iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ame-011643

Ensembl Protein ID

ENSAMXP00000022271.1

UniProt Accession

W5LQH4; W5LQH4_ASTMX

Genbank Protein ID

ENSAMXP00000022271

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

APWO01093803

Gene Name

DDB1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMXG00000021624.1	ENSAMXT00000022271.1	ENSAMXP00000022271.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/DCX/DDB1	46.51	0.00e+00	986.00	IUUC-Ath-006658
E3 adaptor/Cullin RING/DCX/DDB1	33.11	5.00e-178	622.00	IUUC-Cel-018239
E3 adaptor/Cullin RING/DCX/DDB1	54.50	0.00e+00	1171.00	IUUC-Dme-031940
E3 adaptor/Cullin RING/DCX/DDB1	81.09	0.00e+00	1840.00	IUUC-Hsa-046709

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Astyanax mexicanus

Protein Sequence
(Fasta)

MSYNYVVTAQ KPTAVNACIT GHFTSAEDLN LLIAKNTRLE IYVVTAEGLR PVKEVGMYGK 60
IAVMELFRPK GESKDLLFIL TAKYNACILE YKQNGDSIDI ITRAHGNVQD RIGRPSETGI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCTACA ACTACGTGGT GACGGCGCAG AAGCCCACGG CGGTGAACGC CTGCATCACC 60
GGTGAGAGAG CGCGGGGACT GGGCTGCGTG TGGCTGCGCT TCCCGCCGCC GTCAGGCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004871--Cleavage/polyA-sp_fac_asu_C
IPR031297--DDB1
IPR015943--WD40/YVTN_repeat-like_dom

Pfam

PF03178--CPSF_A

Gene Ontology

GO:0005634--C:nucleus
GO:0003676--F:nucleic acid binding
GO:0006281--P:DNA repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000120	Aegilops tauschii	43.58	0.00e+00	918.00
IUUC-Aml-002096	Ailuropoda melanoleuca	81.18	0.00e+00	1860.00
IUUC-Atr-002742	Amborella trichopoda	46.85	0.00e+00	996.00
IUUC-Apl-003624	Anas platyrhynchos	80.02	0.00e+00	1809.00
IUUC-Aca-005085	Anolis carolinensis	80.92	0.00e+00	1850.00
IUUC-Aly-005857	Arabidopsis lyrata	46.60	0.00e+00	993.00
IUUC-Ath-006658	Arabidopsis thaliana	46.78	0.00e+00	993.00
IUUC-Acl-008149	Aspergillus clavatus	25.06	1.00e-90	328.00
IUUC-Afl-008549	Aspergillus flavus	26.07	8.00e-89	322.00
IUUC-Afu-009076	Aspergillus fumigatus	25.19	9.00e-94	338.00
IUUC-Ani-009302	Aspergillus nidulans	24.32	2.00e-67	251.00
IUUC-Ang-009636	Aspergillus niger	25.03	1.00e-57	218.00
IUUC-Aor-010073	Aspergillus oryzae	26.17	2.00e-93	337.00
IUUC-Ate-010422	Aspergillus terreus	24.49	6.00e-80	292.00
IUUC-Bgr-012164	Blumeria graminis	25.10	9.00e-80	292.00
IUUC-Bta-012494	Bos taurus	81.18	0.00e+00	1860.00
IUUC-Bci-013957	Botrytis cinerea	25.06	5.00e-68	253.00
IUUC-Bdi-014186	Brachypodium distachyon	45.29	0.00e+00	956.00
IUUC-Bol-015922	Brassica oleracea	46.95	0.00e+00	1001.00
IUUC-Bra-017300	Brassica rapa	46.86	0.00e+00	993.00
IUUC-Cel-018239	Caenorhabditis elegans	33.45	1.00e-180	627.00
IUUC-Cja-019165	Callithrix jacchus	81.09	0.00e+00	1858.00
IUUC-Cfa-020406	Canis familiaris	81.18	0.00e+00	1860.00
IUUC-Cpo-022154	Cavia porcellus	81.09	0.00e+00	1860.00
IUUC-Cre-022557	Chlamydomonas reinhardtii	37.27	0.00e+00	652.00
IUUC-Csa-024061	Chlorocebus sabaeus	81.09	0.00e+00	1858.00
IUUC-Cho-024554	Choloepus hoffmanni	78.33	0.00e+00	797.00
IUUC-Cin-025466	Ciona intestinalis	55.20	0.00e+00	1271.00
IUUC-Csv-026370	Ciona savignyi	53.69	0.00e+00	1127.00
IUUC-Cgl-026595	Colletotrichum gloeosporioides	24.66	2.00e-81	297.00
IUUC-Cme-027342	Cyanidioschyzon merolae	25.67	5.00e-92	333.00
IUUC-Dre-027448	Danio rerio	93.76	0.00e+00	990.00
IUUC-Dno-029794	Dasypus novemcinctus	81.44	0.00e+00	1755.00
IUUC-Dor-030789	Dipodomys ordii	63.31	0.00e+00	668.00
IUUC-Dse-031491	Dothistroma septosporum	27.02	1.00e-98	354.00
IUUC-Dme-031940	Drosophila melanogaster	54.54	0.00e+00	1171.00
IUUC-Ete-032913	Echinops telfairi	70.51	0.00e+00	728.00
IUUC-Eca-033777	Equus caballus	80.66	0.00e+00	1848.00
IUUC-Eeu-034900	Erinaceus europaeus	77.80	0.00e+00	878.00
IUUC-Fca-035869	Felis catus	81.18	0.00e+00	1860.00
IUUC-Fal-036777	Ficedula albicollis	81.09	0.00e+00	1856.00
IUUC-Fox-037954	Fusarium oxysporum	24.84	8.00e-81	295.00
IUUC-Fso-038292	Fusarium solani	24.88	9.00e-86	312.00
IUUC-Gmo-038815	Gadus morhua	77.02	0.00e+00	853.00
IUUC-Ggr-039907	Gaeumannomyces graminis	24.13	6.00e-70	259.00
IUUC-Gga-040995	Gallus gallus	80.92	0.00e+00	1858.00
IUUC-Gac-042390	Gasterosteus aculeatus	83.70	0.00e+00	1789.00
IUUC-Gma-042904	Glycine max	46.90	0.00e+00	952.00
IUUC-Ggo-044891	Gorilla gorilla	81.27	0.00e+00	1862.00
IUUC-Hsa-046709	Homo sapiens	81.09	0.00e+00	1858.00
IUUC-Hvu-047504	Hordeum vulgare	45.43	0.00e+00	944.00
IUUC-Itr-048678	Ictidomys tridecemlineatus	81.09	0.00e+00	1859.00
IUUC-Lch-050565	Latimeria chalumnae	80.92	0.00e+00	1845.00
IUUC-Lpe-051260	Leersia perrieri	45.74	0.00e+00	964.00
IUUC-Loc-052091	Lepisosteus oculatus	81.10	0.00e+00	1432.00
IUUC-Lma-053246	Leptosphaeria maculans	24.12	8.00e-81	295.00
IUUC-Laf-053502	Loxodonta africana	81.01	0.00e+00	1856.00
IUUC-Mcc-054802	Macaca mulatta	81.03	0.00e+00	1842.00
IUUC-Meu-056808	Macropus eugenii	74.15	0.00e+00	1091.00
IUUC-Mor-057253	Magnaporthe oryzae	24.48	7.00e-62	233.00
IUUC-Mpo-057562	Magnaporthe poae	24.51	7.00e-71	262.00
IUUC-Mtr-057743	Medicago truncatula	46.12	0.00e+00	973.00
IUUC-Mla-059154	Melampsora laricipopulina	23.47	4.00e-62	233.00
IUUC-Mga-059824	Meleagris gallopavo	79.89	0.00e+00	1725.00
IUUC-Mvi-060279	Microbotryum violaceum	25.60	5.00e-88	319.00
IUUC-Mmr-061215	Microcebus murinus	81.01	0.00e+00	1854.00
IUUC-Mdo-062028	Monodelphis domestica	78.18	0.00e+00	1490.00
IUUC-Mmu-064327	Mus musculus	81.27	0.00e+00	1862.00
IUUC-Mac-065445	Musa acuminata	47.00	0.00e+00	961.00
IUUC-Mpu-065814	Mustela putorius furo	78.14	0.00e+00	1765.00
IUUC-Mlu-067136	Myotis lucifugus	81.27	0.00e+00	1856.00
IUUC-Nfi-068355	Neosartorya fischeri	25.10	1.00e-90	328.00
IUUC-Ncr-068620	Neurospora crassa	24.02	6.00e-65	243.00
IUUC-Nle-069566	Nomascus leucogenys	80.94	0.00e+00	1830.00
IUUC-Opr-070915	Ochotona princeps	71.55	0.00e+00	1437.00
IUUC-Ont-071753	Oreochromis niloticus	85.60	0.00e+00	1919.00
IUUC-Oan-073187	Ornithorhynchus anatinus	80.10	0.00e+00	1655.00
IUUC-Ocu-074619	Oryctolagus cuniculus	81.27	0.00e+00	1864.00
IUUC-Oba-075091	Oryza barthii	43.01	2.00e-180	627.00
IUUC-Obr-076425	Oryza brachyantha	46.23	0.00e+00	956.00
IUUC-Ogu-078794	Oryza glumaepatula	45.82	0.00e+00	961.00
IUUC-Oin-079725	Oryza indica	45.47	0.00e+00	945.00
IUUC-Olo-080842	Oryza longistaminata	43.71	0.00e+00	859.00
IUUC-Ome-081818	Oryza meridionalis	45.90	0.00e+00	964.00
IUUC-Oni-082879	Oryza nivara	45.73	0.00e+00	954.00
IUUC-Opu-083361	Oryza punctata	45.23	0.00e+00	951.00
IUUC-Oru-084781	Oryza rufipogon	45.82	0.00e+00	961.00
IUUC-Osa-086293	Oryza sativa	45.82	0.00e+00	961.00
IUUC-Ola-086881	Oryzias latipes	85.60	0.00e+00	1929.00
IUUC-Olu-087674	Ostreococcus lucimarinus	41.16	0.00e+00	794.00
IUUC-Oga-089056	Otolemur garnettii	81.27	0.00e+00	1860.00
IUUC-Oar-089457	Ovis aries	81.25	0.00e+00	1830.00
IUUC-Ptr-091179	Pan troglodytes	80.79	0.00e+00	1819.00
IUUC-Pan-092019	Papio anubis	81.13	0.00e+00	1857.00
IUUC-Psi-093407	Pelodiscus sinensis	80.47	0.00e+00	1813.00
IUUC-Pma-094272	Petromyzon marinus	76.37	0.00e+00	1585.00
IUUC-Pno-094864	Phaeosphaeria nodorum	24.64	9.00e-85	308.00
IUUC-Ppa-095885	Physcomitrella patens	47.51	0.00e+00	973.00
IUUC-Pfo-096083	Poecilia formosa	85.43	0.00e+00	1919.00
IUUC-Pab-098652	Pongo abelii	78.18	0.00e+00	1774.00
IUUC-Pop-099593	Populus trichocarpa	47.24	0.00e+00	950.00
IUUC-Pca-100189	Procavia capensis	79.33	0.00e+00	1043.00
IUUC-Ppe-101987	Prunus persica	46.90	0.00e+00	934.00
IUUC-Pva-102605	Pteropus vampyrus	81.01	0.00e+00	1854.00
IUUC-Pgr-103659	Puccinia graminis	23.14	2.00e-57	218.00
IUUC-Ptt-103884	Puccinia triticina	21.72	9.00e-45	176.00
IUUC-Pte-104233	Pyrenophora teres	24.94	1.00e-89	325.00
IUUC-Pyt-104454	Pyrenophora triticirepentis	24.76	2.00e-88	320.00
IUUC-Rno-106004	Rattus norvegicus	81.18	0.00e+00	1860.00
IUUC-Sha-106726	Sarcophilus harrisii	78.12	0.00e+00	1659.00
IUUC-Sja-107864	Schizosaccharomyces japonicus	22.78	3.00e-56	214.00
IUUC-Spo-108029	Schizosaccharomyces pombe	23.75	2.00e-80	294.00
IUUC-Ssl-108441	Sclerotinia sclerotiorum	24.52	2.00e-64	241.00
IUUC-Smo-108808	Selaginella moellendorffii	47.15	0.00e+00	1025.00
IUUC-Sit-109735	Setaria italica	46.03	0.00e+00	953.00
IUUC-Sly-111520	Solanum lycopersicum	46.40	0.00e+00	962.00
IUUC-Sar-113606	Sorex araneus	82.95	3.00e-100	360.00
IUUC-Sbi-114539	Sorghum bicolor	45.29	0.00e+00	942.00
IUUC-Sre-114936	Sporisorium reilianum	23.45	5.00e-40	160.00
IUUC-Ssc-116038	Sus scrofa	81.18	0.00e+00	1858.00
IUUC-Tgu-117512	Taeniopygia guttata	80.75	0.00e+00	1852.00
IUUC-Tru-117593	Takifugu rubripes	84.91	0.00e+00	1915.00
IUUC-Tsy-119513	Tarsius syrichta	69.64	0.00e+00	825.00
IUUC-Tni-120551	Tetraodon nigroviridis	78.42	0.00e+00	1505.00
IUUC-Tca-121505	Theobroma cacao	47.67	0.00e+00	975.00
IUUC-Tre-122136	Trichoderma reesei	24.92	6.00e-82	299.00
IUUC-Tvi-122512	Trichoderma virens	24.52	9.00e-82	298.00
IUUC-Tae-122891	Triticum aestivum	45.34	0.00e+00	944.00
IUUC-Tur-126451	Triticum urartu	45.28	0.00e+00	841.00
IUUC-Tme-127057	Tuber melanosporum	25.18	5.00e-81	296.00
IUUC-Ttr-128891	Tursiops truncatus	77.12	0.00e+00	1192.00
IUUC-Uma-129583	Ustilago maydis	23.79	4.00e-34	140.00
IUUC-Vda-129870	Verticillium dahliae	25.10	5.00e-77	283.00
IUUC-Vpa-130117	Vicugna pacos	75.24	0.00e+00	1343.00
IUUC-Vvi-131033	Vitis vinifera	46.82	0.00e+00	974.00
IUUC-Xtr-131987	Xenopus tropicalis	79.50	0.00e+00	1808.00
IUUC-Xma-134117	Xiphophorus maculatus	83.56	0.00e+00	1870.00
IUUC-Zma-134758	Zea mays	46.16	0.00e+00	959.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence