iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mdo-061859

Ensembl Protein ID

ENSMODP00000002093.3

UniProt Accession

F6RMK8; F6RMK8_MONDO

Protein Name

Uncharacterized protein

Gene Name

RBBP5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMODG00000001708.3	ENSMODT00000002136.3	ENSMODP00000002093.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.50e-12	45.4	65	102

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H  +v++l++  d + lvs+s D+ +  WD+ +g++ +
   Q: 65   HIHPVCSLCWsRDgHKLVSASTDNIVSQWDVLSGDCDQ 102
           889********88799*******************976 PP

Organism

Monodelphis domestica

Protein Sequence
(Fasta)

MNLELLESFG QNYPEEADGT LDCISMALTC TFNRWGTLLA VGCNDGRIVI WDFLTRGIAK 60
IISAHIHPVC SLCWSRDGHK LVSASTDNIV SQWDVLSGDC DQRFRFPSPI LKVQYHPRDQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCACAATGA TACCTATCCA GAAATGGAAT GTGGGAGGCA ATGAATTTCC CCTTTACTGG 60
AGATCTTTAG GCAAAGACTA AATGAACACT TGTTGGGTAT GTTGTAGAGG GGATTTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0071339--C:MLL1 complex
GO:0044666--C:MLL3/4 complex
GO:0005730--C:nucleolus
GO:0048188--C:Set1C/COMPASS complex
GO:0042800--F:histone methyltransferase activity (H3-K4 specific)
GO:0044212--F:transcription regulatory region DNA binding
GO:0006974--P:cellular response to DNA damage stimulus
GO:0043627--P:response to estrogen

KEGG

mdo:100013956

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000616	Aegilops tauschii	34.40	1.00e-63	237.00
IUUC-Aml-002118	Ailuropoda melanoleuca	96.82	0.00e+00	1003.00
IUUC-Atr-002777	Amborella trichopoda	35.97	4.00e-61	229.00
IUUC-Apl-004056	Anas platyrhynchos	97.20	0.00e+00	1006.00
IUUC-Aca-004999	Anolis carolinensis	96.44	0.00e+00	977.00
IUUC-Aly-006092	Arabidopsis lyrata	35.00	5.00e-56	212.00
IUUC-Ath-006947	Arabidopsis thaliana	34.62	4.00e-57	215.00
IUUC-Ago-007753	Ashbya gossypii	31.47	1.00e-38	154.00
IUUC-Acl-008105	Aspergillus clavatus	31.45	4.00e-47	182.00
IUUC-Afl-008633	Aspergillus flavus	32.95	6.00e-47	181.00
IUUC-Afu-009075	Aspergillus fumigatus	30.84	4.00e-31	129.00
IUUC-Ani-009233	Aspergillus nidulans	34.00	3.00e-57	216.00
IUUC-Ang-009695	Aspergillus niger	33.71	3.00e-47	182.00
IUUC-Aor-009988	Aspergillus oryzae	32.95	6.00e-47	181.00
IUUC-Ate-010313	Aspergillus terreus	31.03	2.00e-46	180.00
IUUC-Ame-011134	Astyanax mexicanus	79.34	0.00e+00	805.00
IUUC-Bgr-012302	Blumeria graminis	32.74	2.00e-47	183.00
IUUC-Bta-012946	Bos taurus	98.51	0.00e+00	1031.00
IUUC-Bci-013968	Botrytis cinerea	33.19	3.00e-55	209.00
IUUC-Bdi-014387	Brachypodium distachyon	36.55	8.00e-71	261.00
IUUC-Bra-017414	Brassica rapa	36.54	2.00e-58	220.00
IUUC-Cel-018610	Caenorhabditis elegans	42.36	3.00e-83	302.00
IUUC-Cja-019938	Callithrix jacchus	98.50	0.00e+00	1016.00
IUUC-Cfa-020726	Canis familiaris	96.30	0.00e+00	1010.00
IUUC-Cpo-021560	Cavia porcellus	99.69	0.00e+00	645.00
IUUC-Cre-022588	Chlamydomonas reinhardtii	50.43	3.00e-29	122.00
IUUC-Csa-024192	Chlorocebus sabaeus	98.51	0.00e+00	1031.00
IUUC-Cho-024355	Choloepus hoffmanni	98.92	0.00e+00	892.00
IUUC-Cin-025285	Ciona intestinalis	67.08	0.00e+00	629.00
IUUC-Csv-026366	Ciona savignyi	67.02	1.00e-173	602.00
IUUC-Cgl-026450	Colletotrichum gloeosporioides	31.22	3.00e-43	169.00
IUUC-Cne-027092	Cryptococcus neoformans	31.54	1.00e-47	184.00
IUUC-Cme-027137	Cyanidioschyzon merolae	32.54	4.00e-26	112.00
IUUC-Dre-027374	Danio rerio	90.41	0.00e+00	859.00
IUUC-Dno-030003	Dasypus novemcinctus	92.34	0.00e+00	930.00
IUUC-Dor-030355	Dipodomys ordii	97.58	0.00e+00	1020.00
IUUC-Dse-031442	Dothistroma septosporum	32.81	9.00e-50	191.00
IUUC-Dme-031932	Drosophila melanogaster	67.34	0.00e+00	684.00
IUUC-Ete-032858	Echinops telfairi	91.70	0.00e+00	776.00
IUUC-Eca-034217	Equus caballus	97.96	0.00e+00	1027.00
IUUC-Eeu-035024	Erinaceus europaeus	95.35	0.00e+00	991.00
IUUC-Fca-035370	Felis catus	97.20	0.00e+00	1005.00
IUUC-Fal-036628	Ficedula albicollis	92.02	0.00e+00	812.00
IUUC-Fox-037739	Fusarium oxysporum	31.73	2.00e-46	179.00
IUUC-Fso-038094	Fusarium solani	31.39	5.00e-44	172.00
IUUC-Gmo-039088	Gadus morhua	89.72	0.00e+00	866.00
IUUC-Ggr-040063	Gaeumannomyces graminis	33.42	2.00e-54	206.00
IUUC-Gga-041160	Gallus gallus	97.40	0.00e+00	1002.00
IUUC-Gac-041333	Gasterosteus aculeatus	91.14	0.00e+00	884.00
IUUC-Gma-043909	Glycine max	36.62	8.00e-65	241.00
IUUC-Ggo-044657	Gorilla gorilla	98.51	0.00e+00	1031.00
IUUC-Hsa-045894	Homo sapiens	98.51	0.00e+00	1031.00
IUUC-Hvu-047662	Hordeum vulgare	33.52	4.00e-64	239.00
IUUC-Itr-048125	Ictidomys tridecemlineatus	98.25	0.00e+00	978.00
IUUC-Kpa-049095	Komagataella pastoris	29.58	4.00e-37	148.00
IUUC-Lch-049495	Latimeria chalumnae	69.33	0.00e+00	630.00
IUUC-Lpe-051038	Leersia perrieri	35.73	1.00e-59	224.00
IUUC-Loc-052680	Lepisosteus oculatus	91.42	0.00e+00	944.00
IUUC-Laf-053717	Loxodonta africana	98.29	0.00e+00	1004.00
IUUC-Mcc-055007	Macaca mulatta	95.43	0.00e+00	965.00
IUUC-Meu-056494	Macropus eugenii	99.28	1.00e-136	479.00
IUUC-Mor-057173	Magnaporthe oryzae	33.70	2.00e-54	206.00
IUUC-Mpo-057622	Magnaporthe poae	32.28	2.00e-54	206.00
IUUC-Mtr-057672	Medicago truncatula	37.82	1.00e-70	260.00
IUUC-Mla-059057	Melampsora laricipopulina	34.70	5.00e-48	185.00
IUUC-Mga-060037	Meleagris gallopavo	96.84	0.00e+00	1005.00
IUUC-Mvi-060321	Microbotryum violaceum	33.75	1.00e-51	197.00
IUUC-Mmr-060755	Microcebus murinus	97.15	0.00e+00	988.00
IUUC-Mmu-063755	Mus musculus	97.58	0.00e+00	1020.00
IUUC-Mac-065292	Musa acuminata	34.93	1.00e-71	265.00
IUUC-Mpu-065896	Mustela putorius furo	98.78	0.00e+00	944.00
IUUC-Mlu-067927	Myotis lucifugus	97.94	0.00e+00	1017.00
IUUC-Nfi-068429	Neosartorya fischeri	29.81	9.00e-49	187.00
IUUC-Ncr-068738	Neurospora crassa	32.32	2.00e-48	186.00
IUUC-Nle-069608	Nomascus leucogenys	98.51	0.00e+00	1031.00
IUUC-Opr-070319	Ochotona princeps	97.74	0.00e+00	1008.00
IUUC-Ont-071451	Oreochromis niloticus	91.98	0.00e+00	906.00
IUUC-Oan-073445	Ornithorhynchus anatinus	98.26	0.00e+00	853.00
IUUC-Ocu-074341	Oryctolagus cuniculus	98.33	0.00e+00	1028.00
IUUC-Oba-075664	Oryza barthii	36.52	2.00e-64	239.00
IUUC-Obr-076630	Oryza brachyantha	35.73	1.00e-60	227.00
IUUC-Ogl-077847	Oryza glaberrima	36.52	2.00e-64	240.00
IUUC-Ogu-077970	Oryza glumaepatula	38.16	2.00e-62	233.00
IUUC-Oin-079374	Oryza indica	36.52	2.00e-64	239.00
IUUC-Olo-080992	Oryza longistaminata	36.52	2.00e-64	239.00
IUUC-Ome-081683	Oryza meridionalis	36.09	9.00e-62	231.00
IUUC-Oni-082594	Oryza nivara	36.52	2.00e-64	239.00
IUUC-Opu-083907	Oryza punctata	37.00	3.00e-65	243.00
IUUC-Oru-084400	Oryza rufipogon	36.52	2.00e-64	239.00
IUUC-Osa-085442	Oryza sativa	36.52	2.00e-64	239.00
IUUC-Ola-086569	Oryzias latipes	91.97	0.00e+00	828.00
IUUC-Oga-088947	Otolemur garnettii	90.81	0.00e+00	922.00
IUUC-Oar-090358	Ovis aries	96.82	0.00e+00	1002.00
IUUC-Ptr-091601	Pan troglodytes	98.49	0.00e+00	1014.00
IUUC-Pan-092466	Papio anubis	98.51	0.00e+00	1031.00
IUUC-Psi-093614	Pelodiscus sinensis	97.57	0.00e+00	1009.00
IUUC-Pma-094450	Petromyzon marinus	88.84	0.00e+00	764.00
IUUC-Pno-094819	Phaeosphaeria nodorum	33.65	6.00e-49	188.00
IUUC-Ppa-095157	Physcomitrella patens	35.21	1.00e-27	116.00
IUUC-Pfo-096312	Poecilia formosa	90.32	0.00e+00	874.00
IUUC-Pab-098058	Pongo abelii	98.51	0.00e+00	1031.00
IUUC-Pop-099039	Populus trichocarpa	37.12	1.00e-62	234.00
IUUC-Pca-100623	Procavia capensis	94.05	0.00e+00	976.00
IUUC-Ppe-102053	Prunus persica	37.61	1.00e-70	260.00
IUUC-Pva-102779	Pteropus vampyrus	94.98	0.00e+00	968.00
IUUC-Pgr-103398	Puccinia graminis	35.40	6.00e-52	198.00
IUUC-Ptt-103912	Puccinia triticina	35.57	2.00e-51	196.00
IUUC-Pte-104246	Pyrenophora teres	33.49	7.00e-50	191.00
IUUC-Pyt-104582	Pyrenophora triticirepentis	33.79	9.00e-50	191.00
IUUC-Rno-104838	Rattus norvegicus	97.77	0.00e+00	1021.00
IUUC-Sce-106229	Saccharomyces cerevisiae	30.71	6.00e-34	138.00
IUUC-Sha-106527	Sarcophilus harrisii	99.81	0.00e+00	1031.00
IUUC-Sja-107862	Schizosaccharomyces japonicus	34.74	1.00e-58	219.00
IUUC-Spo-108025	Schizosaccharomyces pombe	37.34	4.00e-56	211.00
IUUC-Ssl-108544	Sclerotinia sclerotiorum	32.77	4.00e-54	205.00
IUUC-Smo-109474	Selaginella moellendorffii	34.85	9.00e-53	201.00
IUUC-Sit-110687	Setaria italica	36.02	2.00e-57	216.00
IUUC-Sly-111597	Solanum lycopersicum	36.94	2.00e-62	233.00
IUUC-Stu-112389	Solanum tuberosum	36.26	1.00e-61	230.00
IUUC-Sar-113284	Sorex araneus	84.57	0.00e+00	845.00
IUUC-Sbi-114362	Sorghum bicolor	31.52	5.00e-56	212.00
IUUC-Sre-115146	Sporisorium reilianum	29.25	2.00e-36	147.00
IUUC-Ssc-115604	Sus scrofa	97.20	0.00e+00	1004.00
IUUC-Tgu-117010	Taeniopygia guttata	82.56	4.00e-75	273.00
IUUC-Tru-118258	Takifugu rubripes	90.41	0.00e+00	891.00
IUUC-Tsy-119169	Tarsius syrichta	87.11	0.00e+00	640.00
IUUC-Tni-119668	Tetraodon nigroviridis	89.41	0.00e+00	870.00
IUUC-Tca-121010	Theobroma cacao	37.77	2.00e-70	259.00
IUUC-Tre-121944	Trichoderma reesei	32.24	6.00e-46	178.00
IUUC-Tvi-122283	Trichoderma virens	32.58	2.00e-44	173.00
IUUC-Tur-126395	Triticum urartu	34.91	6.00e-65	242.00
IUUC-Tme-127150	Tuber melanosporum	36.93	7.00e-65	241.00
IUUC-Tbe-127745	Tupaia belangeri	80.98	7.00e-141	493.00
IUUC-Ttr-129187	Tursiops truncatus	93.31	0.00e+00	932.00
IUUC-Uma-129654	Ustilago maydis	28.48	4.00e-33	136.00
IUUC-Vda-129788	Verticillium dahliae	26.58	3.00e-46	179.00
IUUC-Vpa-130182	Vicugna pacos	98.26	0.00e+00	748.00
IUUC-Vvi-131557	Vitis vinifera	37.34	2.00e-70	260.00
IUUC-Xtr-132007	Xenopus tropicalis	92.39	0.00e+00	923.00
IUUC-Xma-133909	Xiphophorus maculatus	90.62	0.00e+00	892.00
IUUC-Yli-134524	Yarrowia lipolytica	36.91	4.00e-58	218.00
IUUC-Zma-134821	Zea mays	34.60	4.00e-58	219.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence