iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-003832

Ensembl Protein ID

ENSAPLP00000007555.1

UniProt Accession

R0K5M4; R0K5M4_ANAPL

Genbank Protein ID

EOB05446.1

Protein Name

DNA damage-binding protein 2

Genbank Nucleotide ID

ADON01035500

Gene Name

DDB2; Anapl_06575

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000007909.1	ENSAPLT00000008218.1	ENSAPLP00000007555.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-11	44.3	261	294

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           H+ +v+ ++f   + +ll+++s D t+k+WDlr 
   Q: 261  HKKKVSHVEFnsRCeWLLATASVDQTVKIWDLRN 294
           8889999***984469***************986 PP

Organism

Anas platyrhynchos

Protein Sequence
(Fasta)

MAPVNQPKDK KHERAHEYWS EEAKSSGKRK LDCKELENEP LARKLFLRKT SKPLEKIGRS 60
GGGSVTRNTR ALFHQLERQC SIVHYVYQNK LGGSIRAQLR QCLQLPFLRS LTSYRLFRTA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCCAG TAAATCAGCC AAAGGACAAG AAGCATGAGA GGGCGCATGA GTATTGGTCA 60
GAAGAGGCAA AATCGTCTGG GAAAAGGAAA CTGGACTGCA AGGAACTAGA GAACGAACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030054--C:cell junction
GO:0031465--C:Cul4B-RING E3 ubiquitin ligase complex
GO:0005654--C:nucleoplasm
GO:0043234--C:protein complex
GO:0003684--F:damaged DNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0035518--P:histone H2A monoubiquitination
GO:0051865--P:protein autoubiquitination
GO:0000209--P:protein polyubiquitination
GO:0006290--P:pyrimidine dimer repair
GO:0070914--P:UV-damage excision repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	31.06	2.00e-36	146.00
IUUC-Aml-002203	Ailuropoda melanoleuca	59.35	6.00e-132	463.00
IUUC-Atr-002957	Amborella trichopoda	34.91	2.00e-41	163.00
IUUC-Aca-004358	Anolis carolinensis	76.72	0.00e+00	773.00
IUUC-Aly-006296	Arabidopsis lyrata	33.63	6.00e-42	165.00
IUUC-Ath-007115	Arabidopsis thaliana	34.11	2.00e-43	169.00
IUUC-Ame-010817	Astyanax mexicanus	56.10	2.00e-142	498.00
IUUC-Bta-012914	Bos taurus	51.32	9.00e-131	459.00
IUUC-Bdi-014261	Brachypodium distachyon	30.73	4.00e-37	149.00
IUUC-Bol-015317	Brassica oleracea	33.84	5.00e-42	165.00
IUUC-Bra-016848	Brassica rapa	33.84	7.00e-42	164.00
IUUC-Cja-018967	Callithrix jacchus	58.42	3.00e-130	457.00
IUUC-Cfa-021238	Canis familiaris	58.82	3.00e-125	441.00
IUUC-Cpo-022063	Cavia porcellus	59.23	8.00e-130	456.00
IUUC-Csa-023382	Chlorocebus sabaeus	58.97	1.00e-130	459.00
IUUC-Cho-024805	Choloepus hoffmanni	42.75	8.00e-51	193.00
IUUC-Dre-028732	Danio rerio	66.21	7.00e-151	526.00
IUUC-Dor-030461	Dipodomys ordii	67.57	1.00e-93	336.00
IUUC-Ete-033038	Echinops telfairi	49.44	1.00e-122	432.00
IUUC-Eca-033772	Equus caballus	59.78	6.00e-125	440.00
IUUC-Eeu-034662	Erinaceus europaeus	51.79	3.00e-31	129.00
IUUC-Fca-036095	Felis catus	58.86	2.00e-125	441.00
IUUC-Gmo-039683	Gadus morhua	59.55	1.00e-144	505.00
IUUC-Gga-040530	Gallus gallus	94.08	0.00e+00	931.00
IUUC-Gac-041517	Gasterosteus aculeatus	62.26	5.00e-138	483.00
IUUC-Gma-043378	Glycine max	33.63	2.00e-41	163.00
IUUC-Ggo-045364	Gorilla gorilla	59.51	1.00e-131	462.00
IUUC-Hsa-046354	Homo sapiens	52.63	1.00e-131	462.00
IUUC-Hvu-047151	Hordeum vulgare	32.23	1.00e-29	123.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	59.78	8.00e-131	459.00
IUUC-Lpe-051256	Leersia perrieri	32.15	4.00e-36	145.00
IUUC-Loc-052398	Lepisosteus oculatus	61.02	8.00e-154	536.00
IUUC-Laf-053562	Loxodonta africana	53.38	3.00e-127	447.00
IUUC-Mcc-055197	Macaca mulatta	58.74	2.00e-101	362.00
IUUC-Meu-056151	Macropus eugenii	60.42	1.00e-101	362.00
IUUC-Mtr-057940	Medicago truncatula	31.50	4.00e-42	165.00
IUUC-Mga-059923	Meleagris gallopavo	92.11	0.00e+00	936.00
IUUC-Mmr-061465	Microcebus murinus	62.09	2.00e-102	365.00
IUUC-Mdo-063063	Monodelphis domestica	63.09	1.00e-146	512.00
IUUC-Mmu-064294	Mus musculus	59.28	2.00e-128	452.00
IUUC-Mac-065598	Musa acuminata	32.94	1.00e-35	144.00
IUUC-Mpu-066831	Mustela putorius furo	53.24	3.00e-128	451.00
IUUC-Mlu-067222	Myotis lucifugus	52.03	4.00e-127	447.00
IUUC-Nle-069581	Nomascus leucogenys	58.97	5.00e-131	460.00
IUUC-Opr-070644	Ochotona princeps	58.29	2.00e-126	444.00
IUUC-Ont-072605	Oreochromis niloticus	60.38	6.00e-134	470.00
IUUC-Oan-072973	Ornithorhynchus anatinus	69.21	1.00e-144	505.00
IUUC-Ocu-074615	Oryctolagus cuniculus	58.15	4.00e-129	454.00
IUUC-Oba-075283	Oryza barthii	30.22	5.00e-36	145.00
IUUC-Obr-076605	Oryza brachyantha	30.88	5.00e-38	152.00
IUUC-Ogl-077512	Oryza glaberrima	30.22	5.00e-36	145.00
IUUC-Ogu-078329	Oryza glumaepatula	30.22	5.00e-36	145.00
IUUC-Oin-079980	Oryza indica	30.22	4.00e-36	145.00
IUUC-Olo-080516	Oryza longistaminata	29.95	1.00e-35	144.00
IUUC-Ome-081415	Oryza meridionalis	30.22	6.00e-36	145.00
IUUC-Oni-082985	Oryza nivara	30.22	4.00e-36	145.00
IUUC-Opu-084159	Oryza punctata	30.22	3.00e-36	146.00
IUUC-Oru-085137	Oryza rufipogon	30.22	4.00e-36	145.00
IUUC-Osa-085614	Oryza sativa	30.22	3.00e-36	145.00
IUUC-Ola-087044	Oryzias latipes	57.45	1.00e-137	483.00
IUUC-Oga-088274	Otolemur garnettii	56.47	4.00e-134	470.00
IUUC-Oar-089826	Ovis aries	57.61	2.00e-129	454.00
IUUC-Ptr-091631	Pan troglodytes	52.63	1.00e-131	462.00
IUUC-Pan-092535	Papio anubis	58.97	2.00e-131	461.00
IUUC-Psi-093815	Pelodiscus sinensis	84.63	0.00e+00	799.00
IUUC-Pma-094474	Petromyzon marinus	55.69	4.00e-121	427.00
IUUC-Ppa-095414	Physcomitrella patens	33.43	1.00e-38	154.00
IUUC-Pfo-096559	Poecilia formosa	60.66	6.00e-140	490.00
IUUC-Pab-098528	Pongo abelii	59.24	2.00e-131	461.00
IUUC-Pop-100064	Populus trichocarpa	32.57	4.00e-40	158.00
IUUC-Pca-100803	Procavia capensis	59.35	1.00e-124	439.00
IUUC-Ppe-101966	Prunus persica	34.95	2.00e-42	166.00
IUUC-Pva-103213	Pteropus vampyrus	58.13	8.00e-125	439.00
IUUC-Rno-105087	Rattus norvegicus	54.55	2.00e-127	448.00
IUUC-Sha-107466	Sarcophilus harrisii	63.54	1.00e-144	505.00
IUUC-Smo-108958	Selaginella moellendorffii	31.72	6.00e-37	148.00
IUUC-Sit-109968	Setaria italica	31.62	8.00e-35	141.00
IUUC-Sly-111495	Solanum lycopersicum	32.45	5.00e-38	152.00
IUUC-Sar-113272	Sorex araneus	58.94	4.00e-121	427.00
IUUC-Sbi-114706	Sorghum bicolor	28.49	2.00e-31	130.00
IUUC-Ssc-115437	Sus scrofa	51.67	3.00e-125	441.00
IUUC-Tgu-116602	Taeniopygia guttata	85.34	0.00e+00	792.00
IUUC-Tru-118698	Takifugu rubripes	60.00	8.00e-125	439.00
IUUC-Tsy-119027	Tarsius syrichta	57.32	7.00e-111	393.00
IUUC-Tni-119787	Tetraodon nigroviridis	60.72	2.00e-134	472.00
IUUC-Tca-121447	Theobroma cacao	32.26	2.00e-41	163.00
IUUC-Tae-123253	Triticum aestivum	31.57	1.00e-37	150.00
IUUC-Tur-126724	Triticum urartu	31.31	9.00e-37	147.00
IUUC-Tme-126958	Tuber melanosporum	25.37	5.00e-13	68.60
IUUC-Tbe-127680	Tupaia belangeri	56.74	2.00e-92	332.00
IUUC-Ttr-128201	Tursiops truncatus	44.20	2.00e-99	355.00
IUUC-Vpa-130451	Vicugna pacos	70.00	1.00e-26	113.00
IUUC-Vvi-131001	Vitis vinifera	35.67	6.00e-46	178.00
IUUC-Xtr-132266	Xenopus tropicalis	66.67	1.00e-157	548.00
IUUC-Xma-133034	Xiphophorus maculatus	58.20	5.00e-130	457.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence