iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099039

Ensembl Protein ID

POPTR_0019s01490.1

UniProt Accession

U5FF12; U5FF12_POPTR

Genbank Protein ID

ERP48689.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000355

Gene Name

POPTRDRAFT_783647; POPTR_0019s01490g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0019s01490	POPTR_0019s01490.1	POPTR_0019s01490.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-17	62.6	27	54

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf..sdtllvsGsdDgtikvWDlrt 32
            c+af   +tll++G+ Dg++ +WD+ t
   Q: 27   KCIAFnrRGTLLAAGCADGSCVIWDFET 54
           69***9766****************866 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MNAPIIDPLQ GDFPEVIEEY LHHGVTKCIA FNRRGTLLAA GCADGSCVIW DFETRGVAKE 60
LRDKDCIAAI TSICWSKYGH RILVSSADKS LILWDVVSGE KITRITLHHT PLLARLHPGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAACATAAAA TACCCGAAAA TAATTTAACT TTCCCTCACT CTCGGAATCG TAACAGAACT 60
CGACTTCCCT TCCCTGTCTT CCCCACGACA AAACTCCTCC TACGCCGCGC CGCCACGACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0019s01490g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002118	Ailuropoda melanoleuca	38.15	3.00e-58	219.00
IUUC-Atr-002777	Amborella trichopoda	71.15	0.00e+00	694.00
IUUC-Apl-004056	Anas platyrhynchos	37.92	6.00e-58	218.00
IUUC-Aca-004999	Anolis carolinensis	37.70	2.00e-57	216.00
IUUC-Aly-006092	Arabidopsis lyrata	71.35	0.00e+00	732.00
IUUC-Ath-006947	Arabidopsis thaliana	73.22	0.00e+00	734.00
IUUC-Ago-007753	Ashbya gossypii	30.10	1.00e-33	136.00
IUUC-Acl-008105	Aspergillus clavatus	33.18	9.00e-48	184.00
IUUC-Afl-008633	Aspergillus flavus	33.56	5.00e-47	181.00
IUUC-Afu-009075	Aspergillus fumigatus	32.62	2.00e-26	112.00
IUUC-Ani-009233	Aspergillus nidulans	34.62	2.00e-51	196.00
IUUC-Ang-009695	Aspergillus niger	35.09	2.00e-49	189.00
IUUC-Aor-009988	Aspergillus oryzae	33.56	5.00e-47	181.00
IUUC-Ate-010313	Aspergillus terreus	34.00	9.00e-47	180.00
IUUC-Ame-011134	Astyanax mexicanus	34.46	3.00e-47	182.00
IUUC-Bgr-012302	Blumeria graminis	33.91	1.00e-44	173.00
IUUC-Bta-012946	Bos taurus	37.12	2.00e-59	223.00
IUUC-Bci-013968	Botrytis cinerea	33.81	9.00e-49	187.00
IUUC-Bdi-014387	Brachypodium distachyon	64.09	5.00e-177	613.00
IUUC-Cel-018610	Caenorhabditis elegans	31.66	9.00e-48	183.00
IUUC-Cja-019938	Callithrix jacchus	38.15	6.00e-58	218.00
IUUC-Cfa-020726	Canis familiaris	37.12	4.00e-59	221.00
IUUC-Cre-022588	Chlamydomonas reinhardtii	54.87	1.00e-29	123.00
IUUC-Csa-024192	Chlorocebus sabaeus	37.12	2.00e-59	223.00
IUUC-Cho-024355	Choloepus hoffmanni	37.04	4.00e-59	221.00
IUUC-Dre-027374	Danio rerio	36.40	3.00e-57	215.00
IUUC-Dno-030003	Dasypus novemcinctus	37.70	4.00e-55	208.00
IUUC-Dor-030355	Dipodomys ordii	37.12	3.00e-59	222.00
IUUC-Dse-031442	Dothistroma septosporum	33.66	7.00e-48	184.00
IUUC-Ete-032858	Echinops telfairi	34.98	2.00e-38	153.00
IUUC-Eca-034217	Equus caballus	37.12	2.00e-59	223.00
IUUC-Fca-035370	Felis catus	38.15	3.00e-58	218.00
IUUC-Fal-036628	Ficedula albicollis	37.84	3.00e-57	215.00
IUUC-Fox-037739	Fusarium oxysporum	29.12	4.00e-48	184.00
IUUC-Fso-038094	Fusarium solani	31.96	5.00e-46	177.00
IUUC-Ggr-040063	Gaeumannomyces graminis	29.74	6.00e-45	174.00
IUUC-Gga-041160	Gallus gallus	36.91	3.00e-59	222.00
IUUC-Gac-041333	Gasterosteus aculeatus	34.72	2.00e-57	216.00
IUUC-Gma-043909	Glycine max	80.27	0.00e+00	774.00
IUUC-Ggo-044657	Gorilla gorilla	37.12	2.00e-59	223.00
IUUC-Hsa-045894	Homo sapiens	37.12	2.00e-59	223.00
IUUC-Hvu-047662	Hordeum vulgare	62.43	0.00e+00	638.00
IUUC-Itr-048125	Ictidomys tridecemlineatus	37.07	3.00e-58	218.00
IUUC-Kpa-049095	Komagataella pastoris	30.02	1.00e-33	136.00
IUUC-Lch-049495	Latimeria chalumnae	34.25	2.00e-28	119.00
IUUC-Lpe-051038	Leersia perrieri	63.27	4.00e-177	613.00
IUUC-Loc-052680	Lepisosteus oculatus	35.69	8.00e-61	227.00
IUUC-Laf-053717	Loxodonta africana	38.15	3.00e-58	219.00
IUUC-Mcc-055007	Macaca mulatta	38.60	3.00e-58	218.00
IUUC-Meu-056494	Macropus eugenii	48.47	2.00e-19	90.10
IUUC-Mpo-057622	Magnaporthe poae	29.74	3.00e-45	175.00
IUUC-Mtr-057672	Medicago truncatula	73.04	0.00e+00	783.00
IUUC-Mga-060037	Meleagris gallopavo	37.75	1.00e-56	213.00
IUUC-Mmr-060755	Microcebus murinus	38.15	2.00e-58	219.00
IUUC-Mdo-061859	Monodelphis domestica	36.91	5.00e-59	221.00
IUUC-Mmu-063755	Mus musculus	37.12	2.00e-59	223.00
IUUC-Mpu-065896	Mustela putorius furo	37.12	2.00e-59	222.00
IUUC-Mlu-067927	Myotis lucifugus	38.15	3.00e-58	219.00
IUUC-Nfi-068429	Neosartorya fischeri	31.42	3.00e-48	185.00
IUUC-Ncr-068738	Neurospora crassa	33.09	3.00e-46	178.00
IUUC-Nle-069608	Nomascus leucogenys	37.12	2.00e-59	223.00
IUUC-Opr-070319	Ochotona princeps	37.92	4.00e-57	215.00
IUUC-Ont-071451	Oreochromis niloticus	35.31	1.00e-59	223.00
IUUC-Oan-073445	Ornithorhynchus anatinus	37.58	3.00e-56	212.00
IUUC-Ocu-074341	Oryctolagus cuniculus	37.12	2.00e-59	222.00
IUUC-Oba-075664	Oryza barthii	62.66	0.00e+00	639.00
IUUC-Obr-076630	Oryza brachyantha	60.99	0.00e+00	627.00
IUUC-Ogl-077847	Oryza glaberrima	62.92	0.00e+00	638.00
IUUC-Ogu-077970	Oryza glumaepatula	62.33	2.00e-171	595.00
IUUC-Oin-079374	Oryza indica	62.66	0.00e+00	638.00
IUUC-Olo-080992	Oryza longistaminata	63.16	0.00e+00	638.00
IUUC-Ome-081683	Oryza meridionalis	63.58	2.00e-178	618.00
IUUC-Oni-082594	Oryza nivara	62.66	0.00e+00	638.00
IUUC-Opu-083907	Oryza punctata	64.34	0.00e+00	646.00
IUUC-Oru-084400	Oryza rufipogon	62.66	0.00e+00	639.00
IUUC-Osa-085442	Oryza sativa	62.66	0.00e+00	639.00
IUUC-Ola-086569	Oryzias latipes	35.31	6.00e-59	221.00
IUUC-Oga-088947	Otolemur garnettii	36.85	7.00e-54	204.00
IUUC-Oar-090358	Ovis aries	37.92	6.00e-58	218.00
IUUC-Ptr-091601	Pan troglodytes	37.12	2.00e-59	223.00
IUUC-Pan-092466	Papio anubis	37.12	2.00e-59	223.00
IUUC-Psi-093614	Pelodiscus sinensis	35.07	3.00e-58	218.00
IUUC-Pno-094819	Phaeosphaeria nodorum	30.87	5.00e-41	161.00
IUUC-Pfo-096312	Poecilia formosa	36.83	9.00e-59	220.00
IUUC-Pab-098058	Pongo abelii	37.12	2.00e-59	223.00
IUUC-Pva-102779	Pteropus vampyrus	35.90	3.00e-55	209.00
IUUC-Pgr-103398	Puccinia graminis	33.08	8.00e-43	167.00
IUUC-Ptt-103912	Puccinia triticina	31.82	5.00e-43	168.00
IUUC-Pte-104246	Pyrenophora teres	33.02	5.00e-43	168.00
IUUC-Pyt-104582	Pyrenophora triticirepentis	32.79	7.00e-43	167.00
IUUC-Rno-104838	Rattus norvegicus	37.12	2.00e-59	223.00
IUUC-Sce-106229	Saccharomyces cerevisiae	29.85	4.00e-32	131.00
IUUC-Sha-106527	Sarcophilus harrisii	36.91	5.00e-59	221.00
IUUC-Smo-109474	Selaginella moellendorffii	50.29	4.00e-122	431.00
IUUC-Sit-110687	Setaria italica	62.75	2.00e-177	615.00
IUUC-Sly-111597	Solanum lycopersicum	74.57	0.00e+00	750.00
IUUC-Stu-112389	Solanum tuberosum	74.76	0.00e+00	758.00
IUUC-Sbi-114362	Sorghum bicolor	60.85	1.00e-173	602.00
IUUC-Ssc-115604	Sus scrofa	38.15	4.00e-58	218.00
IUUC-Tru-118258	Takifugu rubripes	36.83	2.00e-58	219.00
IUUC-Tsy-119169	Tarsius syrichta	35.61	9.00e-48	184.00
IUUC-Tni-119668	Tetraodon nigroviridis	36.83	3.00e-57	215.00
IUUC-Tca-121010	Theobroma cacao	82.55	0.00e+00	893.00
IUUC-Tre-121944	Trichoderma reesei	33.01	2.00e-45	176.00
IUUC-Tvi-122283	Trichoderma virens	32.93	2.00e-45	176.00
IUUC-Tme-127150	Tuber melanosporum	33.87	1.00e-50	193.00
IUUC-Uma-129654	Ustilago maydis	28.88	2.00e-33	136.00
IUUC-Vda-129788	Verticillium dahliae	32.87	4.00e-48	185.00
IUUC-Vpa-130182	Vicugna pacos	36.53	3.00e-44	172.00
IUUC-Vvi-131557	Vitis vinifera	80.98	0.00e+00	880.00
IUUC-Xtr-132007	Xenopus tropicalis	37.04	6.00e-60	224.00
IUUC-Xma-133909	Xiphophorus maculatus	36.83	1.00e-58	220.00
IUUC-Yli-134524	Yarrowia lipolytica	32.30	3.00e-45	175.00
IUUC-Zma-134821	Zea mays	61.03	8.00e-178	616.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence