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Tag Content
UUCD2 ID IUUC-Aml-001428
UUCD1 version UUC-AiM-00910
Ensembl Protein ID ENSAMEP00000018703.1
UniProt Accession G1MH69; G1MH69_AILME
Genbank Protein ID ENSAMEP00000018703
Protein Name Uncharacterized protein
Genbank Nucleotide ID ACTA01010033
Gene Name SNRNP40
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSAMEG00000017689.1 ENSAMET00000019452.1 ENSAMEP00000018703.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.80e-42 140.9 149 183
UBD/Beta-Prp 8.70e-61 205.8 62 265
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gHt+ v+++     +  l+++GsdDgt+k+WD+r+
   Q: 149  GHTSFVNSCYParRGpQLVCTGSDDGTVKLWDIRK 183
           8*******9659955588999***********876 PP
   

   UBD/Beta-Prp
   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsg 135
           lsghe+ev+++kf+p+g++l++++ Dr+i +w++  +++   tlkgh+  v+ l+++ +g+ l s+s d+t+ vwd etg+ ++  l+g
   Q: 62   LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYgDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVK-RLKG 149
           8*******************************8765999*********************************************.**** PP
   S: 136  hdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtd 223
           h+++vn+      g +l+ +Gs+D+tv+lWd++ +  ++t++  +t +v  ++f++++ +++sg+ d+++k+wdl++++  +t++gh d
   Q: 150  HTSFVNSCYPARRGpQLVCTGSDDGTVKLWDIRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 236
           *****************************************7..6******************************************** PP
   S: 224  nvksvrfspnderlvsgssDgsiriWdlr 252
            v+ + +s+++ +l+s ++D+++r+Wd+r
   Q: 237  SVTGLSLSSEGSYLLSNAMDNTVRVWDVR 265
           ***************************98 PP
   
Organism Ailuropoda melanoleuca
Protein Sequence
(Fasta)
MIEQQKRKGP ELPLVPVKRQ RHELLLGAGS GPAAGQQQTA PGALLQAGPP RCSSLQAPIM 60
LLSGHEGEVY CCKFHPNGST LASAGFDRLI LLWNVYGDCD NYATLKGHSG AVMELHYNTD 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Aml-001428|E3,WD_repeat;UBD,Beta-Prp|Ailuropoda melanoleuca
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGATAGAGC AGCAAAAGCG CAAAGGCCCA GAGTTGCCAC TGGTCCCAGT CAAGCGGCAG 60
CGGCATGAGT TGCTGTTGGG GCGGCGGGGT CGGGCCCCGC AGCGGGGCAG CAGCAGACGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Aml-001428|E3,WD_repeat;UBD,Beta-Prp|Ailuropoda melanoleuca
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005829--C:cytosol
GO:0016607--C:nuclear speck
GO:0003723--F:RNA binding
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000138 Aegilops tauschii 57.01 8.00e-115 406.00
IUUC-Atr-003164 Amborella trichopoda 59.14 9.00e-116 409.00
IUUC-Apl-003447 Anas platyrhynchos 97.05 6.00e-153 533.00
IUUC-Aca-004270 Anolis carolinensis 83.72 2.00e-160 558.00
IUUC-Aly-005659 Arabidopsis lyrata 59.75 3.00e-119 421.00
IUUC-Ath-006764 Arabidopsis thaliana 59.12 5.00e-119 420.00
IUUC-Acl-008324 Aspergillus clavatus 47.55 5.00e-91 327.00
IUUC-Afl-008607 Aspergillus flavus 49.47 2.00e-84 305.00
IUUC-Afu-008998 Aspergillus fumigatus 47.24 8.00e-91 327.00
IUUC-Ani-009363 Aspergillus nidulans 46.32 7.00e-90 323.00
IUUC-Ang-009513 Aspergillus niger 45.35 3.00e-80 291.00
IUUC-Aor-010237 Aspergillus oryzae 48.16 9.00e-92 330.00
IUUC-Ate-010374 Aspergillus terreus 43.87 2.00e-78 285.00
IUUC-Ame-010728 Astyanax mexicanus 83.97 1.00e-163 568.00
IUUC-Bgr-012297 Blumeria graminis 45.91 3.00e-65 241.00
IUUC-Bta-012433 Bos taurus 94.74 3.00e-179 620.00
IUUC-Bci-013763 Botrytis cinerea 50.33 6.00e-90 323.00
IUUC-Bdi-014490 Brachypodium distachyon 59.20 3.00e-114 404.00
IUUC-Bol-016479 Brassica oleracea 60.13 8.00e-119 419.00
IUUC-Bra-017219 Brassica rapa 61.90 2.00e-118 418.00
IUUC-Cel-018512 Caenorhabditis elegans 55.99 5.00e-108 384.00
IUUC-Cja-019308 Callithrix jacchus 94.74 5.00e-180 623.00
IUUC-Cfa-020998 Canis familiaris 94.74 0.00e+00 626.00
IUUC-Cpo-021580 Cavia porcellus 97.66 3.00e-179 620.00
IUUC-Cre-022859 Chlamydomonas reinhardtii 53.38 4.00e-102 364.00
IUUC-Csa-023456 Chlorocebus sabaeus 99.12 0.00e+00 630.00
IUUC-Cho-024644 Choloepus hoffmanni 99.66 4.00e-170 590.00
IUUC-Cin-025463 Ciona intestinalis 59.45 8.00e-120 423.00
IUUC-Cgl-026497 Colletotrichum gloeosporioides 45.40 3.00e-89 321.00
IUUC-Cne-026780 Cryptococcus neoformans 42.19 5.00e-63 234.00
IUUC-Dre-027671 Danio rerio 81.34 1.00e-168 585.00
IUUC-Dno-029769 Dasypus novemcinctus 95.32 0.00e+00 629.00
IUUC-Dor-030776 Dipodomys ordii 89.33 9.00e-85 306.00
IUUC-Dse-031316 Dothistroma septosporum 43.61 4.00e-82 298.00
IUUC-Dme-031756 Drosophila melanogaster 60.87 9.00e-118 416.00
IUUC-Ete-032753 Echinops telfairi 86.80 2.00e-155 541.00
IUUC-Eca-033979 Equus caballus 94.74 3.00e-179 620.00
IUUC-Eeu-034862 Erinaceus europaeus 100.00 3.00e-63 235.00
IUUC-Fca-036110 Felis catus 94.16 1.00e-158 551.00
IUUC-Fal-037648 Ficedula albicollis 96.94 2.00e-167 581.00
IUUC-Fox-037861 Fusarium oxysporum 46.08 4.00e-86 311.00
IUUC-Fso-038405 Fusarium solani 46.08 1.00e-85 309.00
IUUC-Gmo-039383 Gadus morhua 83.67 1.00e-164 572.00
IUUC-Ggr-040082 Gaeumannomyces graminis 45.48 1.00e-84 306.00
IUUC-Gga-040785 Gallus gallus 90.69 9.00e-171 592.00
IUUC-Gac-041645 Gasterosteus aculeatus 83.09 2.00e-161 561.00
IUUC-Gma-043672 Glycine max 58.73 5.00e-117 414.00
IUUC-Ggo-044800 Gorilla gorilla 89.44 4.00e-159 553.00
IUUC-Hsa-045918 Homo sapiens 99.12 0.00e+00 630.00
IUUC-Hvu-047342 Hordeum vulgare 57.01 2.00e-114 405.00
IUUC-Itr-048047 Ictidomys tridecemlineatus 91.78 1.00e-111 395.00
IUUC-Kpa-049149 Komagataella pastoris 34.24 3.00e-34 138.00
IUUC-Lch-050395 Latimeria chalumnae 87.43 0.00e+00 626.00
IUUC-Lpe-051275 Leersia perrieri 58.77 1.00e-115 409.00
IUUC-Loc-052666 Lepisosteus oculatus 86.38 3.00e-165 573.00
IUUC-Lma-053129 Leptosphaeria maculans 43.93 1.00e-85 309.00
IUUC-Laf-054512 Loxodonta africana 93.84 7.00e-179 619.00
IUUC-Mcc-055819 Macaca mulatta 99.12 0.00e+00 630.00
IUUC-Meu-056350 Macropus eugenii 80.87 5.00e-150 523.00
IUUC-Mor-057063 Magnaporthe oryzae 45.71 1.00e-86 313.00
IUUC-Mpo-057369 Magnaporthe poae 46.13 3.00e-85 308.00
IUUC-Mtr-058228 Medicago truncatula 59.60 2.00e-116 412.00
IUUC-Mla-059093 Melampsora laricipopulina 40.60 1.00e-65 243.00
IUUC-Mga-059719 Meleagris gallopavo 96.64 6.00e-169 586.00
IUUC-Mvi-060285 Microbotryum violaceum 39.23 7.00e-61 227.00
IUUC-Mmr-061685 Microcebus murinus 88.30 5.00e-161 560.00
IUUC-Mdo-062121 Monodelphis domestica 90.43 1.00e-174 605.00
IUUC-Mmu-063216 Mus musculus 94.74 0.00e+00 630.00
IUUC-Mac-065463 Musa acuminata 54.23 4.00e-105 374.00
IUUC-Mpu-066390 Mustela putorius furo 95.61 0.00e+00 635.00
IUUC-Mlu-066932 Myotis lucifugus 94.15 5.00e-180 623.00
IUUC-Nfi-068509 Neosartorya fischeri 47.24 2.00e-90 325.00
IUUC-Ncr-068870 Neurospora crassa 47.97 2.00e-87 315.00
IUUC-Nle-069539 Nomascus leucogenys 99.12 0.00e+00 630.00
IUUC-Opr-070555 Ochotona princeps 81.87 2.00e-157 548.00
IUUC-Ont-071490 Oreochromis niloticus 84.26 3.00e-165 574.00
IUUC-Oan-073044 Ornithorhynchus anatinus 80.91 2.00e-151 528.00
IUUC-Ocu-073764 Oryctolagus cuniculus 95.91 0.00e+00 636.00
IUUC-Oba-075704 Oryza barthii 58.77 1.00e-115 409.00
IUUC-Obr-076455 Oryza brachyantha 59.09 2.00e-115 408.00
IUUC-Ogl-077382 Oryza glaberrima 59.09 7.00e-116 410.00
IUUC-Ogu-078739 Oryza glumaepatula 58.77 1.00e-115 409.00
IUUC-Oin-079072 Oryza indica 58.77 1.00e-115 409.00
IUUC-Olo-080809 Oryza longistaminata 58.77 1.00e-115 409.00
IUUC-Ome-081677 Oryza meridionalis 58.77 3.00e-115 407.00
IUUC-Oni-082937 Oryza nivara 58.77 1.00e-115 409.00
IUUC-Opu-083510 Oryza punctata 58.77 1.00e-115 409.00
IUUC-Oru-084360 Oryza rufipogon 58.77 2.00e-115 409.00
IUUC-Osa-085640 Oryza sativa 58.77 1.00e-115 409.00
IUUC-Ola-086504 Oryzias latipes 82.80 3.00e-163 567.00
IUUC-Olu-087869 Ostreococcus lucimarinus 42.31 8.00e-60 223.00
IUUC-Oga-088773 Otolemur garnettii 94.74 2.00e-180 624.00
IUUC-Oar-089677 Ovis aries 93.91 2.00e-177 615.00
IUUC-Ptr-090724 Pan troglodytes 98.83 0.00e+00 627.00
IUUC-Pan-092683 Papio anubis 99.12 0.00e+00 630.00
IUUC-Psi-093415 Pelodiscus sinensis 97.94 9.00e-167 578.00
IUUC-Pma-094562 Petromyzon marinus 77.49 2.00e-162 565.00
IUUC-Pno-095014 Phaeosphaeria nodorum 47.24 6.00e-90 324.00
IUUC-Ppa-095728 Physcomitrella patens 57.40 2.00e-116 412.00
IUUC-Pfo-096579 Poecilia formosa 82.22 5.00e-160 556.00
IUUC-Pab-098313 Pongo abelii 99.12 0.00e+00 630.00
IUUC-Pop-099747 Populus trichocarpa 58.86 7.00e-118 416.00
IUUC-Pca-100871 Procavia capensis 84.47 1.00e-120 426.00
IUUC-Ppe-101389 Prunus persica 61.59 1.00e-118 419.00
IUUC-Pva-102468 Pteropus vampyrus 79.82 3.00e-140 491.00
IUUC-Pgr-103523 Puccinia graminis 41.77 1.00e-68 253.00
IUUC-Ptt-103930 Puccinia triticina 41.78 5.00e-68 251.00
IUUC-Pte-104299 Pyrenophora teres 46.93 1.00e-90 326.00
IUUC-Pyt-104564 Pyrenophora triticirepentis 46.93 7.00e-90 323.00
IUUC-Rno-105796 Rattus norvegicus 94.74 7.00e-180 622.00
IUUC-Sha-107191 Sarcophilus harrisii 90.43 1.00e-174 605.00
IUUC-Sja-107952 Schizosaccharomyces japonicus 37.77 2.00e-58 219.00
IUUC-Spo-108249 Schizosaccharomyces pombe 43.19 1.00e-74 273.00
IUUC-Ssl-108448 Sclerotinia sclerotiorum 49.50 7.00e-89 320.00
IUUC-Sit-110805 Setaria italica 57.79 1.00e-114 406.00
IUUC-Sly-111567 Solanum lycopersicum 61.59 1.00e-119 422.00
IUUC-Stu-112562 Solanum tuberosum 61.39 2.00e-120 425.00
IUUC-Sar-112991 Sorex araneus 98.63 2.00e-120 424.00
IUUC-Sbi-114010 Sorghum bicolor 58.28 7.00e-114 403.00
IUUC-Sre-114947 Sporisorium reilianum 42.81 1.00e-69 256.00
IUUC-Ssc-115371 Sus scrofa 94.74 3.00e-179 620.00
IUUC-Tgu-117429 Taeniopygia guttata 94.16 4.00e-165 573.00
IUUC-Tru-118081 Takifugu rubripes 83.14 1.00e-162 565.00
IUUC-Tsy-119101 Tarsius syrichta 82.16 2.00e-149 521.00
IUUC-Tni-120532 Tetraodon nigroviridis 82.80 6.00e-161 560.00
IUUC-Tca-121373 Theobroma cacao 59.62 2.00e-119 422.00
IUUC-Tre-122050 Trichoderma reesei 45.39 5.00e-85 307.00
IUUC-Tvi-122394 Trichoderma virens 43.54 2.00e-84 305.00
IUUC-Tae-124661 Triticum aestivum 57.14 6.00e-114 403.00
IUUC-Tme-126998 Tuber melanosporum 51.02 2.00e-88 319.00
IUUC-Tbe-128032 Tupaia belangeri 94.44 1.00e-180 625.00
IUUC-Ttr-129102 Tursiops truncatus 93.49 1.00e-154 539.00
IUUC-Uma-129363 Ustilago maydis 40.87 3.00e-73 268.00
IUUC-Vda-129891 Verticillium dahliae 47.55 1.00e-88 319.00
IUUC-Vpa-130827 Vicugna pacos 94.15 4.00e-178 617.00
IUUC-Vvi-131202 Vitis vinifera 60.60 7.00e-118 416.00
IUUC-Xtr-132769 Xenopus tropicalis 85.13 2.00e-162 564.00
IUUC-Xma-133147 Xiphophorus maculatus 82.22 1.00e-159 555.00
IUUC-Yli-134352 Yarrowia lipolytica 34.16 1.00e-35 143.00
IUUC-Zma-135294 Zea mays 58.28 1.00e-113 402.00
Created Date 25-Jun-2017

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