iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cgl-026443

Ensembl Protein ID

ELA34040

UniProt Accession

L2G6N9; L2G6N9_COLGN

Genbank Protein ID

ELA34040.1

Protein Name

RNA polymerase ii elongator

Genbank Nucleotide ID

KB020632

Gene Name

CGGC5_6014

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CGGC5_6014	ELA34040	ELA34040

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-39	130.1	211	254
UBD/Beta-Prp	5.40e-45	153.5	29	454

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf......sd.tl.lvsGsdDgtikvWDlrtgvll 36
           gH++++++l+f      ++ ++ l+s+s D+ +++W+l++g+ l
   Q: 211  GHEGWMRSLDFtwetsePNsDIlLASASQDKYVRLWRLHQGKEL 254
           8********999999884445557****************9876 PP

UBD/Beta-Prp

   S: 24   llatgsrdgtikvwdvttgkl..lrsl.sgheaevtavkfspdgk.....ilvtgseDrtikvwdls....tgkcvhtlkghedsvlslsfsp.....sgd 107
           lla g +d+ i +w  +++++  + +l sgh++ v+avkf p+++     ++++gs+D+t+k+w l+    +g+c++t+++h++ v ++++ +     ++ 
   Q: 29   LLAFG-ADSNIALWAPSSENAegITTLlSGHKEVVKAVKFLPQAQgedrrLIISGSDDQTLKIWALDpknnQGECIQTIQEHTAPVNCIAILKsrstpKKV 128
           45555.5*************99988888**************99999999**************55555789*****************999987654556 PP
   S: 108  klvsGshdrtirvwdletgqclee.......................................................tlsghdgvvncvvv.....hpd 148
           +l+sG +d ti++w   +gq                                                           tlsgh+g+ +++ +      p+
   Q: 129  FLASGAADATIKIWAFTSGQLQLRqtiksapryfplclaltaldeaedvfvlaaagtktfiqifvatggedtinfqlqaTLSGHEGWMRSLDFtwetsEPN 229
           789*****************998899999*************99999999999999999999999999999999999999999999999997633333567 PP
   S: 149  g.nllvsGslDrtvrlWdl.......................................ktgkllrtl........tgghtdsvysls.fdsng.kelvsgs 199
           +  ll+s+s D+ vrlW+l                                               +         g h+d +ys   f++++  +l+s+s
   Q: 230  SdILLASASQDKYVRLWRLhqgkelpslavegsdpssgaylpgrspsnkahrlqsggkD-------FsitfeallLG-HEDWIYSARwFTRDSkLQLLSVS 322
           76899999999999999998888888888888888888888888877777766654432.......13333555465.99999999987777757899999 PP
   S: 200  ldgtvklwdlq.............tgec...................................................vrtlnghtdnvksvrfspnder 236
            d+++ +w+               +  +                                                    ++ +ght+n++ ++ s+++++
   Q: 323  ADNSLAMWEADatsgiwvsmvrlgE--IsrekgattatgsiggfwtglwgpdgksvvclgrtgswrrwvyceerdewqpAVAITGHTKNITGIAWSRDGDY 421
           9999999999977666665555550..15555566667777999999999999999999999999999999999999999999999999999999999999 PP
   S: 237  lvsgssDgsiri...W..dlrsgdllktlqlhn 264
           l+s+ssD++ r+   W  d   g  ++ +++++
   Q: 422  LMSTSSDQTTRLharWkrDAAAGRSWHEMSRPQ 454
           999999999999444488888888888777766 PP

Organism

Colletotrichum gloeosporioides

Protein Sequence
(Fasta)

MATIQPSIEY LSTGANGQTA AADWSPCGLL AFGADSNIAL WAPSSENAEG ITTLLSGHKE 60
VVKAVKFLPQ AQGEDRRLII SGSDDQTLKI WALDPKNNQG ECIQTIQEHT APVNCIAILK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTACTA TTCAACCATC CATCGAGTAC CTGTCTACGG GAGCGAATGG ACAGACTGCT 60
GCCGCTGACT GGAGTCCATG CGGCCTGCTC GCCTTCGGTG CTGACTCCAA TATAGCCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0033588--C:Elongator holoenzyme complex
GO:0005634--C:nucleus
GO:0032447--P:protein urmylation
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0002098--P:tRNA wobble uridine modification

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000056	Aegilops tauschii	31.06	4.00e-88	317.00
IUUC-Aml-002049	Ailuropoda melanoleuca	28.92	2.00e-79	288.00
IUUC-Atr-002456	Amborella trichopoda	31.25	1.00e-97	349.00
IUUC-Apl-004053	Anas platyrhynchos	31.46	2.00e-98	351.00
IUUC-Aca-004535	Anolis carolinensis	28.93	2.00e-89	322.00
IUUC-Aly-005746	Arabidopsis lyrata	30.78	3.00e-92	331.00
IUUC-Ath-006664	Arabidopsis thaliana	31.03	3.00e-91	328.00
IUUC-Ago-007971	Ashbya gossypii	37.98	4.00e-133	466.00
IUUC-Acl-008173	Aspergillus clavatus	48.24	0.00e+00	662.00
IUUC-Afl-008665	Aspergillus flavus	43.48	4.00e-95	340.00
IUUC-Afu-008976	Aspergillus fumigatus	48.34	0.00e+00	660.00
IUUC-Ani-009284	Aspergillus nidulans	47.71	0.00e+00	636.00
IUUC-Ang-009809	Aspergillus niger	48.06	0.00e+00	661.00
IUUC-Aor-009959	Aspergillus oryzae	46.61	0.00e+00	649.00
IUUC-Ate-010442	Aspergillus terreus	48.07	0.00e+00	678.00
IUUC-Ame-011409	Astyanax mexicanus	30.84	6.00e-95	340.00
IUUC-Bgr-012137	Blumeria graminis	49.22	0.00e+00	703.00
IUUC-Bta-012892	Bos taurus	30.69	2.00e-102	364.00
IUUC-Bci-013944	Botrytis cinerea	56.15	0.00e+00	740.00
IUUC-Bdi-014512	Brachypodium distachyon	30.89	1.00e-91	328.00
IUUC-Bol-015741	Brassica oleracea	31.39	4.00e-99	354.00
IUUC-Bra-017367	Brassica rapa	32.10	7.00e-101	360.00
IUUC-Cel-018712	Caenorhabditis elegans	27.08	1.00e-61	229.00
IUUC-Cja-018865	Callithrix jacchus	28.77	8.00e-94	336.00
IUUC-Cfa-021006	Canis familiaris	31.46	1.00e-101	363.00
IUUC-Cpo-021370	Cavia porcellus	30.74	1.00e-94	339.00
IUUC-Csa-023845	Chlorocebus sabaeus	30.57	2.00e-100	358.00
IUUC-Cho-024640	Choloepus hoffmanni	30.37	2.00e-56	212.00
IUUC-Cin-025772	Ciona intestinalis	30.23	7.00e-95	340.00
IUUC-Csv-025891	Ciona savignyi	30.10	1.00e-92	332.00
IUUC-Cne-027081	Cryptococcus neoformans	35.32	9.00e-101	359.00
IUUC-Cme-027225	Cyanidioschyzon merolae	27.12	6.00e-34	137.00
IUUC-Dre-028250	Danio rerio	29.99	1.00e-94	338.00
IUUC-Dno-028847	Dasypus novemcinctus	31.13	1.00e-101	362.00
IUUC-Dor-030351	Dipodomys ordii	29.92	7.00e-95	340.00
IUUC-Dse-031317	Dothistroma septosporum	50.14	0.00e+00	638.00
IUUC-Dme-032019	Drosophila melanogaster	35.13	1.00e-108	385.00
IUUC-Ete-033194	Echinops telfairi	28.12	5.00e-49	187.00
IUUC-Eca-033779	Equus caballus	31.24	1.00e-100	358.00
IUUC-Eeu-034790	Erinaceus europaeus	29.54	6.00e-52	197.00
IUUC-Fca-036090	Felis catus	32.15	4.00e-104	370.00
IUUC-Fal-037663	Ficedula albicollis	31.37	7.00e-96	343.00
IUUC-Fox-037828	Fusarium oxysporum	63.73	0.00e+00	943.00
IUUC-Fso-038462	Fusarium solani	62.69	0.00e+00	972.00
IUUC-Gmo-039450	Gadus morhua	30.20	3.00e-99	354.00
IUUC-Ggr-040023	Gaeumannomyces graminis	51.53	0.00e+00	763.00
IUUC-Gga-040480	Gallus gallus	30.90	2.00e-102	365.00
IUUC-Gac-041544	Gasterosteus aculeatus	29.31	4.00e-90	324.00
IUUC-Gma-044048	Glycine max	32.34	1.00e-100	359.00
IUUC-Ggo-045381	Gorilla gorilla	29.52	1.00e-92	332.00
IUUC-Hsa-046096	Homo sapiens	28.81	3.00e-92	331.00
IUUC-Hvu-047494	Hordeum vulgare	31.01	6.00e-96	343.00
IUUC-Itr-048823	Ictidomys tridecemlineatus	28.54	6.00e-75	273.00
IUUC-Kpa-049241	Komagataella pastoris	35.33	5.00e-117	413.00
IUUC-Lch-050512	Latimeria chalumnae	29.41	4.00e-94	337.00
IUUC-Lpe-051448	Leersia perrieri	31.65	2.00e-92	332.00
IUUC-Loc-051882	Lepisosteus oculatus	31.93	2.00e-100	358.00
IUUC-Lma-053023	Leptosphaeria maculans	51.35	0.00e+00	720.00
IUUC-Laf-054519	Loxodonta africana	31.57	1.00e-101	362.00
IUUC-Mcc-055580	Macaca mulatta	28.59	6.00e-92	330.00
IUUC-Meu-056606	Macropus eugenii	38.86	1.00e-31	130.00
IUUC-Mor-057109	Magnaporthe oryzae	55.62	0.00e+00	828.00
IUUC-Mpo-057297	Magnaporthe poae	51.26	0.00e+00	782.00
IUUC-Mtr-058348	Medicago truncatula	31.95	1.00e-98	352.00
IUUC-Mla-059159	Melampsora laricipopulina	30.09	2.00e-84	305.00
IUUC-Mga-059778	Meleagris gallopavo	27.94	5.00e-59	220.00
IUUC-Mvi-060447	Microbotryum violaceum	31.31	1.00e-90	325.00
IUUC-Mmr-061139	Microcebus murinus	29.40	2.00e-92	332.00
IUUC-Mdo-061866	Monodelphis domestica	30.30	2.00e-102	365.00
IUUC-Mmu-063390	Mus musculus	31.56	3.00e-99	354.00
IUUC-Mac-064693	Musa acuminata	31.75	2.00e-103	368.00
IUUC-Mpu-066547	Mustela putorius furo	30.87	1.00e-96	346.00
IUUC-Mlu-067156	Myotis lucifugus	30.91	2.00e-97	348.00
IUUC-Nfi-068616	Neosartorya fischeri	48.14	0.00e+00	663.00
IUUC-Ncr-068915	Neurospora crassa	52.26	0.00e+00	782.00
IUUC-Nle-069958	Nomascus leucogenys	31.14	6.00e-97	347.00
IUUC-Opr-071093	Ochotona princeps	27.68	1.00e-39	156.00
IUUC-Ont-072178	Oreochromis niloticus	29.90	3.00e-95	341.00
IUUC-Oan-073667	Ornithorhynchus anatinus	31.07	1.00e-97	348.00
IUUC-Ocu-074662	Oryctolagus cuniculus	30.19	1.00e-98	352.00
IUUC-Oba-075577	Oryza barthii	32.18	6.00e-97	347.00
IUUC-Obr-076566	Oryza brachyantha	32.13	3.00e-96	344.00
IUUC-Ogl-077054	Oryza glaberrima	32.18	6.00e-97	347.00
IUUC-Ogu-078846	Oryza glumaepatula	31.89	1.00e-96	346.00
IUUC-Oin-079084	Oryza indica	31.68	1.00e-95	342.00
IUUC-Olo-080933	Oryza longistaminata	30.89	1.00e-78	286.00
IUUC-Ome-081500	Oryza meridionalis	30.98	9.00e-84	303.00
IUUC-Oni-082352	Oryza nivara	32.14	1.00e-96	346.00
IUUC-Opu-084116	Oryza punctata	31.39	1.00e-95	342.00
IUUC-Oru-085249	Oryza rufipogon	31.68	1.00e-95	342.00
IUUC-Osa-086270	Oryza sativa	31.68	1.00e-95	342.00
IUUC-Ola-086625	Oryzias latipes	27.66	6.00e-77	280.00
IUUC-Olu-087638	Ostreococcus lucimarinus	30.19	2.00e-64	238.00
IUUC-Oga-088634	Otolemur garnettii	28.57	7.00e-85	306.00
IUUC-Oar-089475	Ovis aries	31.59	3.00e-100	357.00
IUUC-Ptr-091131	Pan troglodytes	30.78	5.00e-100	357.00
IUUC-Pan-092869	Papio anubis	30.41	6.00e-100	357.00
IUUC-Psi-093146	Pelodiscus sinensis	33.39	1.00e-92	332.00
IUUC-Pma-094479	Petromyzon marinus	30.89	3.00e-83	301.00
IUUC-Pno-095061	Phaeosphaeria nodorum	52.57	2.00e-159	554.00
IUUC-Ppa-095618	Physcomitrella patens	31.07	2.00e-95	342.00
IUUC-Pfo-096816	Poecilia formosa	30.96	1.00e-95	342.00
IUUC-Pab-097548	Pongo abelii	30.53	3.00e-99	354.00
IUUC-Pop-099643	Populus trichocarpa	31.70	4.00e-97	347.00
IUUC-Pca-100983	Procavia capensis	28.04	6.00e-45	174.00
IUUC-Ppe-101301	Prunus persica	32.36	3.00e-102	364.00
IUUC-Pva-102460	Pteropus vampyrus	30.60	1.00e-97	349.00
IUUC-Pgr-103507	Puccinia graminis	31.69	1.00e-86	312.00
IUUC-Ptt-103892	Puccinia triticina	29.30	5.00e-70	257.00
IUUC-Pte-104283	Pyrenophora teres	50.63	0.00e+00	728.00
IUUC-Pyt-104465	Pyrenophora triticirepentis	52.01	0.00e+00	674.00
IUUC-Rno-105842	Rattus norvegicus	32.02	5.00e-100	357.00
IUUC-Sce-106459	Saccharomyces cerevisiae	39.31	5.00e-136	476.00
IUUC-Sha-106586	Sarcophilus harrisii	24.62	9.00e-62	230.00
IUUC-Sja-107868	Schizosaccharomyces japonicus	37.90	2.00e-113	401.00
IUUC-Spo-108302	Schizosaccharomyces pombe	36.86	1.00e-116	412.00
IUUC-Smo-108919	Selaginella moellendorffii	30.07	9.00e-93	333.00
IUUC-Sit-109915	Setaria italica	29.98	2.00e-94	338.00
IUUC-Sly-111714	Solanum lycopersicum	30.90	5.00e-96	343.00
IUUC-Stu-112631	Solanum tuberosum	30.39	6.00e-95	340.00
IUUC-Sar-113200	Sorex araneus	27.32	4.00e-75	274.00
IUUC-Sbi-114582	Sorghum bicolor	30.23	2.00e-92	332.00
IUUC-Sre-115001	Sporisorium reilianum	26.55	3.00e-44	172.00
IUUC-Ssc-115519	Sus scrofa	31.16	2.00e-100	358.00
IUUC-Tgu-116987	Taeniopygia guttata	30.47	6.00e-93	333.00
IUUC-Tru-118476	Takifugu rubripes	29.98	7.00e-91	326.00
IUUC-Tsy-119230	Tarsius syrichta	30.11	6.00e-44	171.00
IUUC-Tni-120448	Tetraodon nigroviridis	27.48	3.00e-30	125.00
IUUC-Tca-121650	Theobroma cacao	31.62	5.00e-99	353.00
IUUC-Tre-122086	Trichoderma reesei	63.67	0.00e+00	948.00
IUUC-Tvi-122397	Trichoderma virens	63.33	0.00e+00	904.00
IUUC-Tae-125778	Triticum aestivum	31.22	6.00e-95	340.00
IUUC-Tur-126578	Triticum urartu	30.84	1.00e-94	339.00
IUUC-Tme-126927	Tuber melanosporum	45.67	2.00e-157	548.00
IUUC-Tbe-127922	Tupaia belangeri	34.86	8.00e-35	140.00
IUUC-Ttr-128918	Tursiops truncatus	30.82	2.00e-100	358.00
IUUC-Uma-129474	Ustilago maydis	36.55	2.00e-37	149.00
IUUC-Vda-129944	Verticillium dahliae	63.10	0.00e+00	935.00
IUUC-Vpa-130693	Vicugna pacos	31.35	8.00e-96	343.00
IUUC-Vvi-130949	Vitis vinifera	31.78	6.00e-102	363.00
IUUC-Xtr-132639	Xenopus tropicalis	29.45	4.00e-89	320.00
IUUC-Xma-134223	Xiphophorus maculatus	33.63	1.00e-64	239.00
IUUC-Yli-134601	Yarrowia lipolytica	39.95	2.00e-140	491.00
IUUC-Zma-135952	Zea mays	30.10	5.00e-93	333.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence