iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095414

Ensembl Protein ID

PP1S114_132V6.1

UniProt Accession

A9SST7; A9SST7_PHYPA

Genbank Protein ID

EDQ65810.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545003

Gene Name

PHYPADRAFT_188047

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S114_132V6	PP1S114_132V6.1	PP1S114_132V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-11	44.3	186	217

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDl 30
           H+ +vt l+f    d++l+sG   g++ +WD+
   Q: 186  HSRRVTYLEFhptKDNILISGDKRGQVGIWDF 217
           999********7544****************5 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MRAAMRKRMV VVQRESDAEE SSEEEEEEEE EEEEFVDSDY EESKDVEDEE AEGDEGENAG 60
GEEHEEEENE EEEKKQKKRK ARITISLKGQ KVCKVCKAKD HQAGFVGSVY LDCPNKPCYL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGGTGAT TCTATCACAT TCCCGCACCA GATTTTTCTC CCTTTTGTTT CTTTGGGTTG 60
CGGCGGGCAT GGACTTTGCT CATAACGGCC GTGATTGTCG GCAACTTGAG GCTGCCGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001878--Znf_CCHC

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006281--P:DNA repair

KEGG

ppp:PHYPADRAFT_188047

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	58.49	5.00e-161	560.00
IUUC-Aml-002203	Ailuropoda melanoleuca	27.71	1.00e-26	113.00
IUUC-Atr-002957	Amborella trichopoda	59.40	3.00e-176	610.00
IUUC-Apl-003832	Anas platyrhynchos	31.69	5.00e-37	147.00
IUUC-Aca-004358	Anolis carolinensis	32.24	7.00e-35	140.00
IUUC-Aly-006296	Arabidopsis lyrata	58.58	3.00e-165	574.00
IUUC-Ath-007115	Arabidopsis thaliana	57.88	3.00e-164	571.00
IUUC-Acl-008370	Aspergillus clavatus	24.20	3.00e-17	82.40
IUUC-Afl-008586	Aspergillus flavus	23.50	9.00e-13	67.80
IUUC-Afu-008907	Aspergillus fumigatus	21.98	9.00e-14	70.90
IUUC-Ani-009415	Aspergillus nidulans	20.45	1.00e-09	57.40
IUUC-Aor-010197	Aspergillus oryzae	23.25	2.00e-12	67.00
IUUC-Ate-010280	Aspergillus terreus	22.19	6.00e-12	64.70
IUUC-Ame-010817	Astyanax mexicanus	29.08	3.00e-33	135.00
IUUC-Bgr-012236	Blumeria graminis	24.25	3.00e-11	62.40
IUUC-Bta-012914	Bos taurus	28.74	3.00e-30	125.00
IUUC-Bci-013796	Botrytis cinerea	23.06	5.00e-12	65.10
IUUC-Bdi-014261	Brachypodium distachyon	56.87	1.00e-166	578.00
IUUC-Bol-015317	Brassica oleracea	59.91	1.00e-162	565.00
IUUC-Bra-016848	Brassica rapa	60.14	8.00e-163	566.00
IUUC-Cja-018967	Callithrix jacchus	26.67	3.00e-26	112.00
IUUC-Cfa-021238	Canis familiaris	28.40	4.00e-26	111.00
IUUC-Cpo-022063	Cavia porcellus	28.09	2.00e-26	112.00
IUUC-Cre-022967	Chlamydomonas reinhardtii	20.06	2.00e-08	53.50
IUUC-Csa-023382	Chlorocebus sabaeus	26.67	4.00e-26	111.00
IUUC-Cho-024931	Choloepus hoffmanni	27.17	3.00e-13	69.70
IUUC-Cin-025651	Ciona intestinalis	27.38	1.00e-25	110.00
IUUC-Cgl-026604	Colletotrichum gloeosporioides	24.02	2.00e-17	83.20
IUUC-Cne-027093	Cryptococcus neoformans	25.12	9.00e-08	51.20
IUUC-Cme-027238	Cyanidioschyzon merolae	23.69	4.00e-07	48.90
IUUC-Dre-028732	Danio rerio	30.29	9.00e-30	124.00
IUUC-Dno-029575	Dasypus novemcinctus	26.93	1.00e-24	107.00
IUUC-Dor-030554	Dipodomys ordii	26.75	4.00e-24	105.00
IUUC-Dse-031299	Dothistroma septosporum	22.78	6.00e-18	85.10
IUUC-Ete-033038	Echinops telfairi	26.90	3.00e-28	119.00
IUUC-Eca-033772	Equus caballus	28.10	2.00e-27	115.00
IUUC-Eeu-035234	Erinaceus europaeus	32.24	3.00e-16	79.30
IUUC-Fca-036095	Felis catus	27.49	2.00e-25	109.00
IUUC-Fal-036986	Ficedula albicollis	24.14	2.00e-21	96.30
IUUC-Fox-037750	Fusarium oxysporum	26.23	2.00e-19	90.10
IUUC-Fso-038198	Fusarium solani	24.38	4.00e-12	65.50
IUUC-Gmo-039683	Gadus morhua	31.69	4.00e-36	145.00
IUUC-Gga-040530	Gallus gallus	31.69	4.00e-38	151.00
IUUC-Gac-041517	Gasterosteus aculeatus	30.65	2.00e-28	119.00
IUUC-Gma-043378	Glycine max	60.55	9.00e-175	605.00
IUUC-Ggo-045364	Gorilla gorilla	27.20	3.00e-27	115.00
IUUC-Hsa-046354	Homo sapiens	27.20	3.00e-27	115.00
IUUC-Hvu-047151	Hordeum vulgare	62.28	5.00e-111	393.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	28.70	2.00e-27	116.00
IUUC-Kpa-049275	Komagataella pastoris	24.06	4.00e-12	65.50
IUUC-Lch-049718	Latimeria chalumnae	27.14	1.00e-22	100.00
IUUC-Lpe-051256	Leersia perrieri	57.98	5.00e-160	556.00
IUUC-Loc-052398	Lepisosteus oculatus	30.12	1.00e-34	140.00
IUUC-Lma-053276	Leptosphaeria maculans	24.09	4.00e-18	85.90
IUUC-Laf-053562	Loxodonta africana	29.09	3.00e-28	118.00
IUUC-Mcc-055197	Macaca mulatta	26.99	3.00e-21	95.10
IUUC-Meu-056151	Macropus eugenii	29.23	4.00e-25	107.00
IUUC-Mtr-057940	Medicago truncatula	60.72	1.00e-173	602.00
IUUC-Mla-059117	Melampsora laricipopulina	29.10	6.00e-23	101.00
IUUC-Mga-059923	Meleagris gallopavo	32.56	4.00e-39	155.00
IUUC-Mvi-060555	Microbotryum violaceum	22.91	2.00e-16	80.10
IUUC-Mmr-061520	Microcebus murinus	27.10	5.00e-24	105.00
IUUC-Mdo-063063	Monodelphis domestica	31.16	2.00e-33	135.00
IUUC-Mmu-064294	Mus musculus	28.44	5.00e-28	118.00
IUUC-Mac-065598	Musa acuminata	59.91	6.00e-168	583.00
IUUC-Mpu-066831	Mustela putorius furo	27.58	3.00e-25	108.00
IUUC-Mlu-067222	Myotis lucifugus	28.23	5.00e-28	118.00
IUUC-Nfi-068314	Neosartorya fischeri	22.95	2.00e-13	70.10
IUUC-Ncr-068896	Neurospora crassa	23.29	6.00e-17	81.60
IUUC-Nle-069581	Nomascus leucogenys	27.73	4.00e-28	118.00
IUUC-Opr-070644	Ochotona princeps	28.96	1.00e-27	117.00
IUUC-Ont-072605	Oreochromis niloticus	30.90	5.00e-34	138.00
IUUC-Oan-072973	Ornithorhynchus anatinus	30.21	6.00e-30	124.00
IUUC-Ocu-074615	Oryctolagus cuniculus	28.92	4.00e-28	118.00
IUUC-Oba-075283	Oryza barthii	57.30	3.00e-149	521.00
IUUC-Obr-076605	Oryza brachyantha	58.77	2.00e-165	575.00
IUUC-Ogl-077512	Oryza glaberrima	58.05	2.00e-154	538.00
IUUC-Ogu-078329	Oryza glumaepatula	57.30	2.00e-149	521.00
IUUC-Oin-079980	Oryza indica	57.53	3.00e-149	521.00
IUUC-Olo-080516	Oryza longistaminata	56.40	3.00e-145	507.00
IUUC-Ome-081415	Oryza meridionalis	57.53	5.00e-154	536.00
IUUC-Oni-082985	Oryza nivara	57.53	3.00e-149	521.00
IUUC-Opu-084159	Oryza punctata	59.16	2.00e-164	571.00
IUUC-Oru-085137	Oryza rufipogon	58.09	3.00e-155	541.00
IUUC-Osa-085614	Oryza sativa	58.09	2.00e-155	541.00
IUUC-Ola-087044	Oryzias latipes	30.25	2.00e-32	132.00
IUUC-Olu-087680	Ostreococcus lucimarinus	27.50	6.00e-22	98.20
IUUC-Oga-088274	Otolemur garnettii	28.44	1.00e-26	113.00
IUUC-Oar-089826	Ovis aries	28.74	2.00e-30	125.00
IUUC-Ptr-091631	Pan troglodytes	27.20	3.00e-27	115.00
IUUC-Pan-092535	Papio anubis	26.67	5.00e-27	114.00
IUUC-Psi-093815	Pelodiscus sinensis	30.23	7.00e-33	134.00
IUUC-Pma-094474	Petromyzon marinus	28.91	4.00e-29	121.00
IUUC-Pno-094824	Phaeosphaeria nodorum	22.80	2.00e-17	83.20
IUUC-Pfo-096559	Poecilia formosa	30.22	2.00e-32	132.00
IUUC-Pab-098528	Pongo abelii	27.20	3.00e-27	115.00
IUUC-Pop-100064	Populus trichocarpa	60.68	5.00e-173	600.00
IUUC-Pca-100803	Procavia capensis	27.71	8.00e-27	114.00
IUUC-Ppe-101966	Prunus persica	59.28	2.00e-169	588.00
IUUC-Pva-103213	Pteropus vampyrus	29.52	3.00e-29	122.00
IUUC-Pgr-103436	Puccinia graminis	27.16	7.00e-22	97.80
IUUC-Ptt-103899	Puccinia triticina	26.89	2.00e-20	93.60
IUUC-Pte-104258	Pyrenophora teres	25.28	3.00e-18	85.90
IUUC-Pyt-104625	Pyrenophora triticirepentis	24.93	3.00e-18	85.90
IUUC-Rno-105087	Rattus norvegicus	28.53	2.00e-29	122.00
IUUC-Sha-107466	Sarcophilus harrisii	30.63	3.00e-32	132.00
IUUC-Smo-108958	Selaginella moellendorffii	63.11	0.00e+00	631.00
IUUC-Sit-109968	Setaria italica	59.68	5.00e-154	537.00
IUUC-Sly-111495	Solanum lycopersicum	58.62	5.00e-164	570.00
IUUC-Stu-112482	Solanum tuberosum	24.41	1.00e-10	60.80
IUUC-Sar-113272	Sorex araneus	28.61	1.00e-27	116.00
IUUC-Sbi-114706	Sorghum bicolor	55.92	2.00e-144	505.00
IUUC-Ssc-115437	Sus scrofa	28.70	9.00e-27	113.00
IUUC-Tgu-116602	Taeniopygia guttata	31.69	1.00e-36	146.00
IUUC-Tru-118698	Takifugu rubripes	30.29	4.00e-27	114.00
IUUC-Tsy-119027	Tarsius syrichta	28.42	6.00e-20	90.90
IUUC-Tni-119787	Tetraodon nigroviridis	29.91	1.00e-32	133.00
IUUC-Tca-121447	Theobroma cacao	60.09	8.00e-171	592.00
IUUC-Tre-121932	Trichoderma reesei	24.06	3.00e-20	92.40
IUUC-Tvi-122567	Trichoderma virens	24.18	6.00e-22	98.20
IUUC-Tae-123253	Triticum aestivum	59.36	6.00e-166	576.00
IUUC-Tur-126724	Triticum urartu	58.84	1.00e-165	575.00
IUUC-Tme-126958	Tuber melanosporum	24.30	3.00e-11	62.40
IUUC-Tbe-127680	Tupaia belangeri	26.22	3.00e-19	89.00
IUUC-Ttr-129123	Tursiops truncatus	25.70	1.00e-19	90.90
IUUC-Vda-129981	Verticillium dahliae	24.19	3.00e-21	96.30
IUUC-Vpa-130437	Vicugna pacos	27.27	4.00e-23	102.00
IUUC-Vvi-131001	Vitis vinifera	60.45	4.00e-173	600.00
IUUC-Xtr-132266	Xenopus tropicalis	33.75	1.00e-41	163.00
IUUC-Xma-133034	Xiphophorus maculatus	31.38	1.00e-32	134.00
IUUC-Yli-134341	Yarrowia lipolytica	21.93	1.00e-13	70.50
IUUC-Zma-135674	Zea mays	55.08	8.00e-147	513.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence