iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093527

Ensembl Protein ID

ENSPSIP00000014085.1

UniProt Accession

K7G1C5; K7G1C5_PELSI

Genbank Protein ID

ENSPSIP00000014085

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01087834

Gene Name

CDC40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000012642.1	ENSPSIT00000014150.1	ENSPSIP00000014085.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-30	103.2	329	366
UBD/Beta-Prp	2.60e-41	141.8	278	487

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd..tllvsGsdDgtikvWDlrtgvll 36
           gH+  v++++f++  t ++s+++D  +k+WD+ tg ++
   Q: 329  GHSKAVRDICFNNagTQFLSAAYDRYLKLWDTETGQCV 366
           8**********44479*******************997 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdl.etgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkl 171
           k++h+++gh++ v +++++p sg+ l+s s d  i++w++  ++ cl+ t+ gh+++v+ ++++  g  + s+++Dr ++lWd +tg++
   Q: 278  KQLHVWSGHTKGVSAVRLFPlSGHMLLSCSMDCKIKLWEVyGERRCLR-TFIGHSKAVRDICFNNAGTQFLSAAYDRYLKLWDTETGQC 365
           455556666666666666665556666666666666665523444444.6666666666666666556666666666666666666666 PP
   S: 172  lrtltgghtdsvyslsfdsng...kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdll 257
           + ++t  + +  y+++f+++    + +v+g  d+++  wd+++ge+v+++  h   v+ + f +++ r+vs+s+D+s+r+W  +     
   Q: 366  VSRFT--NRKVPYCVKFNPDEdkqNLFVAGMSDKKIVQWDVRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDF 452
           66664..3445555555555555555566666666666666666666666666666666666666666666666666666544444445 PP
   S: 258  ktlqlhnssvisvavlsfgdnvlvlgsedskvniw 292
           k ++ +  ++++  +ls++++ l+  s d+++ i+
   Q: 453  KYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIF 487
           55555555555555555555555555555555544 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MSAAIAALAS YGGSASGSDS DTEGSSRRPA LVASRDAVLH LASPPPGPQA LAVDAAPEVA 60
VKEDVETGVH LDPAIKEVQY NPTYDTMFAP EFGPENPFRT QQMAAPRNML SGYAEPTHIN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCTGGGATT TGCAGTCCTT CCTGTGAGTC CTGAAAGATT AACCCTATTT CAGCACCTTG 60
GGAAGGGAAC TCTGCTTCCC AAAATCATGT TTCGTAAAAG ACGCAGAAAA TTATAAGTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0003723--F:RNA binding
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	48.67	1.00e-128	452.00
IUUC-Aml-002243	Ailuropoda melanoleuca	92.03	0.00e+00	759.00
IUUC-Atr-002502	Amborella trichopoda	49.60	1.00e-138	486.00
IUUC-Apl-003885	Anas platyrhynchos	95.07	0.00e+00	956.00
IUUC-Aca-004854	Anolis carolinensis	69.76	0.00e+00	678.00
IUUC-Aly-006158	Arabidopsis lyrata	48.80	2.00e-138	486.00
IUUC-Ath-007474	Arabidopsis thaliana	50.00	4.00e-140	491.00
IUUC-Ago-007726	Ashbya gossypii	37.12	3.00e-66	245.00
IUUC-Acl-008220	Aspergillus clavatus	43.74	1.00e-124	440.00
IUUC-Afl-008473	Aspergillus flavus	43.40	1.00e-122	433.00
IUUC-Afu-008773	Aspergillus fumigatus	43.86	1.00e-123	436.00
IUUC-Ani-009323	Aspergillus nidulans	43.62	7.00e-119	420.00
IUUC-Ang-009851	Aspergillus niger	43.29	5.00e-123	434.00
IUUC-Aor-009950	Aspergillus oryzae	43.40	1.00e-122	433.00
IUUC-Ate-010372	Aspergillus terreus	44.87	4.00e-124	438.00
IUUC-Ame-011660	Astyanax mexicanus	79.89	0.00e+00	906.00
IUUC-Bgr-012230	Blumeria graminis	44.44	9.00e-115	406.00
IUUC-Bta-012568	Bos taurus	92.93	0.00e+00	958.00
IUUC-Bci-013646	Botrytis cinerea	43.80	2.00e-113	402.00
IUUC-Bdi-014199	Brachypodium distachyon	49.18	1.00e-128	453.00
IUUC-Bol-015695	Brassica oleracea	49.70	1.00e-145	509.00
IUUC-Bra-017923	Brassica rapa	48.07	7.00e-148	516.00
IUUC-Cel-018535	Caenorhabditis elegans	50.00	2.00e-162	565.00
IUUC-Cja-019071	Callithrix jacchus	92.93	0.00e+00	955.00
IUUC-Cfa-020559	Canis familiaris	93.14	0.00e+00	957.00
IUUC-Cpo-022356	Cavia porcellus	92.73	0.00e+00	954.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	41.00	1.00e-62	232.00
IUUC-Csa-023125	Chlorocebus sabaeus	92.93	0.00e+00	957.00
IUUC-Cho-024676	Choloepus hoffmanni	86.88	0.00e+00	859.00
IUUC-Cin-025229	Ciona intestinalis	68.38	0.00e+00	696.00
IUUC-Csv-025868	Ciona savignyi	71.58	8.00e-42	160.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	41.20	3.00e-98	352.00
IUUC-Cne-026885	Cryptococcus neoformans	50.67	2.00e-140	492.00
IUUC-Dre-027631	Danio rerio	78.60	0.00e+00	912.00
IUUC-Dno-029815	Dasypus novemcinctus	82.49	0.00e+00	870.00
IUUC-Dor-031143	Dipodomys ordii	77.21	0.00e+00	777.00
IUUC-Dse-031520	Dothistroma septosporum	45.34	2.00e-84	306.00
IUUC-Dme-032050	Drosophila melanogaster	63.43	0.00e+00	693.00
IUUC-Ete-032866	Echinops telfairi	89.08	0.00e+00	932.00
IUUC-Eca-033384	Equus caballus	93.12	0.00e+00	952.00
IUUC-Eeu-034471	Erinaceus europaeus	77.32	0.00e+00	725.00
IUUC-Fca-035727	Felis catus	92.47	0.00e+00	960.00
IUUC-Fal-036774	Ficedula albicollis	94.16	0.00e+00	966.00
IUUC-Fox-037951	Fusarium oxysporum	43.64	2.00e-114	405.00
IUUC-Fso-038287	Fusarium solani	45.51	3.00e-112	398.00
IUUC-Gmo-039670	Gadus morhua	77.16	0.00e+00	884.00
IUUC-Ggr-039764	Gaeumannomyces graminis	39.73	2.00e-106	379.00
IUUC-Gga-040293	Gallus gallus	92.83	0.00e+00	971.00
IUUC-Gac-042159	Gasterosteus aculeatus	79.32	0.00e+00	926.00
IUUC-Gma-044299	Glycine max	62.54	2.00e-122	432.00
IUUC-Ggo-044864	Gorilla gorilla	93.12	0.00e+00	957.00
IUUC-Hsa-046602	Homo sapiens	93.12	0.00e+00	957.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	95.81	0.00e+00	733.00
IUUC-Kpa-049318	Komagataella pastoris	45.15	1.00e-91	329.00
IUUC-Lch-049796	Latimeria chalumnae	74.26	0.00e+00	774.00
IUUC-Lpe-051153	Leersia perrieri	48.57	3.00e-132	464.00
IUUC-Loc-052467	Lepisosteus oculatus	85.77	0.00e+00	932.00
IUUC-Lma-053107	Leptosphaeria maculans	49.60	6.00e-104	370.00
IUUC-Laf-053787	Loxodonta africana	92.56	0.00e+00	982.00
IUUC-Mcc-055706	Macaca mulatta	92.93	0.00e+00	956.00
IUUC-Meu-056757	Macropus eugenii	77.57	1.00e-159	556.00
IUUC-Mor-057079	Magnaporthe oryzae	38.90	8.00e-101	360.00
IUUC-Mpo-057533	Magnaporthe poae	47.33	2.00e-102	366.00
IUUC-Mtr-057950	Medicago truncatula	61.61	1.00e-122	432.00
IUUC-Mla-058910	Melampsora laricipopulina	45.47	2.00e-131	462.00
IUUC-Mga-059366	Meleagris gallopavo	95.45	0.00e+00	965.00
IUUC-Mvi-060349	Microbotryum violaceum	57.49	1.00e-124	439.00
IUUC-Mmr-061209	Microcebus murinus	93.32	0.00e+00	989.00
IUUC-Mdo-062118	Monodelphis domestica	93.71	0.00e+00	998.00
IUUC-Mmu-063173	Mus musculus	92.53	0.00e+00	956.00
IUUC-Mac-065080	Musa acuminata	50.52	2.00e-138	485.00
IUUC-Mpu-066659	Mustela putorius furo	93.14	0.00e+00	959.00
IUUC-Mlu-067029	Myotis lucifugus	91.36	0.00e+00	932.00
IUUC-Nfi-068334	Neosartorya fischeri	45.34	1.00e-124	440.00
IUUC-Ncr-068675	Neurospora crassa	39.27	3.00e-97	348.00
IUUC-Nle-070113	Nomascus leucogenys	89.17	0.00e+00	962.00
IUUC-Opr-070685	Ochotona princeps	84.28	0.00e+00	900.00
IUUC-Ont-071680	Oreochromis niloticus	80.04	0.00e+00	923.00
IUUC-Oan-073573	Ornithorhynchus anatinus	96.71	0.00e+00	920.00
IUUC-Ocu-074074	Oryctolagus cuniculus	92.73	0.00e+00	986.00
IUUC-Oba-075625	Oryza barthii	50.10	3.00e-131	461.00
IUUC-Obr-076510	Oryza brachyantha	46.99	2.00e-131	462.00
IUUC-Ogl-077275	Oryza glaberrima	50.10	3.00e-131	461.00
IUUC-Ogu-078563	Oryza glumaepatula	50.10	3.00e-131	461.00
IUUC-Oin-079898	Oryza indica	62.01	1.00e-118	419.00
IUUC-Olo-081080	Oryza longistaminata	49.89	1.00e-125	442.00
IUUC-Oni-083121	Oryza nivara	50.10	3.00e-131	461.00
IUUC-Opu-083329	Oryza punctata	48.50	5.00e-131	461.00
IUUC-Oru-084807	Oryza rufipogon	50.84	2.00e-128	452.00
IUUC-Osa-086039	Oryza sativa	50.10	3.00e-131	461.00
IUUC-Ola-087149	Oryzias latipes	82.53	0.00e+00	898.00
IUUC-Olu-087627	Ostreococcus lucimarinus	42.39	8.00e-109	387.00
IUUC-Oga-088359	Otolemur garnettii	92.73	0.00e+00	958.00
IUUC-Oar-089390	Ovis aries	92.93	0.00e+00	955.00
IUUC-Ptr-090894	Pan troglodytes	93.12	0.00e+00	957.00
IUUC-Pan-092476	Papio anubis	92.93	0.00e+00	956.00
IUUC-Pno-094771	Phaeosphaeria nodorum	48.15	1.00e-102	366.00
IUUC-Ppa-095386	Physcomitrella patens	48.09	9.00e-138	483.00
IUUC-Pfo-096139	Poecilia formosa	81.83	0.00e+00	937.00
IUUC-Pab-097838	Pongo abelii	93.00	0.00e+00	914.00
IUUC-Pop-098945	Populus trichocarpa	50.00	5.00e-138	484.00
IUUC-Pca-100876	Procavia capensis	76.62	0.00e+00	800.00
IUUC-Ppe-101777	Prunus persica	49.09	3.00e-135	475.00
IUUC-Pva-102418	Pteropus vampyrus	90.80	0.00e+00	955.00
IUUC-Pgr-103456	Puccinia graminis	49.70	2.00e-143	502.00
IUUC-Ptt-103731	Puccinia triticina	46.92	2.00e-137	482.00
IUUC-Pte-104386	Pyrenophora teres	50.27	4.00e-105	374.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	51.33	2.00e-105	375.00
IUUC-Rno-105694	Rattus norvegicus	87.62	0.00e+00	885.00
IUUC-Sce-106339	Saccharomyces cerevisiae	36.55	1.00e-68	253.00
IUUC-Sha-106709	Sarcophilus harrisii	93.91	0.00e+00	997.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	40.75	4.00e-116	411.00
IUUC-Spo-108331	Schizosaccharomyces pombe	42.01	2.00e-114	405.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	45.74	8.00e-116	410.00
IUUC-Smo-109326	Selaginella moellendorffii	44.95	3.00e-114	405.00
IUUC-Sit-110446	Setaria italica	47.86	1.00e-124	440.00
IUUC-Sly-111330	Solanum lycopersicum	46.68	1.00e-134	473.00
IUUC-Stu-112610	Solanum tuberosum	46.40	7.00e-134	470.00
IUUC-Sar-113065	Sorex araneus	74.67	3.00e-123	434.00
IUUC-Sbi-114005	Sorghum bicolor	62.66	1.00e-120	426.00
IUUC-Sre-114988	Sporisorium reilianum	48.74	4.00e-145	508.00
IUUC-Ssc-115760	Sus scrofa	93.32	0.00e+00	960.00
IUUC-Tgu-116493	Taeniopygia guttata	91.55	0.00e+00	983.00
IUUC-Tru-118489	Takifugu rubripes	77.52	0.00e+00	892.00
IUUC-Tsy-119332	Tarsius syrichta	93.52	0.00e+00	991.00
IUUC-Tni-120202	Tetraodon nigroviridis	76.76	0.00e+00	812.00
IUUC-Tca-121429	Theobroma cacao	61.49	6.00e-121	427.00
IUUC-Tre-122162	Trichoderma reesei	41.96	3.00e-112	398.00
IUUC-Tvi-122500	Trichoderma virens	43.62	7.00e-110	390.00
IUUC-Tae-125557	Triticum aestivum	48.26	3.00e-127	448.00
IUUC-Tur-126554	Triticum urartu	48.56	5.00e-127	447.00
IUUC-Tme-126919	Tuber melanosporum	46.53	8.00e-128	450.00
IUUC-Tbe-127968	Tupaia belangeri	87.43	0.00e+00	913.00
IUUC-Ttr-129215	Tursiops truncatus	89.71	0.00e+00	957.00
IUUC-Uma-129622	Ustilago maydis	47.48	3.00e-145	508.00
IUUC-Vda-129750	Verticillium dahliae	43.79	1.00e-112	400.00
IUUC-Vpa-130617	Vicugna pacos	91.88	0.00e+00	883.00
IUUC-Vvi-131238	Vitis vinifera	60.52	2.00e-119	422.00
IUUC-Xtr-131865	Xenopus tropicalis	88.22	0.00e+00	946.00
IUUC-Xma-133627	Xiphophorus maculatus	82.01	0.00e+00	940.00
IUUC-Yli-134390	Yarrowia lipolytica	44.03	8.00e-106	377.00
IUUC-Zma-134910	Zea mays	49.29	3.00e-131	461.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence