iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mlu-067222

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAPE02024186

Gene Name

DDB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMLUG00000017642.1	ENSMLUT00000017646.1	ENSMLUP00000016091.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.60e-12	45.5	246	274

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf...sdtllvsGsdDgtikvWDlrt 32
           t  a+    d++l+++s D t+k+WDlr+
   Q: 246  THAALnpcCDWFLATASVDQTVKIWDLRQ 274
           555555433369**************986 PP

Organism

Myotis lucifugus

Protein Sequence
(Fasta)

MAPKKRPETR KPLEMVVCPK SKKSRSPREL EPAAKKLCVK GPGCSRRSDS GCLRERLTSL 60
QVPPQCRSIV RALHHHKLGR TAWPSLQKDL QQSFLHSLAS YRISQKAAPF DRRATSLTWH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCCCCA AGAAACGCCC AGAGACCCGG AAGCCCCTCG AGATGGTGGT GTGCCCCAAG 60
AGCAAGAAGA GCAGGAGCCC CCGGGAGCTG GAGCCCGCGG CCAAGAAGCT CTGTGTGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030054--C:cell junction
GO:0031465--C:Cul4B-RING E3 ubiquitin ligase complex
GO:0005654--C:nucleoplasm
GO:0043234--C:protein complex
GO:0003684--F:damaged DNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0035518--P:histone H2A monoubiquitination
GO:0051865--P:protein autoubiquitination
GO:0000209--P:protein polyubiquitination
GO:0006290--P:pyrimidine dimer repair
GO:0070914--P:UV-damage excision repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	30.15	1.00e-29	124.00
IUUC-Aml-002203	Ailuropoda melanoleuca	87.74	0.00e+00	747.00
IUUC-Atr-002957	Amborella trichopoda	31.38	6.00e-35	142.00
IUUC-Apl-003832	Anas platyrhynchos	52.03	2.00e-120	425.00
IUUC-Aca-004358	Anolis carolinensis	52.44	1.00e-126	446.00
IUUC-Aly-006296	Arabidopsis lyrata	31.19	5.00e-33	135.00
IUUC-Ath-007115	Arabidopsis thaliana	30.89	4.00e-34	139.00
IUUC-Ago-007715	Ashbya gossypii	22.22	2.00e-10	60.80
IUUC-Ame-010817	Astyanax mexicanus	54.37	2.00e-120	425.00
IUUC-Bta-012914	Bos taurus	86.65	0.00e+00	764.00
IUUC-Bdi-014261	Brachypodium distachyon	30.72	1.00e-30	127.00
IUUC-Bol-015317	Brassica oleracea	30.67	6.00e-34	139.00
IUUC-Bra-016848	Brassica rapa	30.67	6.00e-34	138.00
IUUC-Cja-018967	Callithrix jacchus	82.98	0.00e+00	705.00
IUUC-Cfa-021238	Canis familiaris	88.65	0.00e+00	727.00
IUUC-Cpo-022063	Cavia porcellus	78.07	0.00e+00	682.00
IUUC-Csa-023382	Chlorocebus sabaeus	82.51	0.00e+00	733.00
IUUC-Cho-024805	Choloepus hoffmanni	59.49	9.00e-90	323.00
IUUC-Dre-028732	Danio rerio	49.58	7.00e-108	384.00
IUUC-Dor-030461	Dipodomys ordii	76.74	3.00e-120	424.00
IUUC-Ete-033038	Echinops telfairi	71.43	2.00e-178	618.00
IUUC-Eca-033772	Equus caballus	86.42	0.00e+00	719.00
IUUC-Eeu-034662	Erinaceus europaeus	63.50	8.00e-66	244.00
IUUC-Fca-036095	Felis catus	87.35	0.00e+00	731.00
IUUC-Fso-038198	Fusarium solani	28.43	2.00e-12	67.00
IUUC-Gmo-039683	Gadus morhua	49.72	1.00e-104	373.00
IUUC-Gga-040530	Gallus gallus	52.25	7.00e-121	427.00
IUUC-Gac-041517	Gasterosteus aculeatus	50.41	1.00e-98	353.00
IUUC-Gma-043378	Glycine max	31.89	6.00e-36	145.00
IUUC-Ggo-045364	Gorilla gorilla	83.22	0.00e+00	736.00
IUUC-Hsa-046354	Homo sapiens	83.22	0.00e+00	735.00
IUUC-Hvu-047151	Hordeum vulgare	31.39	1.00e-26	113.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	82.34	0.00e+00	714.00
IUUC-Lpe-051256	Leersia perrieri	30.06	3.00e-29	123.00
IUUC-Loc-052398	Lepisosteus oculatus	54.19	7.00e-123	434.00
IUUC-Laf-053562	Loxodonta africana	82.90	0.00e+00	700.00
IUUC-Mcc-055197	Macaca mulatta	86.13	6.00e-145	506.00
IUUC-Meu-056151	Macropus eugenii	74.91	1.00e-116	412.00
IUUC-Mtr-057940	Medicago truncatula	31.48	2.00e-33	137.00
IUUC-Mga-059923	Meleagris gallopavo	51.24	1.00e-126	446.00
IUUC-Mmr-061465	Microcebus murinus	66.74	9.00e-155	539.00
IUUC-Mdo-063063	Monodelphis domestica	64.90	2.00e-155	542.00
IUUC-Mmu-064294	Mus musculus	77.12	0.00e+00	657.00
IUUC-Mac-065598	Musa acuminata	31.71	6.00e-33	135.00
IUUC-Mpu-066831	Mustela putorius furo	86.82	0.00e+00	739.00
IUUC-Nle-069581	Nomascus leucogenys	83.92	0.00e+00	741.00
IUUC-Opr-070644	Ochotona princeps	79.91	0.00e+00	684.00
IUUC-Ont-072605	Oreochromis niloticus	50.74	1.00e-112	400.00
IUUC-Oan-072973	Ornithorhynchus anatinus	71.60	2.00e-145	508.00
IUUC-Ocu-074615	Oryctolagus cuniculus	81.03	0.00e+00	722.00
IUUC-Oba-075283	Oryza barthii	29.85	2.00e-29	123.00
IUUC-Obr-076605	Oryza brachyantha	31.50	2.00e-31	130.00
IUUC-Ogl-077512	Oryza glaberrima	29.85	2.00e-29	124.00
IUUC-Ogu-078329	Oryza glumaepatula	29.85	2.00e-29	123.00
IUUC-Oin-079980	Oryza indica	29.85	3.00e-29	123.00
IUUC-Olo-080516	Oryza longistaminata	29.85	8.00e-30	124.00
IUUC-Ome-081415	Oryza meridionalis	29.85	3.00e-29	123.00
IUUC-Oni-082985	Oryza nivara	29.85	3.00e-29	123.00
IUUC-Opu-084159	Oryza punctata	31.08	2.00e-30	127.00
IUUC-Oru-085137	Oryza rufipogon	29.85	1.00e-29	124.00
IUUC-Osa-085614	Oryza sativa	29.85	1.00e-29	124.00
IUUC-Ola-087044	Oryzias latipes	47.25	3.00e-104	372.00
IUUC-Oga-088274	Otolemur garnettii	81.03	0.00e+00	704.00
IUUC-Oar-089826	Ovis aries	86.89	0.00e+00	772.00
IUUC-Ptr-091631	Pan troglodytes	83.22	0.00e+00	735.00
IUUC-Pan-092535	Papio anubis	82.98	0.00e+00	738.00
IUUC-Psi-093815	Pelodiscus sinensis	55.13	5.00e-121	427.00
IUUC-Pma-094474	Petromyzon marinus	47.06	3.00e-94	338.00
IUUC-Ppa-095414	Physcomitrella patens	28.23	1.00e-27	118.00
IUUC-Pfo-096559	Poecilia formosa	49.18	1.00e-100	359.00
IUUC-Pab-098528	Pongo abelii	83.45	0.00e+00	737.00
IUUC-Pop-100064	Populus trichocarpa	29.23	4.00e-32	132.00
IUUC-Pca-100803	Procavia capensis	80.09	0.00e+00	690.00
IUUC-Ppe-101966	Prunus persica	30.25	5.00e-34	139.00
IUUC-Pva-103213	Pteropus vampyrus	87.82	0.00e+00	737.00
IUUC-Ptt-103899	Puccinia triticina	22.86	4.00e-10	59.70
IUUC-Rno-105087	Rattus norvegicus	77.28	0.00e+00	675.00
IUUC-Sha-107466	Sarcophilus harrisii	70.51	4.00e-150	524.00
IUUC-Smo-109285	Selaginella moellendorffii	27.13	4.00e-25	109.00
IUUC-Sit-109968	Setaria italica	29.54	3.00e-28	119.00
IUUC-Sly-111495	Solanum lycopersicum	29.91	5.00e-32	132.00
IUUC-Stu-112182	Solanum tuberosum	25.00	5.00e-11	63.20
IUUC-Sar-113272	Sorex araneus	79.40	2.00e-164	571.00
IUUC-Sbi-114706	Sorghum bicolor	27.73	3.00e-25	110.00
IUUC-Ssc-115437	Sus scrofa	85.25	0.00e+00	749.00
IUUC-Tgu-116602	Taeniopygia guttata	52.24	4.00e-121	427.00
IUUC-Tru-118698	Takifugu rubripes	49.58	4.00e-96	345.00
IUUC-Tsy-119027	Tarsius syrichta	80.79	0.00e+00	654.00
IUUC-Tni-119787	Tetraodon nigroviridis	49.86	4.00e-101	361.00
IUUC-Tca-121447	Theobroma cacao	29.55	2.00e-33	137.00
IUUC-Tae-125839	Triticum aestivum	30.46	6.00e-30	125.00
IUUC-Tur-126724	Triticum urartu	30.46	6.00e-30	125.00
IUUC-Tme-126958	Tuber melanosporum	24.35	3.00e-10	59.70
IUUC-Tbe-127680	Tupaia belangeri	64.49	7.00e-139	486.00
IUUC-Ttr-128201	Tursiops truncatus	76.42	0.00e+00	637.00
IUUC-Vpa-130451	Vicugna pacos	69.23	2.00e-104	372.00
IUUC-Vvi-131001	Vitis vinifera	30.46	2.00e-34	140.00
IUUC-Xtr-132266	Xenopus tropicalis	62.08	6.00e-130	457.00
IUUC-Xma-133034	Xiphophorus maculatus	54.34	6.00e-113	400.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence