iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-118221

Ensembl Protein ID

ENSTRUP00000033709.1

UniProt Accession

H2U9U3; H2U9U3_TAKRU

Protein Name

Uncharacterized protein

Gene Name

DCAF4L2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000013242.1	ENSTRUT00000033834.1	ENSTRUP00000033708.1
ENSTRUG00000013242.1	ENSTRUT00000033835.1	ENSTRUP00000033709.1
ENSTRUG00000013242.1	ENSTRUT00000033836.1	ENSTRUP00000033710.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-06	28.7	371	407

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           ++ +t+++  +d ++l+++   g+ik+WD+r  ++++
   Q: 371  ESAITSVRVlQDeNYLLAADMLGQIKLWDVRVTKPVQ 407
           5679****88778*****9999*******99777665 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MKKWNWREGL RPHRRPGAGQ YRGWRRGQRS SQEDQRASRG RHENQSVAAS SSTSSSSRSS 60
DLPTPELPGF YFDPEKNRYF RLLPGHNNCN PLTKEKLQEK EREKERQRML AEDENPRKKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGAAAT GGAATTGGCG AGAAGGGCTG CGGCCACACC GACGACCAGG TGCAGGTCAA 60
TATCGAGGCT GGCGCAGAGG TCAAAGGTCG TCTCAGGAAG ATCAGCGGTT TGTCTAATAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0071011--C:precatalytic spliceosome
GO:0005682--C:U5 snRNP
GO:0008380--P:RNA splicing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001176	Aegilops tauschii	35.62	3.00e-14	71.60
IUUC-Aml-001929	Ailuropoda melanoleuca	59.54	2.00e-150	525.00
IUUC-Atr-002556	Amborella trichopoda	30.41	2.00e-14	73.90
IUUC-Apl-003177	Anas platyrhynchos	66.74	2.00e-168	585.00
IUUC-Aca-004610	Anolis carolinensis	63.11	6.00e-174	603.00
IUUC-Aly-005883	Arabidopsis lyrata	26.67	1.00e-20	94.40
IUUC-Ath-006668	Arabidopsis thaliana	31.64	4.00e-16	79.30
IUUC-Ame-010690	Astyanax mexicanus	78.72	0.00e+00	675.00
IUUC-Bta-012668	Bos taurus	58.62	7.00e-138	483.00
IUUC-Bdi-014848	Brachypodium distachyon	37.66	6.00e-19	88.60
IUUC-Bol-016035	Brassica oleracea	33.16	1.00e-17	84.30
IUUC-Bra-016687	Brassica rapa	32.00	9.00e-17	81.60
IUUC-Cja-019560	Callithrix jacchus	60.49	3.00e-56	210.00
IUUC-Cfa-020441	Canis familiaris	60.37	5.00e-152	530.00
IUUC-Cpo-021299	Cavia porcellus	59.13	1.00e-153	536.00
IUUC-Csa-023185	Chlorocebus sabaeus	61.61	7.00e-159	553.00
IUUC-Cho-024353	Choloepus hoffmanni	59.73	2.00e-156	545.00
IUUC-Dno-029890	Dasypus novemcinctus	60.55	2.00e-153	535.00
IUUC-Dor-030618	Dipodomys ordii	56.04	2.00e-51	196.00
IUUC-Ete-032557	Echinops telfairi	52.04	7.00e-88	317.00
IUUC-Eca-033466	Equus caballus	55.24	6.00e-157	546.00
IUUC-Eeu-034995	Erinaceus europaeus	51.43	2.00e-93	335.00
IUUC-Fca-036199	Felis catus	59.95	9.00e-150	523.00
IUUC-Fal-036717	Ficedula albicollis	66.82	7.00e-168	583.00
IUUC-Gmo-039201	Gadus morhua	80.36	0.00e+00	708.00
IUUC-Gga-040398	Gallus gallus	66.90	8.00e-158	550.00
IUUC-Gac-042391	Gasterosteus aculeatus	82.18	0.00e+00	852.00
IUUC-Gma-042906	Glycine max	30.06	8.00e-13	68.60
IUUC-Ggo-045348	Gorilla gorilla	61.84	6.00e-159	553.00
IUUC-Hsa-046746	Homo sapiens	61.84	7.00e-159	553.00
IUUC-Hvu-047825	Hordeum vulgare	35.62	2.00e-17	83.20
IUUC-Itr-048472	Ictidomys tridecemlineatus	60.46	3.00e-153	535.00
IUUC-Lch-050272	Latimeria chalumnae	58.38	5.00e-157	547.00
IUUC-Lpe-051618	Leersia perrieri	33.14	2.00e-19	90.50
IUUC-Loc-051772	Lepisosteus oculatus	77.60	0.00e+00	707.00
IUUC-Laf-054577	Loxodonta africana	53.23	1.00e-124	439.00
IUUC-Mcc-055284	Macaca mulatta	55.50	2.00e-132	465.00
IUUC-Meu-056721	Macropus eugenii	58.21	2.00e-79	289.00
IUUC-Mtr-058472	Medicago truncatula	29.79	4.00e-15	75.90
IUUC-Mga-059238	Meleagris gallopavo	66.36	6.00e-158	550.00
IUUC-Mmr-061642	Microcebus murinus	59.04	4.00e-130	457.00
IUUC-Mdo-062030	Monodelphis domestica	66.67	1.00e-165	575.00
IUUC-Mmu-063420	Mus musculus	58.43	5.00e-156	544.00
IUUC-Mac-065231	Musa acuminata	40.88	7.00e-21	95.50
IUUC-Mpu-065692	Mustela putorius furo	59.91	5.00e-151	527.00
IUUC-Mlu-067428	Myotis lucifugus	59.31	6.00e-154	537.00
IUUC-Nle-070145	Nomascus leucogenys	61.15	6.00e-157	547.00
IUUC-Opr-071081	Ochotona princeps	60.83	1.00e-142	499.00
IUUC-Ont-071302	Oreochromis niloticus	84.71	0.00e+00	825.00
IUUC-Oan-073494	Ornithorhynchus anatinus	57.60	9.00e-118	417.00
IUUC-Ocu-073925	Oryctolagus cuniculus	60.69	2.00e-152	531.00
IUUC-Oba-075797	Oryza barthii	33.33	3.00e-17	83.20
IUUC-Obr-076014	Oryza brachyantha	33.96	1.00e-18	87.80
IUUC-Ogl-077201	Oryza glaberrima	33.33	3.00e-17	82.80
IUUC-Ogu-078056	Oryza glumaepatula	33.33	3.00e-17	83.20
IUUC-Oin-080062	Oryza indica	33.33	3.00e-17	83.20
IUUC-Olo-080869	Oryza longistaminata	32.53	2.00e-17	85.10
IUUC-Ome-081820	Oryza meridionalis	33.33	1.00e-17	84.30
IUUC-Oni-082497	Oryza nivara	33.33	3.00e-17	83.20
IUUC-Opu-083780	Oryza punctata	31.25	1.00e-14	75.90
IUUC-Oru-085091	Oryza rufipogon	33.33	3.00e-17	83.20
IUUC-Osa-085725	Oryza sativa	33.33	3.00e-17	83.20
IUUC-Ola-087033	Oryzias latipes	87.10	0.00e+00	702.00
IUUC-Oga-088861	Otolemur garnettii	59.54	1.00e-148	520.00
IUUC-Oar-090048	Ovis aries	58.62	5.00e-147	514.00
IUUC-Ptr-091658	Pan troglodytes	61.61	4.00e-158	551.00
IUUC-Pan-092873	Papio anubis	61.61	2.00e-158	552.00
IUUC-Psi-093421	Pelodiscus sinensis	69.07	3.00e-176	611.00
IUUC-Pma-094216	Petromyzon marinus	42.17	8.00e-88	317.00
IUUC-Ppa-095186	Physcomitrella patens	43.42	8.00e-09	55.50
IUUC-Pfo-096178	Poecilia formosa	79.77	0.00e+00	739.00
IUUC-Pab-098037	Pongo abelii	54.94	2.00e-116	411.00
IUUC-Pop-099334	Populus trichocarpa	34.78	3.00e-16	78.60
IUUC-Pca-100845	Procavia capensis	54.38	3.00e-139	488.00
IUUC-Pva-103203	Pteropus vampyrus	55.31	7.00e-155	540.00
IUUC-Rno-105675	Rattus norvegicus	59.01	1.00e-146	513.00
IUUC-Sha-107389	Sarcophilus harrisii	66.59	2.00e-168	585.00
IUUC-Sja-107847	Schizosaccharomyces japonicus	22.20	2.00e-11	63.20
IUUC-Sit-110421	Setaria italica	34.62	1.00e-18	87.00
IUUC-Sly-110888	Solanum lycopersicum	27.21	7.00e-15	75.10
IUUC-Sar-113185	Sorex araneus	46.99	1.00e-107	383.00
IUUC-Sbi-114182	Sorghum bicolor	47.37	6.00e-16	77.00
IUUC-Ssc-116005	Sus scrofa	59.31	2.00e-154	538.00
IUUC-Tgu-117023	Taeniopygia guttata	64.52	9.00e-163	566.00
IUUC-Tsy-118784	Tarsius syrichta	54.18	7.00e-124	437.00
IUUC-Tni-120072	Tetraodon nigroviridis	88.82	0.00e+00	878.00
IUUC-Tca-121267	Theobroma cacao	25.16	5.00e-17	82.40
IUUC-Tae-124900	Triticum aestivum	36.25	2.00e-17	82.40
IUUC-Tur-126655	Triticum urartu	36.25	3.00e-17	82.40
IUUC-Tbe-127243	Tupaia belangeri	53.81	2.00e-127	449.00
IUUC-Ttr-129237	Tursiops truncatus	58.24	4.00e-129	454.00
IUUC-Vvi-131184	Vitis vinifera	25.15	5.00e-08	52.80
IUUC-Xtr-132006	Xenopus tropicalis	51.94	2.00e-124	439.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence