iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-088919

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03077863

Gene Name

WDR90

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000005412.2	ENSOGAT00000005416.2	ENSOGAP00000004843.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-34	116.6	1439	1472
UBD/Beta-Prp	5.10e-77	259.0	1310	1610

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH ++v+ +af ++  + ++++ Dg+++vW+l +
   Q: 1439 GHWSKVNEVAFsPNeSHCATCGEDGSVRVWSLAS 1472
           68899*******7779***************866 PP

UBD/Beta-Prp

   S: 56   tavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee........... 131
           t++++ p   +l  gs+ + ++vwd ++g c+ ++++ ++++  l  s   ++lvsGs+   +r+w + t  +l++           
   Q: 1310 TSLCYGPLP-LLYCGSSSGQVCVWDTRAGHCFLAWEADDSEIGMLLCSG--SRLVSGSSAGRLRLWAVGTLPELRHkgarscsvfme 1393
           444444442.444555555555555555555555555555555554444..555555555555555555555555555555555555 PP
   S: 132  ..........................................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtlt 176
                                                     + sgh + vn v+++p+++ +++++ D+ vr+W+l++ +l+ +++
   Q: 1394 celsldgaivsasfddsmemgvvgtmastlwyvswvegtstrLVSGHWSKVNEVAFSPNESHCATCGEDGSVRVWSLASLELVIQFQ 1480
           55555555555555555555555555555555555555555599******************************************* PP
   S: 177  gghtdsvyslsfdsng......kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdll 257
              ++s  +l++++++      ++l++g  dgt++l++++++ +  +++ h +  + v+fs +++ ++sg +Dg + +  l +g + 
   Q: 1481 V-LNQSCLCLAWSPQScgrpeqQRLAAGYSDGTLRLFSVSRTVMELKMHPHLAALTAVAFSTDGQTILSGDKDGLVAVSHLCTGMTF 1566
           8.************99999999***************************************************************** PP
   S: 258  ktlqlhn.ssvisvav.......lsfgdnvl.vlgsedskvniw 292
           ++++ h+   ++ ++        +++++  l +++s+d++v iw
   Q: 1567 RVVSDHRgAPISTIQItskehgdFGVEGTDLwLAASGDQRVSIW 1610
           *****99744444554334445545555555455666******9 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

RPSAWQQPFL NIFRHFRVDE WKRSAKEGDV AVVTDKTLKG TVYRIRASIS TGSYIQLPRI 60
STQSLGLTGR YLYVLFRPLS SKHFVIHLDV STEDSQVIRV SFSSLFKEFK STATWLQFPF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTCCCTCAG CGTGGCAGCA GCCGTTTCTC AACATCTTCA GACACTTCAG AGTGGACGAG 60
TGGAAGCGAT CCGCCAAGGA GGGGGATGTG GCCGTAGTGA CGGTGCGTGG GCTGGGGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR007714--CFA20/WDR90/C3orf67
IPR011047--Quinoprotein_ADH-like_supfam
IPR023294--Tachylectin2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR030466--WDR90

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF05018--DUF667
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001801	Ailuropoda melanoleuca	68.26	0.00e+00	1363.00
IUUC-Apl-003387	Anas platyrhynchos	52.78	0.00e+00	948.00
IUUC-Aca-005235	Anolis carolinensis	51.70	0.00e+00	1578.00
IUUC-Ame-011595	Astyanax mexicanus	47.78	0.00e+00	970.00
IUUC-Bta-012328	Bos taurus	65.75	0.00e+00	2196.00
IUUC-Cja-019058	Callithrix jacchus	69.78	0.00e+00	2164.00
IUUC-Cfa-020934	Canis familiaris	63.22	0.00e+00	2058.00
IUUC-Cpo-022025	Cavia porcellus	66.74	0.00e+00	2259.00
IUUC-Cre-022928	Chlamydomonas reinhardtii	26.52	1.00e-56	216.00
IUUC-Csa-023022	Chlorocebus sabaeus	71.71	0.00e+00	2391.00
IUUC-Cin-025133	Ciona intestinalis	39.20	3.00e-139	490.00
IUUC-Csv-025816	Ciona savignyi	37.67	4.00e-132	466.00
IUUC-Dre-028823	Danio rerio	46.59	0.00e+00	917.00
IUUC-Dno-029211	Dasypus novemcinctus	70.67	0.00e+00	871.00
IUUC-Dor-030211	Dipodomys ordii	69.93	0.00e+00	2037.00
IUUC-Ete-032363	Echinops telfairi	57.81	0.00e+00	887.00
IUUC-Eca-034296	Equus caballus	68.42	0.00e+00	1288.00
IUUC-Eeu-035226	Erinaceus europaeus	58.51	0.00e+00	833.00
IUUC-Fca-035384	Felis catus	67.23	0.00e+00	1334.00
IUUC-Fal-037660	Ficedula albicollis	52.80	0.00e+00	956.00
IUUC-Gga-040666	Gallus gallus	60.46	0.00e+00	885.00
IUUC-Gac-041358	Gasterosteus aculeatus	43.15	0.00e+00	1377.00
IUUC-Ggo-045121	Gorilla gorilla	73.96	0.00e+00	2472.00
IUUC-Hsa-046289	Homo sapiens	74.49	0.00e+00	2432.00
IUUC-Itr-048485	Ictidomys tridecemlineatus	67.88	0.00e+00	2206.00
IUUC-Lch-050009	Latimeria chalumnae	46.99	0.00e+00	1581.00
IUUC-Loc-052629	Lepisosteus oculatus	45.90	0.00e+00	840.00
IUUC-Mcc-055834	Macaca mulatta	69.11	0.00e+00	2186.00
IUUC-Meu-056162	Macropus eugenii	49.11	0.00e+00	904.00
IUUC-Mga-060167	Meleagris gallopavo	49.57	0.00e+00	848.00
IUUC-Mmr-060761	Microcebus murinus	83.01	5.00e-149	520.00
IUUC-Mdo-061886	Monodelphis domestica	56.67	0.00e+00	2064.00
IUUC-Mmu-063652	Mus musculus	65.51	0.00e+00	2280.00
IUUC-Mlu-068141	Myotis lucifugus	66.23	0.00e+00	1311.00
IUUC-Nle-069133	Nomascus leucogenys	69.87	0.00e+00	1569.00
IUUC-Ont-072496	Oreochromis niloticus	46.72	0.00e+00	1632.00
IUUC-Oan-072833	Ornithorhynchus anatinus	47.89	0.00e+00	867.00
IUUC-Ola-086564	Oryzias latipes	45.75	0.00e+00	1552.00
IUUC-Oar-089946	Ovis aries	71.12	0.00e+00	919.00
IUUC-Ptr-090755	Pan troglodytes	73.36	0.00e+00	2050.00
IUUC-Pan-092054	Papio anubis	71.03	0.00e+00	2409.00
IUUC-Psi-093467	Pelodiscus sinensis	53.69	0.00e+00	1058.00
IUUC-Pma-094553	Petromyzon marinus	44.86	2.00e-159	557.00
IUUC-Pfo-096849	Poecilia formosa	44.87	0.00e+00	838.00
IUUC-Pab-098320	Pongo abelii	73.99	0.00e+00	2189.00
IUUC-Pca-100172	Procavia capensis	63.20	0.00e+00	1983.00
IUUC-Pva-102772	Pteropus vampyrus	68.60	0.00e+00	1310.00
IUUC-Rno-105046	Rattus norvegicus	65.89	0.00e+00	2309.00
IUUC-Sha-107094	Sarcophilus harrisii	56.72	0.00e+00	2103.00
IUUC-Ssc-116257	Sus scrofa	63.74	0.00e+00	2097.00
IUUC-Tgu-117323	Taeniopygia guttata	60.94	0.00e+00	847.00
IUUC-Tru-118717	Takifugu rubripes	44.84	0.00e+00	1472.00
IUUC-Tni-120108	Tetraodon nigroviridis	43.90	0.00e+00	865.00
IUUC-Ttr-128378	Tursiops truncatus	70.24	0.00e+00	1639.00
IUUC-Xtr-131760	Xenopus tropicalis	48.17	0.00e+00	1612.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence