iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121685

Ensembl Protein ID

EOY26551

UniProt Accession

A0A061G9I9; A0A061G9I9_THECC

Genbank Protein ID

EOY26550.1; EOY26551.1

Protein Name

JHL25H03.15 protein isoform 1

Genbank Nucleotide ID

CM001884; CM001884

Gene Name

TCM_028352

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_028352	EOY26552	EOY26552
TCM_028352	EOY26551	EOY26551
TCM_028352	EOY26553	EOY26553

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-31	107.1	502	536
UBD/Beta-Prp	2.70e-96	323.2	337	587

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           gH+++v++l f ++  +l+s+s+D+t+++WD+ +g
   Q: 502  GHEGPVHGLMFsPTnAILASSSWDKTVRLWDVFEG 536
           8**********9665889*************8665 PP

UBD/Beta-Prp

   S: 14   tcvkfspdksllatgsrd.gtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGs 113
           t   f + +++l+ g++  g + vw++++++++ + +gh   v+++ +spd+++l+tg++D+ +kvw +s+g c++t+++h++ v++l+f+++++ l+s+s
   Q: 337  TTAVFNDLGNWLTFGCAElGQLLVWEWRSESYILKQQGHYFDVNTLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHCLLSAS 437
           5556777899999999765899******************************************************************************* PP
   S: 114  hdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrt.vrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtge 213
            d t+r wdl  +  ++++ ++ ++   +++ +++g ++ +G+lD++ + +W++ktg+ll+ l+g h+++v+ l f+++   l+s s d+tv+lwd+ +g+
   Q: 438  LDGTVRAWDLLRYRNFRTFTTPSSRQFVSLAADQSGEVICAGTLDSFeIFVWSMKTGRLLDVLSG-HEGPVHGLMFSPTNAILASSSWDKTVRLWDVFEGK 537
           *****************999999999999****************965****************9.*********************************** PP
   S: 214  cvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlh 263
             ++   h   v+ v   p+++ l++ + Dg+i +Wd   g l+ t++++
   Q: 538  GTVETFPHAHDVLTVTYRPDGKQLACSTLDGQIHFWDPIDGLLMYTIEGR 587
           *9**********************************97777666666665 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MNYRFQNLLG APYRGGNAVI TQNTNLISPV GNRVSVTDLV KSQTVTLPDQ SSSNIRRIAA 60
SPDGVFLLTV DDNNRCLFIN IPRRVVLHRI TFKHPVSAVK FNPNGKYVAV AAGKLLQIWK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATTACC GTTTCCAGAA CCTCCTAGGC GCCCCTTACC GCGGCGGCAA CGCCGTCATA 60
ACACAAAACA CCAACCTAAT CTCTCCCGTA GGCAACCGCG TCTCCGTCAC CGACCTCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027145--PWP2
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0009553--P:embryo sac development
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001932	Ailuropoda melanoleuca	41.63	0.00e+00	717.00
IUUC-Atr-003033	Amborella trichopoda	64.54	0.00e+00	1170.00
IUUC-Apl-003219	Anas platyrhynchos	42.10	0.00e+00	719.00
IUUC-Aca-004950	Anolis carolinensis	42.46	0.00e+00	728.00
IUUC-Aly-006213	Arabidopsis lyrata	73.94	0.00e+00	1346.00
IUUC-Ath-006593	Arabidopsis thaliana	72.41	0.00e+00	1318.00
IUUC-Ago-007916	Ashbya gossypii	40.95	0.00e+00	676.00
IUUC-Acl-008225	Aspergillus clavatus	42.87	0.00e+00	729.00
IUUC-Afl-008390	Aspergillus flavus	43.47	0.00e+00	738.00
IUUC-Afu-009039	Aspergillus fumigatus	44.82	0.00e+00	742.00
IUUC-Ani-009228	Aspergillus nidulans	40.37	0.00e+00	632.00
IUUC-Ang-009663	Aspergillus niger	43.06	0.00e+00	714.00
IUUC-Aor-009923	Aspergillus oryzae	43.47	0.00e+00	738.00
IUUC-Ate-010264	Aspergillus terreus	44.19	0.00e+00	750.00
IUUC-Ame-010790	Astyanax mexicanus	35.29	1.00e-70	259.00
IUUC-Bgr-012066	Blumeria graminis	41.90	0.00e+00	713.00
IUUC-Bta-012399	Bos taurus	41.62	0.00e+00	705.00
IUUC-Bci-013757	Botrytis cinerea	48.53	4.00e-163	567.00
IUUC-Bdi-015028	Brachypodium distachyon	69.93	0.00e+00	1216.00
IUUC-Bol-016521	Brassica oleracea	73.17	0.00e+00	1301.00
IUUC-Bra-017096	Brassica rapa	72.37	0.00e+00	1296.00
IUUC-Cel-018690	Caenorhabditis elegans	32.52	3.00e-142	498.00
IUUC-Cja-019229	Callithrix jacchus	48.75	5.00e-175	607.00
IUUC-Cfa-020504	Canis familiaris	42.49	0.00e+00	717.00
IUUC-Cpo-021574	Cavia porcellus	42.54	0.00e+00	737.00
IUUC-Cre-022756	Chlamydomonas reinhardtii	52.80	0.00e+00	656.00
IUUC-Csa-023436	Chlorocebus sabaeus	43.11	0.00e+00	712.00
IUUC-Cin-025397	Ciona intestinalis	40.57	5.00e-158	550.00
IUUC-Csv-026194	Ciona savignyi	45.54	1.00e-135	476.00
IUUC-Cgl-026684	Colletotrichum gloeosporioides	40.58	0.00e+00	665.00
IUUC-Cne-027031	Cryptococcus neoformans	42.02	0.00e+00	743.00
IUUC-Cme-027276	Cyanidioschyzon merolae	31.03	2.00e-103	369.00
IUUC-Dre-027514	Danio rerio	41.54	0.00e+00	699.00
IUUC-Dno-029191	Dasypus novemcinctus	43.89	0.00e+00	657.00
IUUC-Dor-030149	Dipodomys ordii	41.54	0.00e+00	713.00
IUUC-Dse-031260	Dothistroma septosporum	45.77	2.00e-145	508.00
IUUC-Dme-032043	Drosophila melanogaster	38.06	4.00e-172	597.00
IUUC-Ete-033102	Echinops telfairi	46.82	1.00e-155	542.00
IUUC-Eca-033223	Equus caballus	42.46	0.00e+00	724.00
IUUC-Fca-035795	Felis catus	40.22	0.00e+00	650.00
IUUC-Fal-036830	Ficedula albicollis	42.83	0.00e+00	721.00
IUUC-Fox-037835	Fusarium oxysporum	46.70	2.00e-157	549.00
IUUC-Fso-038324	Fusarium solani	46.38	4.00e-160	557.00
IUUC-Gmo-039355	Gadus morhua	41.27	0.00e+00	719.00
IUUC-Ggr-039840	Gaeumannomyces graminis	39.89	0.00e+00	648.00
IUUC-Gga-040907	Gallus gallus	48.98	2.00e-157	548.00
IUUC-Gac-042624	Gasterosteus aculeatus	42.14	0.00e+00	709.00
IUUC-Gma-043034	Glycine max	75.17	0.00e+00	1400.00
IUUC-Hsa-046327	Homo sapiens	42.79	0.00e+00	728.00
IUUC-Hvu-047416	Hordeum vulgare	70.69	0.00e+00	1231.00
IUUC-Itr-049083	Ictidomys tridecemlineatus	42.89	0.00e+00	736.00
IUUC-Kpa-049150	Komagataella pastoris	39.96	0.00e+00	657.00
IUUC-Lch-049460	Latimeria chalumnae	40.56	2.00e-179	622.00
IUUC-Lpe-050840	Leersia perrieri	70.80	0.00e+00	1238.00
IUUC-Loc-052733	Lepisosteus oculatus	40.94	0.00e+00	719.00
IUUC-Lma-053277	Leptosphaeria maculans	41.18	0.00e+00	676.00
IUUC-Laf-054294	Loxodonta africana	43.11	0.00e+00	708.00
IUUC-Mcc-054624	Macaca mulatta	43.00	0.00e+00	732.00
IUUC-Meu-056665	Macropus eugenii	46.51	2.00e-96	345.00
IUUC-Mor-057288	Magnaporthe oryzae	46.81	1.00e-160	559.00
IUUC-Mpo-057594	Magnaporthe poae	39.96	0.00e+00	650.00
IUUC-Mtr-058700	Medicago truncatula	78.23	0.00e+00	1453.00
IUUC-Mla-058846	Melampsora laricipopulina	43.24	0.00e+00	722.00
IUUC-Mga-059207	Meleagris gallopavo	38.99	0.00e+00	627.00
IUUC-Mvi-060327	Microbotryum violaceum	45.31	0.00e+00	792.00
IUUC-Mmr-061264	Microcebus murinus	42.75	0.00e+00	707.00
IUUC-Mdo-062327	Monodelphis domestica	42.59	0.00e+00	712.00
IUUC-Mmu-063542	Mus musculus	42.09	0.00e+00	704.00
IUUC-Mac-065142	Musa acuminata	72.15	0.00e+00	1303.00
IUUC-Mpu-066098	Mustela putorius furo	43.24	0.00e+00	639.00
IUUC-Mlu-067056	Myotis lucifugus	38.66	1.00e-174	605.00
IUUC-Nfi-068323	Neosartorya fischeri	44.46	0.00e+00	739.00
IUUC-Ncr-068925	Neurospora crassa	40.29	0.00e+00	702.00
IUUC-Nle-068970	Nomascus leucogenys	42.71	0.00e+00	727.00
IUUC-Opr-070966	Ochotona princeps	56.51	2.00e-109	389.00
IUUC-Ont-071252	Oreochromis niloticus	41.91	0.00e+00	718.00
IUUC-Oan-072737	Ornithorhynchus anatinus	40.50	0.00e+00	689.00
IUUC-Oba-075794	Oryza barthii	70.09	0.00e+00	1213.00
IUUC-Obr-076617	Oryza brachyantha	70.76	0.00e+00	1253.00
IUUC-Ogl-077022	Oryza glaberrima	71.69	0.00e+00	1262.00
IUUC-Ogu-078757	Oryza glumaepatula	57.51	0.00e+00	932.00
IUUC-Oin-079813	Oryza indica	71.43	0.00e+00	1253.00
IUUC-Olo-080265	Oryza longistaminata	71.19	0.00e+00	1253.00
IUUC-Ome-081494	Oryza meridionalis	71.35	0.00e+00	1254.00
IUUC-Oni-082639	Oryza nivara	57.62	0.00e+00	933.00
IUUC-Opu-084005	Oryza punctata	71.33	0.00e+00	1267.00
IUUC-Oru-084883	Oryza rufipogon	57.51	0.00e+00	932.00
IUUC-Osa-086158	Oryza sativa	71.24	0.00e+00	1252.00
IUUC-Ola-086822	Oryzias latipes	41.58	0.00e+00	713.00
IUUC-Oga-088887	Otolemur garnettii	42.68	0.00e+00	711.00
IUUC-Oar-090110	Ovis aries	40.94	0.00e+00	672.00
IUUC-Pan-092808	Papio anubis	42.86	0.00e+00	739.00
IUUC-Psi-093954	Pelodiscus sinensis	42.51	0.00e+00	731.00
IUUC-Pno-094922	Phaeosphaeria nodorum	42.33	0.00e+00	706.00
IUUC-Ppa-095678	Physcomitrella patens	57.37	0.00e+00	968.00
IUUC-Pfo-097175	Poecilia formosa	42.36	0.00e+00	735.00
IUUC-Pab-098155	Pongo abelii	42.68	0.00e+00	725.00
IUUC-Pop-099635	Populus trichocarpa	81.61	0.00e+00	1461.00
IUUC-Pca-100947	Procavia capensis	40.20	0.00e+00	679.00
IUUC-Ppe-101552	Prunus persica	80.07	0.00e+00	1493.00
IUUC-Pva-102744	Pteropus vampyrus	39.49	8.00e-179	620.00
IUUC-Pgr-103389	Puccinia graminis	42.54	0.00e+00	700.00
IUUC-Ptt-103953	Puccinia triticina	37.70	2.00e-159	555.00
IUUC-Pte-104079	Pyrenophora teres	41.49	0.00e+00	672.00
IUUC-Pyt-104656	Pyrenophora triticirepentis	41.60	0.00e+00	676.00
IUUC-Rno-105502	Rattus norvegicus	48.25	2.00e-173	602.00
IUUC-Sce-106390	Saccharomyces cerevisiae	41.55	0.00e+00	716.00
IUUC-Sha-107264	Sarcophilus harrisii	42.61	7.00e-92	330.00
IUUC-Sja-107674	Schizosaccharomyces japonicus	42.23	0.00e+00	735.00
IUUC-Spo-108348	Schizosaccharomyces pombe	41.68	0.00e+00	716.00
IUUC-Smo-109327	Selaginella moellendorffii	59.91	0.00e+00	1087.00
IUUC-Sit-110304	Setaria italica	71.01	0.00e+00	1282.00
IUUC-Sly-111620	Solanum lycopersicum	85.20	0.00e+00	1029.00
IUUC-Stu-112877	Solanum tuberosum	77.93	0.00e+00	1465.00
IUUC-Sbi-114702	Sorghum bicolor	71.28	0.00e+00	1269.00
IUUC-Sre-115129	Sporisorium reilianum	43.26	0.00e+00	721.00
IUUC-Ssc-115931	Sus scrofa	44.44	1.00e-98	352.00
IUUC-Tgu-116787	Taeniopygia guttata	42.51	0.00e+00	721.00
IUUC-Tru-118218	Takifugu rubripes	41.84	0.00e+00	714.00
IUUC-Tsy-119401	Tarsius syrichta	46.47	4.00e-124	438.00
IUUC-Tni-120046	Tetraodon nigroviridis	41.93	0.00e+00	684.00
IUUC-Tre-122154	Trichoderma reesei	41.48	0.00e+00	702.00
IUUC-Tvi-122451	Trichoderma virens	45.95	2.00e-163	568.00
IUUC-Tae-125397	Triticum aestivum	78.56	0.00e+00	764.00
IUUC-Tur-126650	Triticum urartu	71.32	0.00e+00	1149.00
IUUC-Tme-127005	Tuber melanosporum	43.75	0.00e+00	726.00
IUUC-Tbe-128102	Tupaia belangeri	43.32	4.00e-129	454.00
IUUC-Ttr-128259	Tursiops truncatus	42.84	0.00e+00	701.00
IUUC-Uma-129511	Ustilago maydis	43.23	0.00e+00	721.00
IUUC-Vda-129833	Verticillium dahliae	38.44	3.00e-174	604.00
IUUC-Vvi-131572	Vitis vinifera	78.69	0.00e+00	1420.00
IUUC-Xtr-131776	Xenopus tropicalis	36.04	3.00e-63	235.00
IUUC-Xma-133887	Xiphophorus maculatus	42.38	0.00e+00	709.00
IUUC-Yli-134427	Yarrowia lipolytica	41.59	0.00e+00	705.00
IUUC-Zma-135980	Zea mays	70.73	0.00e+00	1238.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence