iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
microRNA	TRANSFAC	RAID2
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-09	37.8	387	420

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtg 33
           H++s+t+l+     +l++++s D ++++W++ ++
   Q: 387  HSASITGLDTciRKPLIATCSLDRSVRIWNYESN 420
           9999***98657558***************8765 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MSTVVAQALH VFGLRPHVTN NVFFFDEQII IFPSGNHCVK YNIDQKWQKF IAGSDKSQGM 60
LALAISPNRR YLAISETVQE KPAVTIYELS SIPCRKRKVL NNFDFQVQKF TSMAFSPDSK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACTGCTCTA GCGTTTGGGC GTGCCCGGAT TGCTTCGGAT CTTTAGGAAG AGCACCTACT 60
GATCCCTACG TAGTCTAGTA ACCCAGAGCC GTGAAGCAAG AGGTAAATAG TTTCTTTGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

mmu:68625

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001714	Ailuropoda melanoleuca	83.85	0.00e+00	1180.00
IUUC-Apl-003618	Anas platyrhynchos	65.91	0.00e+00	1003.00
IUUC-Aca-004758	Anolis carolinensis	72.73	0.00e+00	1751.00
IUUC-Ame-011060	Astyanax mexicanus	55.22	0.00e+00	1328.00
IUUC-Bta-012707	Bos taurus	77.52	0.00e+00	1900.00
IUUC-Cja-019396	Callithrix jacchus	82.61	0.00e+00	1132.00
IUUC-Cfa-020454	Canis familiaris	87.35	0.00e+00	2254.00
IUUC-Cpo-022058	Cavia porcellus	87.14	0.00e+00	2206.00
IUUC-Cre-022624	Chlamydomonas reinhardtii	36.23	3.00e-162	566.00
IUUC-Csa-023207	Chlorocebus sabaeus	87.91	0.00e+00	2236.00
IUUC-Cho-025027	Choloepus hoffmanni	83.42	0.00e+00	1037.00
IUUC-Cin-025464	Ciona intestinalis	58.64	3.00e-81	294.00
IUUC-Csv-025972	Ciona savignyi	54.63	0.00e+00	1273.00
IUUC-Dre-027808	Danio rerio	53.19	0.00e+00	1085.00
IUUC-Dno-028916	Dasypus novemcinctus	85.77	0.00e+00	2152.00
IUUC-Dor-031063	Dipodomys ordii	81.07	0.00e+00	822.00
IUUC-Dme-031680	Drosophila melanogaster	27.72	6.00e-119	422.00
IUUC-Ete-032391	Echinops telfairi	80.71	0.00e+00	996.00
IUUC-Eca-034029	Equus caballus	88.80	0.00e+00	2086.00
IUUC-Fca-035408	Felis catus	87.20	0.00e+00	2179.00
IUUC-Fal-036882	Ficedula albicollis	55.74	0.00e+00	1150.00
IUUC-Gmo-038581	Gadus morhua	53.07	3.00e-160	559.00
IUUC-Gga-041149	Gallus gallus	62.28	0.00e+00	1029.00
IUUC-Gac-042464	Gasterosteus aculeatus	46.76	0.00e+00	1055.00
IUUC-Ggo-045545	Gorilla gorilla	84.94	0.00e+00	1204.00
IUUC-Hsa-045981	Homo sapiens	85.41	0.00e+00	2214.00
IUUC-Itr-048616	Ictidomys tridecemlineatus	84.90	0.00e+00	800.00
IUUC-Loc-052681	Lepisosteus oculatus	67.47	0.00e+00	1711.00
IUUC-Laf-054188	Loxodonta africana	86.31	0.00e+00	2183.00
IUUC-Mcc-055587	Macaca mulatta	86.10	0.00e+00	2219.00
IUUC-Meu-056711	Macropus eugenii	79.53	9.00e-128	450.00
IUUC-Mga-059502	Meleagris gallopavo	59.16	0.00e+00	1274.00
IUUC-Mmr-061637	Microcebus murinus	85.80	0.00e+00	2186.00
IUUC-Mdo-062272	Monodelphis domestica	79.95	0.00e+00	1949.00
IUUC-Mpu-066252	Mustela putorius furo	87.99	0.00e+00	2234.00
IUUC-Mlu-067652	Myotis lucifugus	83.59	0.00e+00	1769.00
IUUC-Nle-069957	Nomascus leucogenys	80.54	0.00e+00	1989.00
IUUC-Opr-070883	Ochotona princeps	81.19	0.00e+00	723.00
IUUC-Ont-072023	Oreochromis niloticus	53.36	0.00e+00	1290.00
IUUC-Oan-073546	Ornithorhynchus anatinus	74.42	0.00e+00	745.00
IUUC-Ocu-073898	Oryctolagus cuniculus	86.64	0.00e+00	2177.00
IUUC-Ola-087473	Oryzias latipes	49.85	0.00e+00	669.00
IUUC-Olu-087727	Ostreococcus lucimarinus	26.09	6.00e-130	459.00
IUUC-Oga-088710	Otolemur garnettii	86.79	0.00e+00	2194.00
IUUC-Oar-089552	Ovis aries	86.32	0.00e+00	2188.00
IUUC-Ptr-090948	Pan troglodytes	85.32	0.00e+00	1099.00
IUUC-Pan-091922	Papio anubis	88.97	0.00e+00	1733.00
IUUC-Psi-093500	Pelodiscus sinensis	76.34	0.00e+00	1503.00
IUUC-Ppa-095316	Physcomitrella patens	28.96	2.00e-85	310.00
IUUC-Pfo-096491	Poecilia formosa	47.58	0.00e+00	680.00
IUUC-Pab-098021	Pongo abelii	85.32	0.00e+00	1097.00
IUUC-Pca-101136	Procavia capensis	88.66	2.00e-50	194.00
IUUC-Pva-102642	Pteropus vampyrus	83.85	0.00e+00	1155.00
IUUC-Sha-106766	Sarcophilus harrisii	76.29	0.00e+00	1809.00
IUUC-Smo-108882	Selaginella moellendorffii	38.30	0.00e+00	767.00
IUUC-Ssc-116324	Sus scrofa	86.40	0.00e+00	2188.00
IUUC-Tgu-117260	Taeniopygia guttata	57.93	0.00e+00	897.00
IUUC-Tru-118464	Takifugu rubripes	51.78	0.00e+00	697.00
IUUC-Tsy-119582	Tarsius syrichta	83.05	0.00e+00	734.00
IUUC-Tni-120901	Tetraodon nigroviridis	51.00	0.00e+00	692.00
IUUC-Tbe-127270	Tupaia belangeri	75.63	0.00e+00	939.00
IUUC-Vpa-130565	Vicugna pacos	81.19	0.00e+00	749.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence