iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gac-042478

Ensembl Protein ID

ENSGACP00000024737.1

UniProt Accession

G3Q4D3; G3Q4D3_GASAC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGACG00000018705.1	ENSGACT00000024786.1	ENSGACP00000024737.1
ENSGACG00000018705.1	ENSGACT00000024793.1	ENSGACP00000024744.1
ENSGACG00000018705.1	ENSGACT00000024797.1	ENSGACP00000024748.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.60e-08	35.0	445	489

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C vC++gge    l++C+ C + +H +Cl+++  +e pn e wiCp+C+
   Q: 445  EFCRVCKDGGE----LLCCDSCPSSYHIHCLNPP-LPEIPNGE-WICPRCT 489
           58*********....*******************.*******8.******6 PP

Organism

Gasterosteus aculeatus

Protein Sequence
(Fasta)

LSPCNADFAD DEDGEVSENE TPKVKKKKKA KKSKESKSSK RRSRREVRRR MLSSLELPVS 60
SPEPMDLVGA EEAEGQRSDS EGSDYTPGRK KKRRGGSGKE KKRSSSGAER SSSRKKEPEP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTCACCGT GTAATGCTGA TTTCGCAGAC GACGAGGATG GGGAGGTCTC GGAGAATGAG 60
ACCCCGAAGG TGAAGAAGAA GAAGAAGGCC AAGAAGAGCA AGGAGAGCAA GAGCAGCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028725--CHD4
IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR009071--HMG_box_dom
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0016581--C:NuRD complex
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0006325--P:chromatin organization
GO:0006355--P:regulation of transcription, DNA-templated
GO:0051225--P:spindle assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001361	Ailuropoda melanoleuca	75.45	0.00e+00	1984.00
IUUC-Apl-004175	Anas platyrhynchos	74.96	0.00e+00	2339.00
IUUC-Aca-004774	Anolis carolinensis	76.80	0.00e+00	2264.00
IUUC-Ame-011098	Astyanax mexicanus	81.72	0.00e+00	2406.00
IUUC-Bta-013220	Bos taurus	75.07	0.00e+00	1967.00
IUUC-Cfa-020422	Canis familiaris	75.70	0.00e+00	1973.00
IUUC-Cpo-021704	Cavia porcellus	75.70	0.00e+00	1970.00
IUUC-Csa-023625	Chlorocebus sabaeus	75.90	0.00e+00	1976.00
IUUC-Cho-024361	Choloepus hoffmanni	82.39	0.00e+00	1321.00
IUUC-Dre-027692	Danio rerio	79.00	0.00e+00	2355.00
IUUC-Dno-029656	Dasypus novemcinctus	75.17	0.00e+00	1973.00
IUUC-Eca-034112	Equus caballus	75.70	0.00e+00	1974.00
IUUC-Fca-036056	Felis catus	75.70	0.00e+00	1972.00
IUUC-Gga-040216	Gallus gallus	74.93	0.00e+00	2407.00
IUUC-Gma-043999	Glycine max	42.29	0.00e+00	717.00
IUUC-Hsa-045908	Homo sapiens	75.98	0.00e+00	1984.00
IUUC-Itr-048002	Ictidomys tridecemlineatus	75.17	0.00e+00	1972.00
IUUC-Loc-052144	Lepisosteus oculatus	86.37	0.00e+00	1960.00
IUUC-Mcc-055773	Macaca mulatta	75.98	0.00e+00	1985.00
IUUC-Mga-059633	Meleagris gallopavo	76.96	0.00e+00	2286.00
IUUC-Mmr-060886	Microcebus murinus	75.78	0.00e+00	1982.00
IUUC-Mdo-062872	Monodelphis domestica	81.43	0.00e+00	1821.00
IUUC-Mmu-063672	Mus musculus	75.37	0.00e+00	1932.00
IUUC-Mpu-066692	Mustela putorius furo	75.70	0.00e+00	1972.00
IUUC-Mlu-067785	Myotis lucifugus	75.70	0.00e+00	1966.00
IUUC-Nle-070039	Nomascus leucogenys	75.66	0.00e+00	1962.00
IUUC-Ont-072418	Oreochromis niloticus	81.48	0.00e+00	2593.00
IUUC-Oan-072885	Ornithorhynchus anatinus	63.23	0.00e+00	1422.00
IUUC-Ocu-074177	Oryctolagus cuniculus	76.94	0.00e+00	1974.00
IUUC-Ola-086880	Oryzias latipes	79.90	0.00e+00	2280.00
IUUC-Oga-088970	Otolemur garnettii	75.78	0.00e+00	1981.00
IUUC-Oar-090422	Ovis aries	75.07	0.00e+00	1967.00
IUUC-Pan-092441	Papio anubis	75.90	0.00e+00	1975.00
IUUC-Psi-093530	Pelodiscus sinensis	81.64	0.00e+00	1896.00
IUUC-Ppa-095213	Physcomitrella patens	40.77	0.00e+00	709.00
IUUC-Pfo-097530	Poecilia formosa	82.74	0.00e+00	2215.00
IUUC-Pab-097959	Pongo abelii	74.19	0.00e+00	1924.00
IUUC-Pva-103186	Pteropus vampyrus	75.99	0.00e+00	1970.00
IUUC-Rno-105692	Rattus norvegicus	74.83	0.00e+00	1935.00
IUUC-Sly-110976	Solanum lycopersicum	42.20	0.00e+00	723.00
IUUC-Ssc-115295	Sus scrofa	75.70	0.00e+00	1972.00
IUUC-Tgu-117484	Taeniopygia guttata	76.57	0.00e+00	2002.00
IUUC-Tru-118745	Takifugu rubripes	78.62	0.00e+00	2623.00
IUUC-Tsy-119261	Tarsius syrichta	76.92	0.00e+00	1429.00
IUUC-Tni-120764	Tetraodon nigroviridis	78.91	0.00e+00	2365.00
IUUC-Ttr-128478	Tursiops truncatus	74.52	0.00e+00	1949.00
IUUC-Vvi-130849	Vitis vinifera	42.25	0.00e+00	719.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence