iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-106031

Ensembl Protein ID

ENSRNOP00000072642.1

UniProt Accession

A0A0G2K3H7; A0A0G2K3H7_RAT

Genbank Protein ID

ENSRNOP00000072642

Protein Name

WD repeat domain 72

Genbank Nucleotide ID

AABR07070708

Gene Name

Wdr72

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000054889.1	ENSRNOT00000079508.1	ENSRNOP00000072642.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-22	77.5	60	100

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sd.tllvsGsdDgtikvWDlrtgvll 36
           gH++svtcla     s  +++vs++ +g + +WD+++g ++
   Q: 60   GHSASVTCLARardfSKqPYVVSAAENGEMCLWDVSSGQCV 100
           8********6556665569*******************997 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MRSALQAVAL WGRKAPPHSI TAIMITDDQR TIVTGSQEGQ LCLWSLSPEL KISAKELLFG 60
HSASVTCLAR ARDFSKQPYV VSAAENGEMC LWDVSSGQCV EKTTLPYRHT AICYYHCSFR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCAAATAATT GTTTTGGGAT TCGCTTAGCG AGGGTCAATG AGCCATTCGT TTGGTTGAGG 60
AATAGTGTCC CACTGTGTAG ATGTGTCTCT GCTTCTTTGT CTGGTCACCT ATTCATTGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005768--C:endosome
GO:0070166--P:enamel mineralization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001970	Ailuropoda melanoleuca	81.19	0.00e+00	1516.00
IUUC-Apl-003551	Anas platyrhynchos	61.02	0.00e+00	1114.00
IUUC-Aca-004824	Anolis carolinensis	47.74	0.00e+00	761.00
IUUC-Bta-013152	Bos taurus	78.83	0.00e+00	1444.00
IUUC-Cja-018912	Callithrix jacchus	80.32	0.00e+00	1457.00
IUUC-Cfa-020015	Canis familiaris	80.72	0.00e+00	1469.00
IUUC-Cpo-021559	Cavia porcellus	69.81	0.00e+00	1229.00
IUUC-Csa-023543	Chlorocebus sabaeus	82.02	0.00e+00	1496.00
IUUC-Cho-024824	Choloepus hoffmanni	73.75	0.00e+00	1196.00
IUUC-Dno-029168	Dasypus novemcinctus	76.90	0.00e+00	1283.00
IUUC-Dor-030878	Dipodomys ordii	82.85	0.00e+00	1023.00
IUUC-Ete-032495	Echinops telfairi	75.82	0.00e+00	1281.00
IUUC-Eca-033815	Equus caballus	81.73	0.00e+00	1516.00
IUUC-Eeu-034851	Erinaceus europaeus	70.95	0.00e+00	1183.00
IUUC-Fca-036375	Felis catus	78.23	0.00e+00	1448.00
IUUC-Fal-037045	Ficedula albicollis	60.43	0.00e+00	1089.00
IUUC-Gga-041155	Gallus gallus	61.24	0.00e+00	1078.00
IUUC-Ggo-044617	Gorilla gorilla	78.05	0.00e+00	1029.00
IUUC-Hsa-046257	Homo sapiens	80.53	0.00e+00	1484.00
IUUC-Itr-048101	Ictidomys tridecemlineatus	82.14	0.00e+00	1560.00
IUUC-Lch-049569	Latimeria chalumnae	49.79	0.00e+00	905.00
IUUC-Loc-052632	Lepisosteus oculatus	43.45	0.00e+00	717.00
IUUC-Mcc-055089	Macaca mulatta	81.80	0.00e+00	1478.00
IUUC-Mga-059629	Meleagris gallopavo	60.71	0.00e+00	1105.00
IUUC-Mmr-061454	Microcebus murinus	72.41	0.00e+00	1326.00
IUUC-Mdo-062816	Monodelphis domestica	70.81	0.00e+00	1277.00
IUUC-Mmu-063912	Mus musculus	93.47	0.00e+00	1725.00
IUUC-Mpu-066070	Mustela putorius furo	80.61	0.00e+00	1486.00
IUUC-Mlu-067423	Myotis lucifugus	79.37	0.00e+00	1427.00
IUUC-Nle-069699	Nomascus leucogenys	81.73	0.00e+00	1526.00
IUUC-Opr-070419	Ochotona princeps	67.96	0.00e+00	932.00
IUUC-Oan-073209	Ornithorhynchus anatinus	63.06	0.00e+00	1059.00
IUUC-Ocu-074545	Oryctolagus cuniculus	79.61	0.00e+00	1471.00
IUUC-Olu-087828	Ostreococcus lucimarinus	25.79	6.00e-09	57.00
IUUC-Oga-088487	Otolemur garnettii	80.41	0.00e+00	1470.00
IUUC-Oar-090341	Ovis aries	77.97	0.00e+00	1421.00
IUUC-Ptr-091269	Pan troglodytes	81.30	0.00e+00	1484.00
IUUC-Pan-092329	Papio anubis	82.12	0.00e+00	1496.00
IUUC-Psi-093788	Pelodiscus sinensis	62.62	0.00e+00	1159.00
IUUC-Pab-098433	Pongo abelii	81.80	0.00e+00	1489.00
IUUC-Pva-102405	Pteropus vampyrus	71.54	0.00e+00	1246.00
IUUC-Sha-107018	Sarcophilus harrisii	70.97	0.00e+00	1295.00
IUUC-Sar-113639	Sorex araneus	73.62	0.00e+00	1336.00
IUUC-Tgu-116980	Taeniopygia guttata	59.85	0.00e+00	1102.00
IUUC-Tsy-118866	Tarsius syrichta	74.70	0.00e+00	1352.00
IUUC-Tbe-127824	Tupaia belangeri	86.44	0.00e+00	826.00
IUUC-Ttr-128296	Tursiops truncatus	77.84	0.00e+00	1400.00
IUUC-Vpa-130496	Vicugna pacos	73.62	0.00e+00	1337.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence