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Tag Content
iUUCD ID IUUC-Tru-118651
Ensembl Protein ID ENSTRUP00000023298.1
UniProt Accession H2TF55; H2TF55_TAKRU
Protein Name Uncharacterized protein
Gene Name rad23b
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSTRUG00000009265.1 ENSTRUT00000023394.1 ENSTRUP00000023297.1
ENSTRUG00000009265.1 ENSTRUT00000023395.1 ENSTRUP00000023298.1
ENSTRUG00000009265.1 ENSTRUT00000023396.1 ENSTRUP00000023299.1
ENSTRUG00000009265.1 ENSTRUT00000023397.1 ENSTRUP00000023300.1
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/Alpha-Helix/UBA 1.10e-19 71.2 176 214
ULD/UDP/UBQ/UBQ_PIM 1.20e-23 84.0 1 78
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLldg 41
    +e+++++++ MG+dre+++ aLra++nn+++AveyLl+g
   Q: 176 YESMVNEIMLMGYDREQVVVALRASFNNPDRAVEYLLTG 214
    79***********************************97 PP
   


   ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
    m +t+ktl++++f++e++e++tv+ lKe+i++e+g +p++ +kLIyaG iL+D ++L+e++i+d+++v+++ +k+k
   Q: 1 MLITLKTLQQQTFKIEIDEEETVKTLKERIEAEKGkdnFPVSGLKLIYAGVILNDVKPLKEYNISDKNFVVVMATKPK 78
    789***********************************************************************9987 PP
   

Organism Takifugu rubripes
Protein Sequence
(Fasta)
MLITLKTLQQ QTFKIEIDEE ETVKTLKERI EAEKGKDNFP VSGLKLIYAG VILNDVKPLK 60
EYNISDKNFV VVMATKPKTA PAATQPSPAA SGPCTAAPPA PGACSTVSEV PTQQTTKEDN 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Tru-118651|UBD,UBA;ULD,UBQ_PIM|Takifugu rubripes
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCAGTACCCG CAGCGGCCAC TGGGGGAGCC GCTGCGCTCA TTTCAACCAC AGAAGAAGAA 60
GAACGTGAAC ATCATGGCGG TTGACACTTT GTAATGAGCC AACAAAATAG CAAAATTTCC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Tru-118651|UBD,UBA;ULD,UBQ_PIM|Takifugu rubripes
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001195 Ailuropoda melanoleuca 60.71 2.00e-59 222.00
IUUC-Atr-002756 Amborella trichopoda 35.04 8.00e-51 194.00
IUUC-Apl-003371 Anas platyrhynchos 52.84 6.00e-75 274.00
IUUC-Aca-004599 Anolis carolinensis 56.49 3.00e-59 222.00
IUUC-Ago-007830 Ashbya gossypii 30.87 2.00e-16 79.70
IUUC-Afl-008605 Aspergillus flavus 34.62 3.00e-26 112.00
IUUC-Afu-008877 Aspergillus fumigatus 34.90 1.00e-24 107.00
IUUC-Ani-009460 Aspergillus nidulans 38.96 6.00e-31 128.00
IUUC-Aor-010032 Aspergillus oryzae 34.62 3.00e-26 112.00
IUUC-Bgr-012056 Blumeria graminis 31.79 7.00e-33 134.00
IUUC-Bta-012377 Bos taurus 49.75 1.00e-82 299.00
IUUC-Bdi-014355 Brachypodium distachyon 32.77 2.00e-44 172.00
IUUC-Bol-015272 Brassica oleracea 33.58 5.00e-48 184.00
IUUC-Bra-016952 Brassica rapa 37.87 5.00e-36 145.00
IUUC-Cja-018772 Callithrix jacchus 62.61 7.00e-62 231.00
IUUC-Cfa-020683 Canis familiaris 58.84 5.00e-62 231.00
IUUC-Cpo-022145 Cavia porcellus 61.83 2.00e-62 233.00
IUUC-Csa-023714 Chlorocebus sabaeus 54.22 1.00e-91 330.00
IUUC-Cho-024814 Choloepus hoffmanni 46.53 1.00e-67 250.00
IUUC-Csv-025823 Ciona savignyi 38.80 4.00e-38 151.00
IUUC-Cgl-026495 Colletotrichum gloeosporioides 28.84 8.00e-16 77.80
IUUC-Cme-027260 Cyanidioschyzon merolae 30.04 1.00e-22 100.00
IUUC-Dre-027581 Danio rerio 48.78 9.00e-74 270.00
IUUC-Dno-029543 Dasypus novemcinctus 62.18 5.00e-63 234.00
IUUC-Dme-032027 Drosophila melanogaster 37.24 1.00e-61 230.00
IUUC-Ete-032583 Echinops telfairi 60.70 2.00e-43 170.00
IUUC-Eca-034243 Equus caballus 63.45 3.00e-62 232.00
IUUC-Eeu-034721 Erinaceus europaeus 59.72 1.00e-44 173.00
IUUC-Fca-035679 Felis catus 63.87 3.00e-62 232.00
IUUC-Fal-037148 Ficedula albicollis 58.50 5.00e-61 228.00
IUUC-Fox-037960 Fusarium oxysporum 35.00 2.00e-17 83.60
IUUC-Fso-038107 Fusarium solani 37.79 1.00e-21 97.40
IUUC-Gmo-038751 Gadus morhua 58.77 7.00e-64 236.00
IUUC-Gga-040544 Gallus gallus 53.06 3.00e-81 295.00
IUUC-Gac-042239 Gasterosteus aculeatus 66.83 1.00e-113 402.00
IUUC-Gma-044245 Glycine max 35.68 8.00e-50 191.00
IUUC-Ggo-045125 Gorilla gorilla 61.20 8.00e-63 234.00
IUUC-Hsa-046519 Homo sapiens 61.20 8.00e-63 234.00
IUUC-Itr-048295 Ictidomys tridecemlineatus 62.61 1.00e-60 227.00
IUUC-Lch-050553 Latimeria chalumnae 59.55 4.00e-54 205.00
IUUC-Laf-054293 Loxodonta africana 62.61 9.00e-62 230.00
IUUC-Mcc-055600 Macaca mulatta 59.21 1.00e-63 236.00
IUUC-Meu-056082 Macropus eugenii 57.71 4.00e-53 201.00
IUUC-Mor-057287 Magnaporthe oryzae 31.94 2.00e-16 80.10
IUUC-Mtr-058239 Medicago truncatula 32.37 1.00e-47 183.00
IUUC-Mmr-061159 Microcebus murinus 63.90 2.00e-62 232.00
IUUC-Mdo-061967 Monodelphis domestica 61.57 7.00e-59 221.00
IUUC-Mmu-063258 Mus musculus 58.66 7.00e-64 237.00
IUUC-Mac-064468 Musa acuminata 32.46 2.00e-47 182.00
IUUC-Mpu-066389 Mustela putorius furo 60.80 1.00e-60 226.00
IUUC-Mlu-067999 Myotis lucifugus 63.45 1.00e-60 226.00
IUUC-Nfi-068390 Neosartorya fischeri 34.51 1.00e-24 107.00
IUUC-Nle-069655 Nomascus leucogenys 59.21 2.00e-64 239.00
IUUC-Ont-072484 Oreochromis niloticus 59.16 1.00e-116 412.00
IUUC-Oan-073572 Ornithorhynchus anatinus 52.01 3.00e-84 305.00
IUUC-Ocu-074831 Oryctolagus cuniculus 64.71 2.00e-62 233.00
IUUC-Obr-076909 Oryza brachyantha 30.92 1.00e-44 174.00
IUUC-Ogl-077067 Oryza glaberrima 33.41 7.00e-48 184.00
IUUC-Ola-086540 Oryzias latipes 70.85 8.00e-73 267.00
IUUC-Oga-088023 Otolemur garnettii 64.05 1.00e-62 233.00
IUUC-Ptr-091165 Pan troglodytes 61.20 1.00e-62 233.00
IUUC-Psi-093477 Pelodiscus sinensis 55.16 1.00e-52 200.00
IUUC-Ppa-095654 Physcomitrella patens 38.80 5.00e-36 145.00
IUUC-Pfo-097385 Poecilia formosa 70.17 7.00e-79 287.00
IUUC-Pab-097868 Pongo abelii 61.20 4.00e-62 231.00
IUUC-Pop-099642 Populus trichocarpa 34.36 6.00e-48 184.00
IUUC-Pca-100652 Procavia capensis 57.84 1.00e-39 157.00
IUUC-Ppe-101522 Prunus persica 34.30 2.00e-48 186.00
IUUC-Pva-102412 Pteropus vampyrus 50.25 3.00e-84 305.00
IUUC-Rno-104844 Rattus norvegicus 58.87 5.00e-64 238.00
IUUC-Sha-107073 Sarcophilus harrisii 61.98 3.00e-59 221.00
IUUC-Smo-109129 Selaginella moellendorffii 30.30 1.00e-36 146.00
IUUC-Sit-109813 Setaria italica 33.01 5.00e-45 174.00
IUUC-Sly-111480 Solanum lycopersicum 34.45 6.00e-51 194.00
IUUC-Stu-112054 Solanum tuberosum 34.75 1.00e-50 193.00
IUUC-Sbi-114459 Sorghum bicolor 31.07 6.00e-43 167.00
IUUC-Ssc-116329 Sus scrofa 63.03 2.00e-62 233.00
IUUC-Tgu-116918 Taeniopygia guttata 54.92 1.00e-92 333.00
IUUC-Tca-121594 Theobroma cacao 33.25 6.00e-46 177.00
IUUC-Tvi-122617 Trichoderma virens 37.75 2.00e-25 109.00
IUUC-Tae-125230 Triticum aestivum 30.00 7.00e-34 137.00
IUUC-Tme-127092 Tuber melanosporum 33.18 2.00e-21 96.70
IUUC-Ttr-128464 Tursiops truncatus 63.45 3.00e-62 232.00
IUUC-Vpa-130357 Vicugna pacos 53.68 4.00e-39 155.00
IUUC-Xtr-132679 Xenopus tropicalis 62.50 3.00e-52 199.00
IUUC-Xma-133503 Xiphophorus maculatus 62.41 7.00e-109 387.00
Created Date 25-Jun-2017

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