iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017210

Ensembl Protein ID

Bra013360.1-P

UniProt Accession

M4DA50; M4DA50_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra013360	Bra013360.1	Bra013360.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-28	98.3	272	309
UBD/Beta-Prp	1.10e-42	147.3	212	487

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf....sdtllvsGsdDgtikvWDlrtgvll 36
           Htdsv +la+      ++l+s+s D ++kvWD+ tg + 
   Q: 272  HTDSVLGLAWnkefR-NILASASADRKVKVWDVATGQCK 309
           **********95543.89******************986 PP

UBD/Beta-Prp

   S: 21   dksllatgsrdg.tikvwdvttgkl.............................lrslsgheaevtavkfspdgk.ilvtgseDrtikvwdlstgk 85
           +++++a gs+d+ ti++wd++  +                              + +  +h++ v  + ++++   il+++s Dr +kvwd+ tg+
   Q: 212  KGNFVAIGSKDSpTIEIWDLDVRDEvlpcvqlggieemkiikkkkskkekirkpIYKEGSHTDSVLGLAWNKEFRnILASASADRKVKVWDVATGQ 307
           689999999998689***988777677**********999999999999999999999999999*******99877******************** PP
   S: 86   cvhtlkghedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdl......ktgkllr 173
           c +t++ h+++v +++++ +  ++l+sGs d+t+ + d ++ + +  ++   ++ v +++++p +   +v +  D+tv+ +d+      +  +l  
   Q: 308  CKITMEHHTKEVQAVAWNHYApEVLLSGSFDQTVVLKDGRQPSHSG-FKWSVMSDVESLAWNPHNeHSFVVSLEDGTVKGFDIrvaqsgSDSDLKP 402
           *******************888**************9999999998.99**********************************8887764444444 PP
   S: 174  tl...tgghtdsvyslsfdsng.kelvsgsldgtvklwdlq..tgecvrtlnghtdnvksvrfs.pnderlvsgssDgsiriWdl 251
            +     ++++ v s+s++ +  + l++gs+d+tvklwdl+  + +c+ + +     v s+ fs +n  +l+ g+s g + +Wd+
   Q: 403  SFtiqAHDQDKGVSSISYNTSApNLLATGSMDKTVKLWDLSnnEPSCITSHKPKAGAVFSISFSaDNPFLLAIGGSKGELHVWDT 487
           447764458888999998877668999**************888889*****************66667778889********96 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MITALSWIPK GSLKAVPDAA EPPSKEEIKE LIESGAFVGS VDGSNEDGED IEEEEEEEDG 60
DQISEVDRAK AVAEAFGKSS NSKSSSMEVD EVAAAMKELD MDNYDEEDDG IELFSSGLGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATAACTG CACTTTCGTG GATACCTAAA GGGTCTTTAA AGGCTGTTCC TGATGCTGCT 60
GAGCCTCCTT CAAAGGAAGA GATCAAGGAG CTCATTGAGA GTGGAGCTTT CGTGGGAAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000884	Aegilops tauschii	53.98	1.00e-107	382.00
IUUC-Aml-001975	Ailuropoda melanoleuca	34.19	2.00e-59	223.00
IUUC-Atr-002719	Amborella trichopoda	55.24	7.00e-117	413.00
IUUC-Aly-005967	Arabidopsis lyrata	85.15	0.00e+00	779.00
IUUC-Ath-007642	Arabidopsis thaliana	80.23	0.00e+00	734.00
IUUC-Ago-007922	Ashbya gossypii	31.32	3.00e-42	166.00
IUUC-Ame-011810	Astyanax mexicanus	37.22	6.00e-58	218.00
IUUC-Bgr-012023	Blumeria graminis	33.91	7.00e-69	254.00
IUUC-Bta-012671	Bos taurus	35.53	2.00e-57	216.00
IUUC-Bdi-014598	Brachypodium distachyon	53.40	3.00e-128	451.00
IUUC-Bol-016451	Brassica oleracea	97.61	0.00e+00	842.00
IUUC-Cja-018931	Callithrix jacchus	35.90	1.00e-56	213.00
IUUC-Cho-024765	Choloepus hoffmanni	30.05	2.00e-34	139.00
IUUC-Cin-025441	Ciona intestinalis	31.93	6.00e-45	174.00
IUUC-Dno-029634	Dasypus novemcinctus	34.39	4.00e-61	228.00
IUUC-Dor-030767	Dipodomys ordii	37.60	4.00e-57	215.00
IUUC-Dme-032070	Drosophila melanogaster	30.21	4.00e-44	171.00
IUUC-Ete-032857	Echinops telfairi	36.62	8.00e-43	167.00
IUUC-Eca-033871	Equus caballus	33.95	4.00e-51	195.00
IUUC-Gmo-038715	Gadus morhua	38.64	3.00e-63	235.00
IUUC-Gga-040402	Gallus gallus	33.46	5.00e-64	238.00
IUUC-Ggo-044778	Gorilla gorilla	36.15	2.00e-57	216.00
IUUC-Hsa-046975	Homo sapiens	36.04	1.00e-57	216.00
IUUC-Hvu-047774	Hordeum vulgare	61.37	5.00e-78	283.00
IUUC-Itr-048829	Ictidomys tridecemlineatus	36.29	2.00e-58	219.00
IUUC-Lpe-050918	Leersia perrieri	60.15	1.00e-123	436.00
IUUC-Loc-051947	Lepisosteus oculatus	34.11	1.00e-63	237.00
IUUC-Laf-053737	Loxodonta africana	33.79	3.00e-61	229.00
IUUC-Meu-056892	Macropus eugenii	34.87	8.00e-41	160.00
IUUC-Mtr-058677	Medicago truncatula	60.48	2.00e-158	551.00
IUUC-Mmr-061729	Microcebus murinus	36.04	1.00e-57	217.00
IUUC-Mmu-063191	Mus musculus	34.72	1.00e-63	237.00
IUUC-Mac-064937	Musa acuminata	59.72	7.00e-141	493.00
IUUC-Nle-069444	Nomascus leucogenys	36.04	1.00e-57	216.00
IUUC-Oan-073312	Ornithorhynchus anatinus	35.71	4.00e-60	224.00
IUUC-Ocu-074548	Oryctolagus cuniculus	36.41	2.00e-58	219.00
IUUC-Oba-075486	Oryza barthii	52.60	4.00e-125	441.00
IUUC-Obr-076759	Oryza brachyantha	56.11	5.00e-133	467.00
IUUC-Ogu-078324	Oryza glumaepatula	48.90	2.00e-111	395.00
IUUC-Oin-079455	Oryza indica	54.71	1.00e-137	483.00
IUUC-Olo-080518	Oryza longistaminata	56.68	1.00e-117	416.00
IUUC-Ome-081585	Oryza meridionalis	54.46	1.00e-109	389.00
IUUC-Oni-082084	Oryza nivara	53.51	8.00e-130	456.00
IUUC-Oru-084211	Oryza rufipogon	53.51	8.00e-130	456.00
IUUC-Osa-085974	Oryza sativa	54.71	1.00e-137	483.00
IUUC-Oga-088626	Otolemur garnettii	36.67	2.00e-58	219.00
IUUC-Oar-089641	Ovis aries	35.80	3.00e-59	222.00
IUUC-Ptr-091379	Pan troglodytes	36.04	1.00e-57	216.00
IUUC-Psi-093753	Pelodiscus sinensis	37.56	2.00e-60	226.00
IUUC-Pma-094478	Petromyzon marinus	40.07	9.00e-49	186.00
IUUC-Ppa-095650	Physcomitrella patens	55.56	2.00e-121	429.00
IUUC-Pab-097912	Pongo abelii	35.78	5.00e-33	134.00
IUUC-Pop-099606	Populus trichocarpa	63.94	7.00e-168	583.00
IUUC-Pca-100653	Procavia capensis	33.43	4.00e-47	181.00
IUUC-Ppe-101910	Prunus persica	64.46	5.00e-165	573.00
IUUC-Rno-105173	Rattus norvegicus	33.79	2.00e-59	223.00
IUUC-Sce-106279	Saccharomyces cerevisiae	32.90	4.00e-48	185.00
IUUC-Sha-106556	Sarcophilus harrisii	36.41	7.00e-59	221.00
IUUC-Sit-110604	Setaria italica	54.29	2.00e-134	472.00
IUUC-Stu-112208	Solanum tuberosum	69.33	9.00e-90	323.00
IUUC-Sbi-114069	Sorghum bicolor	53.68	2.00e-131	462.00
IUUC-Tsy-119546	Tarsius syrichta	35.78	2.00e-60	226.00
IUUC-Tca-121431	Theobroma cacao	63.86	5.00e-171	593.00
IUUC-Tae-125103	Triticum aestivum	58.44	3.00e-118	418.00
IUUC-Tur-126252	Triticum urartu	52.40	2.00e-106	379.00
IUUC-Tme-127183	Tuber melanosporum	38.44	3.00e-64	239.00
IUUC-Vda-129705	Verticillium dahliae	42.13	2.00e-75	276.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence