iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131004

UUCD1 version

UUC-ViV-00239

Ensembl Protein ID

VIT_08s0007g03360.t01

UniProt Accession

D7TJ66; D7TJ66_VITVI

Genbank Protein ID

CBI30292.3

Protein Name

Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog

Genbank Nucleotide ID

FN595991

Gene Name

VIT_08s0007g03360

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_08s0007g03360	VIT_08s0007g03360.t01	VIT_08s0007g03360.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-46	154.7	18	48
UBD/Beta-Prp	3.60e-53	181.2	60	184

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+d+v++la+ ++ tll+s+s+D+t+++W 
   Q: 18   GHNDKVWSLAWnPTsTLLASCSGDKTVRIWQ 48
           8***********777***************5 PP

UBD/Beta-Prp

   S: 46   rsl.sgheaevtavkfspdgkilvtgseDrtikvwdls..tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcle 130
           + l + h+ +v+++ +sp+gk+l+t+s D+t  +w+l   +++cv+tl+ghe++v s+s+++sg+ l++ s+d+ + +w+++ g ++e
   Q: 60   AVLeETHTRTVRSCAWSPSGKLLATASFDATTAIWELIgdDFECVSTLEGHENEVKSVSWNASGSLLATCSRDKSVWIWEVQPGNEFE 147
           5566789999999999999999999999999999999878999999999999999999999999999999999999999999887776 PP
   S: 131  e..tlsghdgvvncvvvhpdgnllvsGslDrtvrlWd 165
              +l+gh++ v +v++hp  ++l+s+s+D+tv++W 
   Q: 148  CvsVLQGHTQDVKMVQWHPIMDVLFSCSYDNTVKIWA 184
           5669999999999999999999999999999999995 PP

Organism

Vitis vinifera

Functional Description
(View)

Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins.

Protein Sequence
(Fasta)

MDFSEEGLEL KEIQRLEGHN DKVWSLAWNP TSTLLASCSG DKTVRIWQRS PSTSSWHCKA 60
VLEETHTRTV RSCAWSPSGK LLATASFDAT TAIWELIGDD FECVSTLEGH ENEVKSVSWN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAAAAAGCG GTGTTGCCAC AAGCTAACGC GATCCTTCAC CGATTTGCGC GTGTTTCGAA 60
GTCTACTCAC TCGTGAACTC TTTTCATAGC ACCAAAAGCC CAAACTCTCC CTCCCTCCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR028608--CIAO1/Cia1
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0097361--C:CIA complex
GO:0016226--P:iron-sulfur cluster assembly

KEGG

vvi:100256192

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000874	Aegilops tauschii	70.68	5.00e-109	387.00
IUUC-Aml-001317	Ailuropoda melanoleuca	54.05	1.00e-83	301.00
IUUC-Atr-003029	Amborella trichopoda	72.67	7.00e-149	518.00
IUUC-Aly-006458	Arabidopsis lyrata	72.86	7.00e-152	528.00
IUUC-Ath-006671	Arabidopsis thaliana	72.86	1.00e-151	528.00
IUUC-Ago-007820	Ashbya gossypii	38.71	6.00e-55	206.00
IUUC-Acl-008042	Aspergillus clavatus	31.22	2.00e-46	179.00
IUUC-Afl-008639	Aspergillus flavus	32.39	8.00e-45	173.00
IUUC-Afu-008899	Aspergillus fumigatus	31.39	6.00e-44	171.00
IUUC-Ani-009453	Aspergillus nidulans	32.32	5.00e-43	167.00
IUUC-Ang-009758	Aspergillus niger	39.61	3.00e-39	154.00
IUUC-Aor-010212	Aspergillus oryzae	32.39	8.00e-45	173.00
IUUC-Ate-010314	Aspergillus terreus	32.85	2.00e-45	175.00
IUUC-Ame-010676	Astyanax mexicanus	52.55	2.00e-93	335.00
IUUC-Bgr-012095	Blumeria graminis	28.16	6.00e-34	137.00
IUUC-Bta-012884	Bos taurus	53.75	7.00e-84	302.00
IUUC-Bdi-014614	Brachypodium distachyon	68.62	7.00e-139	485.00
IUUC-Bol-016439	Brassica oleracea	73.78	1.00e-142	498.00
IUUC-Bra-016830	Brassica rapa	73.04	1.00e-142	498.00
IUUC-Cel-018709	Caenorhabditis elegans	38.65	2.00e-57	214.00
IUUC-Cja-019822	Callithrix jacchus	53.15	9.00e-83	299.00
IUUC-Cfa-020823	Canis familiaris	54.35	2.00e-84	304.00
IUUC-Cre-022811	Chlamydomonas reinhardtii	49.86	9.00e-92	329.00
IUUC-Csa-023754	Chlorocebus sabaeus	53.45	3.00e-83	301.00
IUUC-Cin-025395	Ciona intestinalis	44.51	6.00e-78	283.00
IUUC-Csv-025943	Ciona savignyi	45.27	1.00e-77	282.00
IUUC-Cgl-026435	Colletotrichum gloeosporioides	28.44	7.00e-31	127.00
IUUC-Cne-026939	Cryptococcus neoformans	30.02	1.00e-49	189.00
IUUC-Cme-027239	Cyanidioschyzon merolae	40.60	2.00e-45	176.00
IUUC-Dre-028172	Danio rerio	50.89	4.00e-92	330.00
IUUC-Dno-029472	Dasypus novemcinctus	54.14	1.00e-72	265.00
IUUC-Dor-031134	Dipodomys ordii	45.65	5.00e-65	240.00
IUUC-Dse-031535	Dothistroma septosporum	28.70	3.00e-38	152.00
IUUC-Dme-032020	Drosophila melanogaster	51.52	3.00e-93	333.00
IUUC-Eca-033700	Equus caballus	53.75	1.00e-83	301.00
IUUC-Eeu-035010	Erinaceus europaeus	51.35	3.00e-77	280.00
IUUC-Fca-036309	Felis catus	48.20	8.00e-77	279.00
IUUC-Fal-037243	Ficedula albicollis	54.55	4.00e-55	206.00
IUUC-Fox-038058	Fusarium oxysporum	31.54	8.00e-37	147.00
IUUC-Fso-038459	Fusarium solani	30.67	1.00e-34	140.00
IUUC-Gmo-039375	Gadus morhua	50.46	9.00e-85	305.00
IUUC-Ggr-040002	Gaeumannomyces graminis	34.35	1.00e-38	153.00
IUUC-Gga-040294	Gallus gallus	52.54	2.00e-66	244.00
IUUC-Gac-042499	Gasterosteus aculeatus	51.94	4.00e-81	293.00
IUUC-Gma-043543	Glycine max	78.59	1.00e-161	561.00
IUUC-Ggo-045181	Gorilla gorilla	53.45	3.00e-83	301.00
IUUC-Hsa-046528	Homo sapiens	53.45	3.00e-83	301.00
IUUC-Hvu-047341	Hordeum vulgare	73.00	2.00e-83	300.00
IUUC-Itr-048790	Ictidomys tridecemlineatus	53.45	1.00e-83	302.00
IUUC-Kpa-049353	Komagataella pastoris	36.19	7.00e-52	196.00
IUUC-Lch-049763	Latimeria chalumnae	51.34	3.00e-84	303.00
IUUC-Lpe-051500	Leersia perrieri	63.73	1.00e-132	464.00
IUUC-Loc-052021	Lepisosteus oculatus	52.80	2.00e-81	295.00
IUUC-Lma-053331	Leptosphaeria maculans	31.14	3.00e-42	166.00
IUUC-Laf-054558	Loxodonta africana	52.55	1.00e-81	295.00
IUUC-Mcc-055374	Macaca mulatta	53.75	1.00e-83	301.00
IUUC-Meu-056042	Macropus eugenii	59.81	5.00e-57	213.00
IUUC-Mor-057187	Magnaporthe oryzae	31.82	4.00e-41	161.00
IUUC-Mtr-058072	Medicago truncatula	77.84	3.00e-162	563.00
IUUC-Mla-059108	Melampsora laricipopulina	33.56	4.00e-57	214.00
IUUC-Mga-059370	Meleagris gallopavo	39.82	1.00e-46	179.00
IUUC-Mvi-060495	Microbotryum violaceum	37.50	4.00e-59	221.00
IUUC-Mmr-060902	Microcebus murinus	53.15	9.00e-84	302.00
IUUC-Mdo-062510	Monodelphis domestica	53.75	3.00e-82	297.00
IUUC-Mmu-063575	Mus musculus	54.08	4.00e-84	303.00
IUUC-Mac-065322	Musa acuminata	75.36	6.00e-157	545.00
IUUC-Mpu-065925	Mustela putorius furo	54.05	4.00e-84	303.00
IUUC-Mlu-067755	Myotis lucifugus	53.12	5.00e-83	300.00
IUUC-Nfi-068327	Neosartorya fischeri	31.56	4.00e-43	167.00
IUUC-Ncr-068845	Neurospora crassa	28.60	2.00e-28	119.00
IUUC-Nle-069406	Nomascus leucogenys	53.15	2.00e-81	295.00
IUUC-Opr-070416	Ochotona princeps	65.81	3.00e-44	171.00
IUUC-Ont-071936	Oreochromis niloticus	50.89	4.00e-82	296.00
IUUC-Oan-073452	Ornithorhynchus anatinus	55.56	7.00e-39	152.00
IUUC-Ocu-074791	Oryctolagus cuniculus	53.45	8.00e-84	302.00
IUUC-Oba-075636	Oryza barthii	69.91	2.00e-138	484.00
IUUC-Obr-076742	Oryza brachyantha	71.02	2.00e-118	417.00
IUUC-Ogl-077766	Oryza glaberrima	69.91	2.00e-138	484.00
IUUC-Ogu-079039	Oryza glumaepatula	69.91	1.00e-138	484.00
IUUC-Oin-079315	Oryza indica	72.66	2.00e-123	434.00
IUUC-Olo-080669	Oryza longistaminata	60.93	9.00e-130	455.00
IUUC-Ome-081490	Oryza meridionalis	70.00	6.00e-139	486.00
IUUC-Oni-082572	Oryza nivara	69.91	2.00e-138	484.00
IUUC-Opu-083732	Oryza punctata	70.00	8.00e-138	482.00
IUUC-Oru-084763	Oryza rufipogon	69.91	2.00e-138	484.00
IUUC-Osa-085372	Oryza sativa	69.91	2.00e-138	484.00
IUUC-Ola-087379	Oryzias latipes	51.50	9.00e-82	296.00
IUUC-Olu-087801	Ostreococcus lucimarinus	40.24	5.00e-61	226.00
IUUC-Oga-089076	Otolemur garnettii	53.45	1.00e-83	302.00
IUUC-Oar-090022	Ovis aries	53.75	8.00e-84	302.00
IUUC-Ptr-090809	Pan troglodytes	53.45	3.00e-83	301.00
IUUC-Pan-091685	Papio anubis	53.45	3.00e-84	305.00
IUUC-Psi-093046	Pelodiscus sinensis	52.25	7.00e-82	296.00
IUUC-Pma-094181	Petromyzon marinus	49.56	4.00e-89	320.00
IUUC-Pno-094882	Phaeosphaeria nodorum	30.50	5.00e-41	160.00
IUUC-Ppa-095172	Physcomitrella patens	60.00	1.00e-117	415.00
IUUC-Pfo-096396	Poecilia formosa	51.35	2.00e-83	301.00
IUUC-Pab-098427	Pongo abelii	53.61	9.00e-84	302.00
IUUC-Pop-100016	Populus trichocarpa	79.37	3.00e-165	573.00
IUUC-Pca-101048	Procavia capensis	52.85	6.00e-82	296.00
IUUC-Ppe-102050	Prunus persica	79.01	4.00e-161	559.00
IUUC-Pva-103117	Pteropus vampyrus	53.75	8.00e-84	302.00
IUUC-Pgr-103307	Puccinia graminis	35.09	3.00e-61	228.00
IUUC-Ptt-103938	Puccinia triticina	39.14	1.00e-48	186.00
IUUC-Pte-104315	Pyrenophora teres	29.88	1.00e-41	162.00
IUUC-Pyt-104825	Pyrenophora triticirepentis	29.88	3.00e-41	161.00
IUUC-Rno-105523	Rattus norvegicus	54.38	2.00e-84	304.00
IUUC-Sce-106297	Saccharomyces cerevisiae	39.23	9.00e-53	199.00
IUUC-Sha-106981	Sarcophilus harrisii	54.33	2.00e-70	258.00
IUUC-Sja-107715	Schizosaccharomyces japonicus	40.74	1.00e-61	229.00
IUUC-Spo-108214	Schizosaccharomyces pombe	38.51	7.00e-60	224.00
IUUC-Smo-109034	Selaginella moellendorffii	53.22	2.00e-106	377.00
IUUC-Sit-110663	Setaria italica	70.88	5.00e-143	499.00
IUUC-Sly-110898	Solanum lycopersicum	75.14	3.00e-149	520.00
IUUC-Stu-112647	Solanum tuberosum	75.72	4.00e-123	432.00
IUUC-Sbi-114288	Sorghum bicolor	69.41	1.00e-137	481.00
IUUC-Sre-115065	Sporisorium reilianum	40.14	4.00e-73	267.00
IUUC-Ssc-115960	Sus scrofa	50.75	4.00e-86	310.00
IUUC-Tru-118382	Takifugu rubripes	52.40	4.00e-95	340.00
IUUC-Tsy-119585	Tarsius syrichta	47.75	8.00e-70	256.00
IUUC-Tni-120133	Tetraodon nigroviridis	51.34	7.00e-88	316.00
IUUC-Tca-121167	Theobroma cacao	78.29	3.00e-157	546.00
IUUC-Tre-122119	Trichoderma reesei	28.74	3.00e-39	155.00
IUUC-Tae-125748	Triticum aestivum	68.53	3.00e-134	470.00
IUUC-Tur-126682	Triticum urartu	72.03	2.00e-110	390.00
IUUC-Tme-127095	Tuber melanosporum	34.94	5.00e-54	203.00
IUUC-Tbe-128004	Tupaia belangeri	53.75	1.00e-83	302.00
IUUC-Ttr-129284	Tursiops truncatus	52.40	1.00e-80	291.00
IUUC-Uma-129527	Ustilago maydis	40.00	9.00e-74	270.00
IUUC-Vda-129854	Verticillium dahliae	30.40	2.00e-35	142.00
IUUC-Vpa-130681	Vicugna pacos	72.32	1.00e-32	132.00
IUUC-Xtr-131928	Xenopus tropicalis	51.81	2.00e-82	297.00
IUUC-Xma-134290	Xiphophorus maculatus	51.48	4.00e-82	296.00
IUUC-Yli-134364	Yarrowia lipolytica	42.29	1.00e-63	235.00
IUUC-Zma-135658	Zea mays	70.76	2.00e-139	488.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence