iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-086396

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04030204

Gene Name

wdr47a (1 of many); wdr47

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000015669.1	ENSORLT00000019622.1	ENSORLP00000019621.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-25	88.2	756	792
UBD/Beta-Prp	4.60e-40	137.9	660	918

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.fsd.tllvsGsdDgtikvWDlrtgvll 36
           gHt+ + +l  + + ++++sGs D+t++ WD+r   ++
   Q: 756  GHTGHILSLYtW-GgWMIASGSQDKTVRFWDIRVPSCV 792
           8*******9669.44****************9987776 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.....lrslsgheaevtavkfspdgk....ilvtgse.Drtikvwdlstg 84
           ++hhk+ i+cv++sp ++llatgs d+ +kv  ++ +++       ++s h+++++++ f +  +    il++++  D +i+  d   g
   Q: 660  NKHHKGSIYCVAWSPCGQLLATGSNDKYVKVLPFSAETCnatgpDLEFSMHDGTIRDLAFMEGPEsggaILISAGAgDCNIYTTDCHRG 748
           68**********************************999999888899************987667778777765516788888***** PP
   S: 85   kcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgk 170
           + +h+l+gh+  +lsl     g  ++sGs+d+t+r wd++  +c++     + g  + v +v+v+p+g+ll++G  D++++l+d++ g+
   Q: 749  QGLHALSGHTGHILSLYTWG-GWMIASGSQDKTVRFWDIRVPSCVRVvgtAFHGSGSPVASVAVDPSGRLLATGQEDSACMLYDIRGGR 836
           ***************98888.9***********************999999************************************** PP
   S: 171  llrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq....tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
           +++  +  h ++v+s+ f++   +l++gs+d++v++ +lq    ++  +  + +h d v + r +p+d  ++s s+D+++ +W
   Q: 837  IVQVYRP-HSSDVRSVRFSPGAHYLLTGSYDTKVIVTNLQgdltKQLPLTVVGEHGDKVIQCRWHPQDLSFLSSSADRTVTLW 918
           ******9.**********************************955555777777***************************** PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MTAEETINVK EVEIIKVILD FLNSRKLHIS MLALEKESGV INGLYSDDML FLRQLVLDGQ 60
WDEVLQFIQP LECMDTFDRK RFRYIVLKQK FLEALCVNNA MSAEDEPQHM EFTMQEAVKC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACAGCGG AAGAAACCAT AAATGTAAAG GAAGTGGAGA TAATCAAGGT GATCCTGGAC 60
TTCCTAAACT CCAGGAAGCT CCACATCAGC ATGTTAGCTC TGGAAAAGGA GAGCGGGGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001519	Ailuropoda melanoleuca	75.72	0.00e+00	1251.00
IUUC-Apl-003954	Anas platyrhynchos	76.21	0.00e+00	1267.00
IUUC-Aca-004766	Anolis carolinensis	76.70	0.00e+00	1266.00
IUUC-Bta-013072	Bos taurus	75.97	0.00e+00	1249.00
IUUC-Cja-018835	Callithrix jacchus	75.98	0.00e+00	1261.00
IUUC-Cfa-020380	Canis familiaris	71.20	0.00e+00	707.00
IUUC-Cpo-021883	Cavia porcellus	75.64	0.00e+00	1243.00
IUUC-Csa-023467	Chlorocebus sabaeus	76.34	0.00e+00	1264.00
IUUC-Cho-024342	Choloepus hoffmanni	68.68	0.00e+00	1105.00
IUUC-Cin-025112	Ciona intestinalis	45.34	6.00e-75	273.00
IUUC-Dre-027530	Danio rerio	80.73	0.00e+00	1314.00
IUUC-Dno-029290	Dasypus novemcinctus	75.83	0.00e+00	1256.00
IUUC-Dor-030258	Dipodomys ordii	83.38	6.00e-173	601.00
IUUC-Ete-032248	Echinops telfairi	66.91	6.00e-155	541.00
IUUC-Eca-033623	Equus caballus	75.70	0.00e+00	1256.00
IUUC-Fca-036425	Felis catus	73.54	0.00e+00	1073.00
IUUC-Fal-036661	Ficedula albicollis	76.29	0.00e+00	1259.00
IUUC-Gmo-039527	Gadus morhua	81.59	0.00e+00	1379.00
IUUC-Gga-041177	Gallus gallus	76.24	0.00e+00	1262.00
IUUC-Gac-042049	Gasterosteus aculeatus	85.96	0.00e+00	1509.00
IUUC-Ggo-044833	Gorilla gorilla	76.09	0.00e+00	1265.00
IUUC-Hsa-046084	Homo sapiens	75.98	0.00e+00	1260.00
IUUC-Lch-050313	Latimeria chalumnae	71.11	0.00e+00	1227.00
IUUC-Loc-051790	Lepisosteus oculatus	79.48	0.00e+00	1350.00
IUUC-Laf-053521	Loxodonta africana	75.78	0.00e+00	1257.00
IUUC-Mcc-055053	Macaca mulatta	76.45	0.00e+00	1264.00
IUUC-Meu-056734	Macropus eugenii	77.50	3.00e-156	545.00
IUUC-Mga-059381	Meleagris gallopavo	76.43	0.00e+00	1269.00
IUUC-Mmr-060859	Microcebus murinus	75.61	0.00e+00	1246.00
IUUC-Mdo-062501	Monodelphis domestica	75.76	0.00e+00	1181.00
IUUC-Mmu-063126	Mus musculus	76.34	0.00e+00	1252.00
IUUC-Mpu-066718	Mustela putorius furo	73.64	0.00e+00	943.00
IUUC-Mlu-067246	Myotis lucifugus	75.56	0.00e+00	1251.00
IUUC-Nle-069807	Nomascus leucogenys	75.98	0.00e+00	1260.00
IUUC-Opr-070862	Ochotona princeps	89.91	6.00e-57	216.00
IUUC-Ont-072519	Oreochromis niloticus	91.95	0.00e+00	1597.00
IUUC-Oan-072740	Ornithorhynchus anatinus	75.51	0.00e+00	650.00
IUUC-Ocu-074898	Oryctolagus cuniculus	75.81	0.00e+00	1240.00
IUUC-Oga-088563	Otolemur garnettii	75.64	0.00e+00	1254.00
IUUC-Oar-089926	Ovis aries	76.39	0.00e+00	1254.00
IUUC-Ptr-090706	Pan troglodytes	75.88	0.00e+00	1257.00
IUUC-Pan-091740	Papio anubis	76.45	0.00e+00	1264.00
IUUC-Psi-093938	Pelodiscus sinensis	75.05	0.00e+00	1251.00
IUUC-Pfo-096531	Poecilia formosa	90.47	0.00e+00	1575.00
IUUC-Pab-098312	Pongo abelii	76.45	0.00e+00	1265.00
IUUC-Pca-101100	Procavia capensis	84.03	4.00e-169	588.00
IUUC-Pva-102734	Pteropus vampyrus	70.96	2.00e-156	546.00
IUUC-Rno-105625	Rattus norvegicus	76.05	0.00e+00	1243.00
IUUC-Sha-106999	Sarcophilus harrisii	74.25	0.00e+00	1207.00
IUUC-Sar-112988	Sorex araneus	64.66	0.00e+00	866.00
IUUC-Ssc-115384	Sus scrofa	75.75	0.00e+00	1244.00
IUUC-Tgu-116808	Taeniopygia guttata	75.53	0.00e+00	1254.00
IUUC-Tru-118233	Takifugu rubripes	87.76	0.00e+00	1505.00
IUUC-Tsy-119509	Tarsius syrichta	83.25	3.00e-168	585.00
IUUC-Tni-120473	Tetraodon nigroviridis	87.20	0.00e+00	1565.00
IUUC-Tbe-127447	Tupaia belangeri	74.16	4.00e-119	422.00
IUUC-Ttr-128459	Tursiops truncatus	74.03	0.00e+00	1175.00
IUUC-Vpa-130258	Vicugna pacos	66.97	0.00e+00	689.00
IUUC-Xtr-132609	Xenopus tropicalis	72.33	0.00e+00	1195.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence