IUUC-Tvi-122296	Trichoderma virens	80.95	3.00e-71	259.00
IUUC-Xma-133673	Xiphophorus maculatus	80.95	2.00e-70	256.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence