iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126144

Ensembl Protein ID

TRIUR3_24946-P1

UniProt Accession

M7Z504; M7Z504_TRIUA

Genbank Protein ID

EMS58233.1

Protein Name

Putative DNA repair protein RAD23-1

Genbank Nucleotide ID

KD135158

Gene Name

TRIUR3_24946

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_24946	TRIUR3_24946-T1	TRIUR3_24946-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.30e-22	79.9	146	186
ULD/UDP/UBQ/UBQ_PIM	1.30e-21	77.0	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 4    edkleqlveMG...FdreealqaLraannnleaAveyLldg 41
             +++q++eMG   +dr+++++aLraa+nn+e+A++yL++g
   Q: 146  DTMINQIMEMGggsWDRDKVQRALRAAYNNPERAIDYLYSG 186
           679***********************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mkltvktlkg++fe++v+ +dt+ ++K++i++ +g   +p  qq LI++Gk+LkD++tL e++++++ +++++++ksk
   Q: 1    MKLTVKTLKGTHFEIRVQHNDTIMAVKKNIEEIQGkdsYPWGQQLLIHNGKVLKDESTLDENQVSEDGFLVVMLSKSK 78
           99*************************************************************************997 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MKLTVKTLKG THFEIRVQHN DTIMAVKKNI EEIQGKDSYP WGQQLLIHNG KVLKDESTLD 60
ENQVSEDGFL VVMLSKSKAS ASSGASSAQP SSTPVTSQAP PVAQPQAPQP QVPSTTTSQP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGCTGA CGGTGAAGAC TCTCAAGGGC ACCCACTTCG AGATCCGGGT CCAGCACAAT 60
GACACCGTGA GATTCCCCCC GCCCGCTCCC CTCGTTTAGT TTCAAATCTC CCCGACTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000088	Aegilops tauschii	86.59	4.00e-164	570.00
IUUC-Atr-002756	Amborella trichopoda	50.44	1.00e-92	332.00
IUUC-Bdi-014355	Brachypodium distachyon	74.02	1.00e-146	511.00
IUUC-Bol-015272	Brassica oleracea	52.63	1.00e-94	338.00
IUUC-Bra-016970	Brassica rapa	54.84	1.00e-99	355.00
IUUC-Cho-024814	Choloepus hoffmanni	36.80	6.00e-17	80.50
IUUC-Csv-025823	Ciona savignyi	33.85	4.00e-21	94.00
IUUC-Ete-032583	Echinops telfairi	36.80	2.00e-16	79.30
IUUC-Gma-044245	Glycine max	54.69	7.00e-106	376.00
IUUC-Hvu-047738	Hordeum vulgare	77.71	6.00e-105	372.00
IUUC-Lpe-051168	Leersia perrieri	54.59	4.00e-105	373.00
IUUC-Mac-064468	Musa acuminata	56.55	2.00e-112	397.00
IUUC-Oba-074972	Oryza barthii	55.73	4.00e-106	376.00
IUUC-Obr-076909	Oryza brachyantha	65.22	8.00e-133	465.00
IUUC-Ogl-077067	Oryza glaberrima	64.53	2.00e-134	470.00
IUUC-Ogu-078023	Oryza glumaepatula	62.66	6.00e-114	402.00
IUUC-Oin-079203	Oryza indica	64.68	2.00e-135	474.00
IUUC-Olo-080559	Oryza longistaminata	62.84	4.00e-127	446.00
IUUC-Oni-082812	Oryza nivara	55.73	6.00e-106	376.00
IUUC-Opu-083963	Oryza punctata	56.06	1.00e-101	362.00
IUUC-Osa-085951	Oryza sativa	64.91	2.00e-135	474.00
IUUC-Psi-093477	Pelodiscus sinensis	37.93	3.00e-14	71.60
IUUC-Pop-100054	Populus trichocarpa	52.05	1.00e-93	335.00
IUUC-Ppe-101522	Prunus persica	51.66	2.00e-99	354.00
IUUC-Sit-109813	Setaria italica	65.90	2.00e-129	454.00
IUUC-Stu-112306	Solanum tuberosum	51.66	3.00e-96	344.00
IUUC-Sbi-114459	Sorghum bicolor	66.28	9.00e-134	468.00
IUUC-Tsy-118836	Tarsius syrichta	36.80	1.00e-16	80.10
IUUC-Tca-121594	Theobroma cacao	52.95	3.00e-98	350.00
IUUC-Tae-123231	Triticum aestivum	82.03	1.00e-159	554.00
IUUC-Tbe-127493	Tupaia belangeri	36.80	1.00e-16	80.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence