iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114099

UUCD1 version

UUC-SoB-00691

Ensembl Protein ID

Sb04g021520.1

UniProt Accession

C5XTD2; C5XTD0; C5XTD2_SORBI

Genbank Protein ID

EES06899.2; EES06900.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763; CM000763

Gene Name

SORBI_004G163500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g021520	Sb04g021520.1	Sb04g021520.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.70e-10	41.4	101	143

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cle++  kd ++vlp CgH+fha C+ +w       +++ +CP+Cr
   Q: 101  CTVCLEEYeaKDVVRVLPaCGHAFHAACIDAW------LRQHPTCPVCR 143
           9*******88888*******************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGDSKGGAGG MGMNMVTTVM AFSVSAFFVL FVFTRLLCAR LHLSRAAADR AAAGDAFAVN 60
VERGIHGLEP SVVTTFPTVK LGDGDGDGGQ QTPPVQEESQ CTVCLEEYEA KDVVRVLPAC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGAGATT CAAAGGGCGG CGCCGGCGGC ATGGGCATGA ACATGGTGAC CACGGTGATG 60
GCCTTCTCGG TCAGCGCCTT CTTCGTGCTC TTCGTCTTCA CCAGGCTGCT CTGCGCGCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_04g021500; sbi:SORBI_04g021520

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000131	Aegilops tauschii	75.79	1.00e-35	142.00
IUUC-Atr-002798	Amborella trichopoda	51.37	1.00e-30	125.00
IUUC-Bdi-014408	Brachypodium distachyon	78.18	1.00e-22	98.20
IUUC-Gma-044096	Glycine max	49.24	3.00e-32	130.00
IUUC-Hvu-047120	Hordeum vulgare	69.54	4.00e-38	150.00
IUUC-Lpe-051633	Leersia perrieri	68.03	7.00e-46	176.00
IUUC-Mtr-058009	Medicago truncatula	45.86	2.00e-30	124.00
IUUC-Mac-065561	Musa acuminata	51.75	8.00e-34	136.00
IUUC-Ogu-078546	Oryza glumaepatula	70.23	4.00e-41	160.00
IUUC-Opu-083702	Oryza punctata	70.59	3.00e-43	167.00
IUUC-Oru-085219	Oryza rufipogon	55.06	9.00e-36	142.00
IUUC-Osa-085731	Oryza sativa	51.11	2.00e-28	118.00
IUUC-Psi-093435	Pelodiscus sinensis	47.46	3.00e-13	67.80
IUUC-Ppa-095233	Physcomitrella patens	41.86	1.00e-15	76.60
IUUC-Pop-099967	Populus trichocarpa	49.24	6.00e-35	139.00
IUUC-Ppe-101855	Prunus persica	49.31	8.00e-35	139.00
IUUC-Sit-110584	Setaria italica	70.44	2.00e-50	191.00
IUUC-Sly-110875	Solanum lycopersicum	49.24	1.00e-32	132.00
IUUC-Stu-112465	Solanum tuberosum	50.76	2.00e-33	134.00
IUUC-Tca-121445	Theobroma cacao	50.00	9.00e-34	135.00
IUUC-Tae-124875	Triticum aestivum	71.03	1.00e-38	152.00
IUUC-Tur-126088	Triticum urartu	79.59	5.00e-19	87.80
IUUC-Vvi-131455	Vitis vinifera	50.42	4.00e-30	123.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence