iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-001656

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01001024

Gene Name

PHF21A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000000598.1	ENSAMET00000000651.1	ENSAMEP00000000630.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.50e-10	40.5	437	482

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC+++g+    l++C+ C++++H +Cl ++  ++ p+   wiCp+C++
   Q: 437  DFCSVCRKSGQ----LLMCDTCSRVYHLDCLDPP-LKTIPKGM-WICPRCQD 482
           79*********....*******************.*******7.******85 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

KRVVEQLRKN LIVKQEQPDK FQIQPLPQSE NKLQTAQQQP LQQLQQQQQY HHHHAQSAAP 60
SPNLTASQKT VTTASMITTK TLPLVLKAAT ATMPASVVGQ RPTIAMVTAI NSQKAVLSTD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAGAGTAG TTGAACAGCT ACGGAAGAAC CTGATAGTAA AGCAAGAACA ACCAGACAAG 60
TTCCAAATAC AGCCATTGCC ACAATCTGAA AACAAACTAC AAACAGCACA GCAGCAACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:1990391--C:DNA repair complex
GO:0000118--C:histone deacetylase complex
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002930	Amborella trichopoda	46.43	8.00e-10	59.70
IUUC-Apl-003874	Anas platyrhynchos	88.29	0.00e+00	965.00
IUUC-Aca-004684	Anolis carolinensis	86.84	0.00e+00	709.00
IUUC-Ame-010638	Astyanax mexicanus	65.82	3.00e-128	452.00
IUUC-Bgr-012025	Blumeria graminis	38.89	8.00e-09	56.60
IUUC-Bta-013460	Bos taurus	97.32	0.00e+00	1013.00
IUUC-Cja-019170	Callithrix jacchus	96.18	0.00e+00	1035.00
IUUC-Cfa-020760	Canis familiaris	99.68	0.00e+00	1062.00
IUUC-Cpo-021549	Cavia porcellus	93.98	0.00e+00	1001.00
IUUC-Csa-023461	Chlorocebus sabaeus	96.51	0.00e+00	911.00
IUUC-Cne-026966	Cryptococcus neoformans	44.64	5.00e-11	62.40
IUUC-Dre-027928	Danio rerio	53.12	3.00e-129	455.00
IUUC-Dno-029450	Dasypus novemcinctus	98.44	0.00e+00	876.00
IUUC-Dor-030699	Dipodomys ordii	95.23	0.00e+00	1040.00
IUUC-Ete-033073	Echinops telfairi	80.60	0.00e+00	770.00
IUUC-Eca-033822	Equus caballus	94.44	0.00e+00	1022.00
IUUC-Fca-035562	Felis catus	99.36	0.00e+00	1054.00
IUUC-Fal-037269	Ficedula albicollis	87.82	0.00e+00	959.00
IUUC-Gmo-038592	Gadus morhua	57.20	2.00e-123	436.00
IUUC-Gga-040795	Gallus gallus	88.13	0.00e+00	963.00
IUUC-Gac-042224	Gasterosteus aculeatus	59.04	4.00e-150	525.00
IUUC-Ggo-045327	Gorilla gorilla	96.51	0.00e+00	1037.00
IUUC-Hsa-046675	Homo sapiens	96.66	0.00e+00	1042.00
IUUC-Itr-048946	Ictidomys tridecemlineatus	96.06	0.00e+00	665.00
IUUC-Lch-050609	Latimeria chalumnae	71.34	0.00e+00	686.00
IUUC-Loc-052407	Lepisosteus oculatus	67.82	0.00e+00	674.00
IUUC-Laf-053876	Loxodonta africana	96.19	0.00e+00	1028.00
IUUC-Mcc-054954	Macaca mulatta	93.68	0.00e+00	989.00
IUUC-Meu-056821	Macropus eugenii	84.54	0.00e+00	929.00
IUUC-Mtr-058324	Medicago truncatula	40.58	2.00e-10	61.20
IUUC-Mga-059320	Meleagris gallopavo	88.27	0.00e+00	967.00
IUUC-Mmr-061278	Microcebus murinus	91.47	0.00e+00	982.00
IUUC-Mdo-062891	Monodelphis domestica	88.26	0.00e+00	994.00
IUUC-Mmu-063907	Mus musculus	91.38	0.00e+00	978.00
IUUC-Mac-065599	Musa acuminata	39.44	4.00e-11	63.50
IUUC-Mpu-065839	Mustela putorius furo	98.89	0.00e+00	1042.00
IUUC-Mlu-068142	Myotis lucifugus	98.41	0.00e+00	1041.00
IUUC-Nle-069423	Nomascus leucogenys	96.19	0.00e+00	1033.00
IUUC-Opr-070236	Ochotona princeps	87.34	0.00e+00	829.00
IUUC-Ont-071327	Oreochromis niloticus	52.95	5.00e-128	451.00
IUUC-Oan-073405	Ornithorhynchus anatinus	97.14	0.00e+00	932.00
IUUC-Ocu-074391	Oryctolagus cuniculus	94.61	0.00e+00	1010.00
IUUC-Ola-086548	Oryzias latipes	56.30	7.00e-150	524.00
IUUC-Oga-088488	Otolemur garnettii	97.94	0.00e+00	1040.00
IUUC-Oar-090334	Ovis aries	98.49	0.00e+00	1016.00
IUUC-Ptr-091018	Pan troglodytes	96.66	0.00e+00	1042.00
IUUC-Psi-093596	Pelodiscus sinensis	89.64	0.00e+00	873.00
IUUC-Pma-094616	Petromyzon marinus	64.03	1.00e-99	355.00
IUUC-Pfo-097233	Poecilia formosa	52.98	3.00e-131	461.00
IUUC-Pab-097801	Pongo abelii	96.35	0.00e+00	1037.00
IUUC-Pop-099691	Populus trichocarpa	44.29	1.00e-11	65.50
IUUC-Ppe-101956	Prunus persica	47.83	3.00e-13	70.50
IUUC-Pva-102419	Pteropus vampyrus	98.57	0.00e+00	1049.00
IUUC-Pyt-104775	Pyrenophora triticirepentis	32.50	3.00e-12	67.80
IUUC-Rno-104900	Rattus norvegicus	92.09	0.00e+00	1009.00
IUUC-Sha-107328	Sarcophilus harrisii	92.86	0.00e+00	983.00
IUUC-Sar-113573	Sorex araneus	99.52	0.00e+00	759.00
IUUC-Ssc-115924	Sus scrofa	99.05	0.00e+00	959.00
IUUC-Tgu-117422	Taeniopygia guttata	88.27	0.00e+00	968.00
IUUC-Tru-118697	Takifugu rubripes	75.46	5.00e-103	368.00
IUUC-Tsy-119092	Tarsius syrichta	97.42	8.00e-176	610.00
IUUC-Tni-120185	Tetraodon nigroviridis	61.95	5.00e-130	458.00
IUUC-Tca-121730	Theobroma cacao	43.48	9.00e-11	62.40
IUUC-Ttr-128860	Tursiops truncatus	95.26	0.00e+00	1031.00
IUUC-Vpa-130333	Vicugna pacos	92.63	0.00e+00	982.00
IUUC-Xtr-131763	Xenopus tropicalis	74.57	0.00e+00	721.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence