iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000015501.1	ENSONIT00000019524.1	ENSONIP00000019507.1
ENSONIG00000015501.1	ENSONIT00000019525.1	ENSONIP00000019508.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-32	110.2	677	709
UBD/Beta-Prp	1.40e-60	205.4	399	713

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH++ vtc++f +d ++l++ s+D  + vW+l+
   Q: 677  GHSELVTCIRFsQDcRHLITVSGDSCVFVWRLD 709
           8***********888****************86 PP

UBD/Beta-Prp

   S: 24   llatgsrdgtikvwdvttgkllrslsgheae..........................vtavkfspdgkilvtgseDrtikvwdlstgkc 86
            ++t s d+ti++w ++++ +   l++++                            ++ +++spdg  l+ g + ++++v+ l+  + 
   Q: 399  SFLTCSSDNTIRLWHADPPGAHTNLYSNDLLrilyvgentqhlqaegeaaggdgkagIKVLCISPDGRHLAAGDRCGNLRVFGLQFLDE 487
           4678888**************555555554455555555599999999999999999******************************** PP
   S: 87   vhtlkghedsvlslsfsp..sg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg..nllvsGslDrtvrlWdl.... 166
           ++++++h+++vl+l+fsp  +g + l+s+s+dr i+v+dle ++ le+tl+ h+++++ v++ +++    lvs+++D+ +  ++     
   Q: 488  LVKIEAHDSEVLCLEFSPisTGvKLLASASRDRLIHVFDLERNYSLEQTLNDHSASITAVKFTGESpeVRLVSCGADKSIY-FQTaeqt 575
           *******************88899*****************************************99889**********9.6666*** PP
   S: 167  .................................................ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvkl 206
                                                            k +k+l+  ++ ++++  ++++d++g ++++   d+ +++
   Q: 576  seglqfsrshhvvekttlydmdldssrthvavacqdrnscgrisadkakKLKKCLKGSSS-DEGALLKVQMDPSGSFFATSCSDKNITI 663
           **********************************************88888888888887.9999999********************* PP
   S: 207  wdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdl 256
           +d+++gecv tl gh++ v+++rfs++  +l+++s D  +++W l+ + +
   Q: 664  FDYESGECVATLFGHSELVTCIRFSQDCRHLITVSGDSCVFVWRLDAQMT 713
           *******************************************4443332 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MAEGADCGSA NPAKRKQPAG RKSRQSQGKR ISSSRVCLEK VLGISTASSS GLTSDPNTGI 60
IAYPAGCVVV LLHPKKNKQS HIISASRKPF SALAFSHDGK HLVTGESGHM PCVRVWELDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGATTTCAA CGCCTCCGCT GTCCATTGGC TGGTTCTCTG TTTTGTGGGC GGGGCTTGGT 60
TTAAACCGGA GTCCCGCCGC AGACAAAAGT GTCAGGTTTC CTGTAGCCAC AGTTTATACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR030545--WDR62

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Afl-008426	Aspergillus flavus	22.66	3.00e-22	100.00
IUUC-Aor-009966	Aspergillus oryzae	22.66	3.00e-22	100.00
IUUC-Ame-010799	Astyanax mexicanus	60.20	0.00e+00	1083.00
IUUC-Bgr-012083	Blumeria graminis	23.56	2.00e-23	105.00
IUUC-Cgl-026454	Colletotrichum gloeosporioides	21.76	2.00e-19	91.30
IUUC-Dre-028678	Danio rerio	59.76	0.00e+00	1169.00
IUUC-Dse-031501	Dothistroma septosporum	22.90	1.00e-25	112.00
IUUC-Loc-052488	Lepisosteus oculatus	56.77	0.00e+00	1077.00
IUUC-Mor-057027	Magnaporthe oryzae	21.47	4.00e-20	94.00
IUUC-Mtr-058383	Medicago truncatula	31.18	2.00e-51	197.00
IUUC-Ncr-068758	Neurospora crassa	21.53	3.00e-25	111.00
IUUC-Psi-093710	Pelodiscus sinensis	49.62	0.00e+00	930.00
IUUC-Pfo-096069	Poecilia formosa	74.52	0.00e+00	1124.00
IUUC-Pop-099155	Populus trichocarpa	32.43	2.00e-97	351.00
IUUC-Tru-118566	Takifugu rubripes	75.10	0.00e+00	1154.00
IUUC-Tni-120316	Tetraodon nigroviridis	73.77	0.00e+00	1018.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence