iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014344

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100835337; BRADI_3g52490

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G52490	BRADI3G52490.1	BRADI3G52490.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-24	84.4	273	304
E3 adaptor/Cullin RING/APC_C/CDC20	2.90e-124	414.9	138	447

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDl 30
           gH+ +v++l++  s+  l+sG++D+ +++WD+
   Q: 273  GHSQEVCGLKWsgSGQQLASGGNDNLLHIWDV 304
           8**********976699**************8 PP

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 2    ekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladl.eekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtltg. 94
           e+ ldap+l dd+ylnL+dW+s+nvl++aLg ++ylw+a++g+ s+l  + e++  +tsvsw ++g +la+G +++ ++++D+++++ +rtl+g 
   Q: 138  ERTLDAPDLVDDYYLNLMDWGSSNVLSIALGDTMYLWDASSGSTSELVTVdEDNGPITSVSWAPDGRHLAIGLNSSDIQLWDTSSSRLLRTLKGv 232
           689***********************************************777889************************************664 PP
   S: 95   hsarvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdassse.........Plkkfkehka 180
           h +rvg+L+Wn+++l++G+ dg+i+ +dvr++++ ++t+q+h+qevCGlkw+ ++++LasGGnDn +++wd s  +          l++ ++h+a
   Q: 233  HESRVGSLAWNNNILTTGGMDGRIVNNDVRIRDHAVQTYQGHSQEVCGLKWSGSGQQLASGGNDNLLHIWDVSMASsmpsagrnqWLHRLEDHTA 327
           899********************************************************************98777676666666688999**** PP
   S: 181  avkaiawsPwqkslLasGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslal 275
           avka+aw+P+q++lLa+GGG +Drcikfwnt tga+l+++dtgsqvc llw k+++el+s+hGf++n++tlwkyps+ k+ael+gh++Rvl +a 
   Q: 328  AVKALAWCPFQSNLLATGGGGSDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLFMAQ 422
           *********************************************************************************************** PP
   S: 276  spdgeaivtaagDetlrfwklfdkk 300
           spdg ++++aa+Detlrfw++f + 
   Q: 423  SPDGCTVASAAADETLRFWNVFGTP 447
           **********************865 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MDAGSRSISS EKSRAAVQRP PLQEAGSRPY MPSLSTSSRD PSAKCYGDRF IPNRSAMDMD 60
MAHYLLTEPK KDKENMAASP SKEAYRRLLA EKLLNNRTRI LAFRNKPPEP ENTLAADTVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGCAG GATCCCGCTC GATCTCTTCC GAGAAGAGCC GCGCCGCCGT GCAGCGGCCG 60
CCCCTCCAGG AGGCCGGATC CCGCCCCTAC ATGCCATCGC TGAGCACCTC CTCGCGCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

bdi:100835337

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000638	Aegilops tauschii	94.69	0.00e+00	907.00
IUUC-Aml-001545	Ailuropoda melanoleuca	46.67	6.00e-105	374.00
IUUC-Atr-002628	Amborella trichopoda	68.52	2.00e-173	601.00
IUUC-Apl-003255	Anas platyrhynchos	48.18	8.00e-110	389.00
IUUC-Aca-004920	Anolis carolinensis	48.19	3.00e-102	364.00
IUUC-Bgr-012059	Blumeria graminis	38.94	9.00e-93	333.00
IUUC-Bta-012625	Bos taurus	48.04	7.00e-106	376.00
IUUC-Bol-015368	Brassica oleracea	75.76	0.00e+00	679.00
IUUC-Bra-016738	Brassica rapa	70.11	0.00e+00	667.00
IUUC-Cja-019132	Callithrix jacchus	48.67	6.00e-108	383.00
IUUC-Cfa-020780	Canis familiaris	47.62	9.00e-107	379.00
IUUC-Cpo-022223	Cavia porcellus	48.06	3.00e-96	344.00
IUUC-Cre-022701	Chlamydomonas reinhardtii	51.82	2.00e-116	412.00
IUUC-Csa-023666	Chlorocebus sabaeus	48.43	6.00e-107	380.00
IUUC-Cho-024920	Choloepus hoffmanni	65.77	5.00e-43	167.00
IUUC-Cin-025675	Ciona intestinalis	48.28	5.00e-110	390.00
IUUC-Csv-026019	Ciona savignyi	46.91	5.00e-101	360.00
IUUC-Cne-026872	Cryptococcus neoformans	41.63	2.00e-88	318.00
IUUC-Dre-028026	Danio rerio	44.32	8.00e-103	366.00
IUUC-Dno-028865	Dasypus novemcinctus	46.34	8.00e-104	370.00
IUUC-Dor-030958	Dipodomys ordii	47.33	9.00e-101	359.00
IUUC-Dse-031391	Dothistroma septosporum	48.13	2.00e-95	342.00
IUUC-Dme-031905	Drosophila melanogaster	47.24	6.00e-113	400.00
IUUC-Ete-032387	Echinops telfairi	43.57	3.00e-96	344.00
IUUC-Eeu-035059	Erinaceus europaeus	42.93	1.00e-87	316.00
IUUC-Fca-036346	Felis catus	45.62	7.00e-93	333.00
IUUC-Fal-037558	Ficedula albicollis	47.69	7.00e-108	383.00
IUUC-Gmo-039284	Gadus morhua	43.71	4.00e-100	357.00
IUUC-Gga-040790	Gallus gallus	48.18	1.00e-108	385.00
IUUC-Gac-041431	Gasterosteus aculeatus	43.54	6.00e-94	337.00
IUUC-Gma-043985	Glycine max	72.93	0.00e+00	636.00
IUUC-Ggo-045052	Gorilla gorilla	48.67	4.00e-107	380.00
IUUC-Hsa-046305	Homo sapiens	48.67	4.00e-107	380.00
IUUC-Hvu-047476	Hordeum vulgare	92.78	0.00e+00	900.00
IUUC-Itr-048461	Ictidomys tridecemlineatus	47.95	4.00e-96	344.00
IUUC-Lpe-050954	Leersia perrieri	91.06	0.00e+00	853.00
IUUC-Lma-052998	Leptosphaeria maculans	45.55	5.00e-95	340.00
IUUC-Laf-053742	Loxodonta africana	46.90	2.00e-105	375.00
IUUC-Mcc-054948	Macaca mulatta	48.43	6.00e-107	380.00
IUUC-Mtr-057725	Medicago truncatula	72.73	0.00e+00	636.00
IUUC-Mga-060102	Meleagris gallopavo	48.42	6.00e-109	387.00
IUUC-Mmr-061615	Microcebus murinus	48.43	7.00e-107	380.00
IUUC-Mmu-063864	Mus musculus	46.62	9.00e-100	356.00
IUUC-Mac-064861	Musa acuminata	82.78	0.00e+00	790.00
IUUC-Mpu-066502	Mustela putorius furo	48.18	1.00e-108	385.00
IUUC-Mlu-067277	Myotis lucifugus	47.95	3.00e-104	371.00
IUUC-Nle-070149	Nomascus leucogenys	48.06	4.00e-105	374.00
IUUC-Ont-071660	Oreochromis niloticus	44.34	1.00e-93	336.00
IUUC-Oan-073677	Ornithorhynchus anatinus	52.68	3.00e-97	348.00
IUUC-Ocu-073797	Oryctolagus cuniculus	48.54	2.00e-107	382.00
IUUC-Oba-075514	Oryza barthii	92.13	0.00e+00	871.00
IUUC-Obr-076018	Oryza brachyantha	88.37	0.00e+00	868.00
IUUC-Ogl-077254	Oryza glaberrima	92.34	0.00e+00	873.00
IUUC-Ogu-078562	Oryza glumaepatula	92.13	0.00e+00	872.00
IUUC-Oin-080094	Oryza indica	92.34	0.00e+00	873.00
IUUC-Olo-080449	Oryza longistaminata	93.19	0.00e+00	887.00
IUUC-Ome-081186	Oryza meridionalis	86.38	0.00e+00	850.00
IUUC-Oni-082243	Oryza nivara	92.34	0.00e+00	873.00
IUUC-Opu-084007	Oryza punctata	91.70	0.00e+00	867.00
IUUC-Oru-084357	Oryza rufipogon	92.13	0.00e+00	871.00
IUUC-Osa-086094	Oryza sativa	92.13	0.00e+00	872.00
IUUC-Olu-087647	Ostreococcus lucimarinus	54.40	1.00e-137	482.00
IUUC-Oga-088184	Otolemur garnettii	47.36	7.00e-103	367.00
IUUC-Oar-090023	Ovis aries	47.92	4.00e-103	367.00
IUUC-Ptr-090935	Pan troglodytes	48.66	4.00e-106	377.00
IUUC-Pan-091845	Papio anubis	48.43	6.00e-107	380.00
IUUC-Psi-093188	Pelodiscus sinensis	47.69	6.00e-108	383.00
IUUC-Pma-094187	Petromyzon marinus	45.30	1.00e-97	349.00
IUUC-Pno-094809	Phaeosphaeria nodorum	46.06	1.00e-94	340.00
IUUC-Ppa-095687	Physcomitrella patens	63.93	2.00e-156	544.00
IUUC-Pab-098603	Pongo abelii	48.43	6.00e-107	380.00
IUUC-Pop-098890	Populus trichocarpa	73.60	0.00e+00	656.00
IUUC-Pca-101062	Procavia capensis	47.25	1.00e-107	382.00
IUUC-Ppe-101865	Prunus persica	70.74	0.00e+00	633.00
IUUC-Pva-102925	Pteropus vampyrus	48.91	2.00e-107	382.00
IUUC-Pte-104142	Pyrenophora teres	46.07	2.00e-95	342.00
IUUC-Pyt-104693	Pyrenophora triticirepentis	46.07	2.00e-95	342.00
IUUC-Rno-106005	Rattus norvegicus	46.51	3.00e-100	358.00
IUUC-Sja-107919	Schizosaccharomyces japonicus	44.65	2.00e-92	332.00
IUUC-Spo-108075	Schizosaccharomyces pombe	42.20	4.00e-91	327.00
IUUC-Sit-110732	Setaria italica	89.60	0.00e+00	876.00
IUUC-Sly-111202	Solanum lycopersicum	74.39	0.00e+00	682.00
IUUC-Stu-112024	Solanum tuberosum	74.57	0.00e+00	698.00
IUUC-Sar-113092	Sorex araneus	44.12	7.00e-93	333.00
IUUC-Sbi-114558	Sorghum bicolor	89.83	0.00e+00	875.00
IUUC-Ssc-115710	Sus scrofa	48.28	2.00e-106	379.00
IUUC-Tgu-117100	Taeniopygia guttata	47.93	1.00e-108	385.00
IUUC-Tni-120474	Tetraodon nigroviridis	43.77	2.00e-93	335.00
IUUC-Tca-120949	Theobroma cacao	73.11	0.00e+00	692.00
IUUC-Tae-122784	Triticum aestivum	95.97	0.00e+00	929.00
IUUC-Tur-126193	Triticum urartu	96.11	0.00e+00	909.00
IUUC-Tme-126905	Tuber melanosporum	47.33	2.00e-96	345.00
IUUC-Ttr-128511	Tursiops truncatus	47.38	4.00e-106	377.00
IUUC-Vvi-131245	Vitis vinifera	79.65	0.00e+00	632.00
IUUC-Xtr-131993	Xenopus tropicalis	49.27	2.00e-110	392.00
IUUC-Xma-133332	Xiphophorus maculatus	45.71	5.00e-98	350.00
IUUC-Zma-135456	Zea mays	89.19	0.00e+00	873.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence