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Tag Content
UUCD2 ID IUUC-Dre-028416
UUCD1 version UUC-DaR-00682
Ensembl Protein ID ENSDARP00000120100.1
UniProt Accession F1QD74; F1QD74_DANRE
Genbank Protein ID ENSDARP00000068403
Protein Name V(D)J recombination-activating protein 1
Genbank Nucleotide ID AL935203
Gene Name rag1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSDARG00000052122.4 ENSDART00000142917.2 ENSDARP00000120100.1
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 59.04 0.00e+00 1210.00 IUUC-Hsa-045964
E3 activity/RING/RING 58.81 0.00e+00 1209.00 IUUC-Mmu-064297
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Danio rerio
Protein Sequence
(Fasta)
MEKGRWSSED APRASMPDEL SHPKFSEWKF KLFRVRSMEK APVQNETPVE KENQPELAME 60
KTSSQGSVMR LCFGGKSKEN VESARGRVDL KLQEIDTHMN LLKNMCRLCG IAIQKAKGPS 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Dre-028416|E3,RING|Danio rerio
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGAGCACCAA GCAACTGAGA TCCAGCCAGG CACTCTTAGA TAGAGGGCCT GAAAGACATC 60
CACACTCAAA AACGCACTAG GCCTCCCTTG TGCCCCCATG CGGAAAGGCC CCAGGGGAGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Dre-028416|E3,RING|Danio rerio
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0233--DNA recombination
KW-0238--DNA-binding
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR024627--RAG1
IPR019485--RAG1_Znf
IPR023336--RAG_nonamer-bd_dom
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS51487--NBD
PS51765--ZF_RAG1
PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF12940--RAG1
PF00097--zf-C3HC4
SMART

SM00184--RING
Gene Ontology

GO:0005634--C:nucleus
GO:0004519--F:endonuclease activity
GO:0043565--F:sequence-specific DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0033151--P:V(D)J recombination
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001206 Ailuropoda melanoleuca 58.66 0.00e+00 1206.00
IUUC-Apl-003271 Anas platyrhynchos 59.32 0.00e+00 1251.00
IUUC-Aca-004400 Anolis carolinensis 58.09 0.00e+00 1225.00
IUUC-Ame-011295 Astyanax mexicanus 81.00 0.00e+00 1743.00
IUUC-Bta-012421 Bos taurus 59.64 0.00e+00 1243.00
IUUC-Cja-019891 Callithrix jacchus 57.83 0.00e+00 1192.00
IUUC-Cfa-020740 Canis familiaris 58.57 0.00e+00 1199.00
IUUC-Cpo-021800 Cavia porcellus 58.85 0.00e+00 1192.00
IUUC-Csa-024203 Chlorocebus sabaeus 57.22 0.00e+00 1041.00
IUUC-Dno-029101 Dasypus novemcinctus 58.43 0.00e+00 1184.00
IUUC-Eca-033385 Equus caballus 59.13 0.00e+00 1214.00
IUUC-Fca-036545 Felis catus 58.61 0.00e+00 1211.00
IUUC-Fal-037208 Ficedula albicollis 58.25 0.00e+00 1229.00
IUUC-Gmo-039622 Gadus morhua 67.25 0.00e+00 1439.00
IUUC-Gga-041182 Gallus gallus 59.92 0.00e+00 1223.00
IUUC-Gac-041682 Gasterosteus aculeatus 72.38 0.00e+00 1563.00
IUUC-Ggo-044510 Gorilla gorilla 58.52 0.00e+00 1201.00
IUUC-Hsa-045964 Homo sapiens 59.04 0.00e+00 1208.00
IUUC-Itr-048862 Ictidomys tridecemlineatus 57.74 0.00e+00 1197.00
IUUC-Lch-050041 Latimeria chalumnae 61.46 0.00e+00 1252.00
IUUC-Loc-052464 Lepisosteus oculatus 71.10 0.00e+00 1519.00
IUUC-Laf-053544 Loxodonta africana 56.60 0.00e+00 1187.00
IUUC-Mcc-054867 Macaca mulatta 58.55 0.00e+00 1197.00
IUUC-Meu-055986 Macropus eugenii 56.25 0.00e+00 1075.00
IUUC-Mga-059262 Meleagris gallopavo 59.87 0.00e+00 1225.00
IUUC-Mdo-062686 Monodelphis domestica 57.90 0.00e+00 1222.00
IUUC-Mmu-064297 Mus musculus 58.81 0.00e+00 1234.00
IUUC-Mpu-066027 Mustela putorius furo 58.88 0.00e+00 1190.00
IUUC-Mlu-067885 Myotis lucifugus 58.38 0.00e+00 1217.00
IUUC-Nle-070073 Nomascus leucogenys 58.39 0.00e+00 1204.00
IUUC-Ont-071400 Oreochromis niloticus 74.36 0.00e+00 1619.00
IUUC-Oan-072920 Ornithorhynchus anatinus 77.41 0.00e+00 648.00
IUUC-Ocu-074616 Oryctolagus cuniculus 59.04 0.00e+00 1196.00
IUUC-Ola-086828 Oryzias latipes 73.06 0.00e+00 1575.00
IUUC-Oga-088675 Otolemur garnettii 71.53 2.00e-114 404.00
IUUC-Oar-090380 Ovis aries 58.87 0.00e+00 1249.00
IUUC-Ptr-090648 Pan troglodytes 58.76 0.00e+00 1206.00
IUUC-Pan-092036 Papio anubis 58.65 0.00e+00 1197.00
IUUC-Psi-093130 Pelodiscus sinensis 59.15 0.00e+00 1258.00
IUUC-Pfo-097273 Poecilia formosa 73.16 0.00e+00 1583.00
IUUC-Pca-100134 Procavia capensis 69.35 0.00e+00 1056.00
IUUC-Rno-105632 Rattus norvegicus 58.96 0.00e+00 1241.00
IUUC-Sha-107238 Sarcophilus harrisii 58.29 0.00e+00 1237.00
IUUC-Sar-113591 Sorex araneus 73.70 3.00e-170 592.00
IUUC-Ssc-115720 Sus scrofa 58.04 0.00e+00 1201.00
IUUC-Tgu-117030 Taeniopygia guttata 58.62 0.00e+00 1245.00
IUUC-Tru-117669 Takifugu rubripes 71.27 0.00e+00 1454.00
IUUC-Tsy-119578 Tarsius syrichta 58.04 0.00e+00 1192.00
IUUC-Tni-120073 Tetraodon nigroviridis 71.31 0.00e+00 1522.00
IUUC-Tbe-128029 Tupaia belangeri 46.26 7.00e-138 485.00
IUUC-Ttr-128677 Tursiops truncatus 70.80 3.00e-175 609.00
IUUC-Vpa-130346 Vicugna pacos 74.94 0.00e+00 695.00
IUUC-Xtr-132442 Xenopus tropicalis 73.98 1.00e-85 308.00
Created Date 25-Jun-2017

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