iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115437

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU469364

Gene Name

DDB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000013243.2	ENSSSCT00000014463.2	ENSSSCP00000014071.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-11	43.6	241	274

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H+ +vt +a+    d++l+++s D t+k+WDlr+
   Q: 241  HKKKVTHVALnpcCDWFLATASVDQTVKIWDLRQ 274
           7888999999975559***************986 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MAPRKRPETQ KTPEVVLRPK SKRNRSPREL EPEAKKLCLK GPGSSRRSDS GCLWAGLASL 60
RVPAPCSSII RALHHYKLGR TSWPSLQQGL QQSFLHTLAS YRIFQKAAPF DRRATSLAWH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTTACACAC TTCCCATCTC TCCGCGCGCG CCCCCGCCTT CCCGGTGAGC CTGTTTGGCG 60
GGAAGTTGGC TTAGTTGGCT TACCTGTGGC TCAGCGGGCT CCCTGGTCCC TCCCTTATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006281--P:DNA repair

KEGG

ssc:100513197

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	30.25	4.00e-29	122.00
IUUC-Aml-002203	Ailuropoda melanoleuca	91.31	0.00e+00	774.00
IUUC-Atr-002957	Amborella trichopoda	30.40	2.00e-32	133.00
IUUC-Apl-003832	Anas platyrhynchos	51.67	2.00e-118	419.00
IUUC-Aca-004358	Anolis carolinensis	52.53	8.00e-122	430.00
IUUC-Aly-006296	Arabidopsis lyrata	32.01	7.00e-33	135.00
IUUC-Ath-007115	Arabidopsis thaliana	31.71	6.00e-34	138.00
IUUC-Ame-010817	Astyanax mexicanus	53.74	7.00e-116	410.00
IUUC-Bta-012914	Bos taurus	90.87	0.00e+00	794.00
IUUC-Bdi-014261	Brachypodium distachyon	30.86	9.00e-30	124.00
IUUC-Bol-015317	Brassica oleracea	31.00	1.00e-32	134.00
IUUC-Bra-016848	Brassica rapa	31.91	5.00e-33	135.00
IUUC-Cja-018967	Callithrix jacchus	86.65	0.00e+00	727.00
IUUC-Cfa-021238	Canis familiaris	91.55	0.00e+00	744.00
IUUC-Cpo-022063	Cavia porcellus	78.77	0.00e+00	682.00
IUUC-Csa-023382	Chlorocebus sabaeus	86.42	0.00e+00	764.00
IUUC-Cho-024805	Choloepus hoffmanni	60.45	1.00e-91	328.00
IUUC-Dre-028732	Danio rerio	48.35	1.00e-104	372.00
IUUC-Dor-030461	Dipodomys ordii	78.82	2.00e-117	415.00
IUUC-Ete-033038	Echinops telfairi	72.60	4.00e-180	623.00
IUUC-Eca-033772	Equus caballus	89.46	0.00e+00	725.00
IUUC-Eeu-034662	Erinaceus europaeus	65.50	2.00e-70	259.00
IUUC-Fca-036095	Felis catus	89.70	0.00e+00	748.00
IUUC-Gmo-039683	Gadus morhua	49.03	1.00e-100	359.00
IUUC-Gga-040530	Gallus gallus	52.01	2.00e-119	422.00
IUUC-Gac-041517	Gasterosteus aculeatus	48.91	1.00e-92	333.00
IUUC-Gma-043378	Glycine max	29.84	2.00e-35	143.00
IUUC-Ggo-045364	Gorilla gorilla	86.89	0.00e+00	763.00
IUUC-Hsa-046354	Homo sapiens	86.65	0.00e+00	762.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	86.87	0.00e+00	748.00
IUUC-Lpe-051256	Leersia perrieri	30.86	3.00e-29	123.00
IUUC-Loc-052398	Lepisosteus oculatus	59.10	6.00e-124	437.00
IUUC-Laf-053562	Loxodonta africana	86.89	0.00e+00	726.00
IUUC-Mcc-055197	Macaca mulatta	89.21	1.00e-146	512.00
IUUC-Mtr-057940	Medicago truncatula	31.40	3.00e-33	135.00
IUUC-Mga-059923	Meleagris gallopavo	51.56	3.00e-126	445.00
IUUC-Mmr-061465	Microcebus murinus	89.93	1.00e-147	515.00
IUUC-Mdo-063063	Monodelphis domestica	66.27	2.00e-151	528.00
IUUC-Mmu-064294	Mus musculus	78.69	0.00e+00	668.00
IUUC-Mac-065598	Musa acuminata	31.40	2.00e-30	126.00
IUUC-Mpu-066831	Mustela putorius furo	90.61	0.00e+00	770.00
IUUC-Mlu-067222	Myotis lucifugus	85.25	0.00e+00	749.00
IUUC-Nle-069581	Nomascus leucogenys	86.65	0.00e+00	764.00
IUUC-Opr-070644	Ochotona princeps	80.61	0.00e+00	687.00
IUUC-Ont-072605	Oreochromis niloticus	51.32	2.00e-112	399.00
IUUC-Oan-072973	Ornithorhynchus anatinus	71.93	2.00e-145	508.00
IUUC-Ocu-074615	Oryctolagus cuniculus	83.84	0.00e+00	736.00
IUUC-Oba-075283	Oryza barthii	29.63	3.00e-28	119.00
IUUC-Obr-076605	Oryza brachyantha	31.08	1.00e-30	127.00
IUUC-Ogl-077512	Oryza glaberrima	29.63	3.00e-28	119.00
IUUC-Ogu-078329	Oryza glumaepatula	29.63	3.00e-28	119.00
IUUC-Oin-079980	Oryza indica	29.63	5.00e-28	119.00
IUUC-Olo-080516	Oryza longistaminata	29.63	1.00e-28	120.00
IUUC-Ome-081415	Oryza meridionalis	29.63	4.00e-28	119.00
IUUC-Oni-082985	Oryza nivara	29.63	5.00e-28	119.00
IUUC-Opu-084159	Oryza punctata	30.86	8.00e-30	124.00
IUUC-Oru-085137	Oryza rufipogon	29.63	2.00e-28	120.00
IUUC-Osa-085614	Oryza sativa	29.63	2.00e-28	120.00
IUUC-Ola-087044	Oryzias latipes	46.58	1.00e-101	363.00
IUUC-Oga-088274	Otolemur garnettii	85.71	0.00e+00	740.00
IUUC-Oar-089826	Ovis aries	91.10	0.00e+00	803.00
IUUC-Ptr-091631	Pan troglodytes	86.65	0.00e+00	762.00
IUUC-Pan-092535	Papio anubis	86.65	0.00e+00	765.00
IUUC-Psi-093815	Pelodiscus sinensis	54.74	2.00e-119	422.00
IUUC-Ppa-095414	Physcomitrella patens	28.70	1.00e-26	114.00
IUUC-Pfo-096559	Poecilia formosa	46.60	8.00e-99	353.00
IUUC-Pab-098528	Pongo abelii	86.65	0.00e+00	763.00
IUUC-Pop-100064	Populus trichocarpa	29.43	3.00e-31	129.00
IUUC-Pca-100803	Procavia capensis	83.37	0.00e+00	707.00
IUUC-Ppe-101966	Prunus persica	30.18	1.00e-32	134.00
IUUC-Pva-103213	Pteropus vampyrus	88.06	0.00e+00	729.00
IUUC-Rno-105087	Rattus norvegicus	79.16	0.00e+00	681.00
IUUC-Sit-109968	Setaria italica	29.32	3.00e-27	116.00
IUUC-Sly-111495	Solanum lycopersicum	30.67	1.00e-30	127.00
IUUC-Sar-113272	Sorex araneus	80.83	1.00e-165	575.00
IUUC-Sbi-114706	Sorghum bicolor	27.19	1.00e-23	104.00
IUUC-Tgu-116602	Taeniopygia guttata	51.66	2.00e-117	415.00
IUUC-Tru-118698	Takifugu rubripes	49.03	2.00e-95	342.00
IUUC-Tsy-119027	Tarsius syrichta	82.11	0.00e+00	664.00
IUUC-Tni-119787	Tetraodon nigroviridis	48.32	8.00e-97	347.00
IUUC-Tca-121447	Theobroma cacao	28.83	2.00e-32	133.00
IUUC-Tae-125839	Triticum aestivum	30.56	2.00e-29	123.00
IUUC-Tur-126724	Triticum urartu	30.56	2.00e-29	123.00
IUUC-Tbe-127680	Tupaia belangeri	81.09	1.00e-127	449.00
IUUC-Ttr-128201	Tursiops truncatus	82.67	0.00e+00	691.00
IUUC-Vpa-130451	Vicugna pacos	75.09	4.00e-113	400.00
IUUC-Vvi-131001	Vitis vinifera	30.40	1.00e-32	134.00
IUUC-Xtr-132266	Xenopus tropicalis	54.35	2.00e-124	438.00
IUUC-Xma-133034	Xiphophorus maculatus	50.86	7.00e-111	393.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence