iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bgr-012054

Ensembl Protein ID

CCU77047

UniProt Accession

N1JGL5; N1JGL5_BLUG1

Genbank Protein ID

CCU77047.1

Protein Name

U3 small nucleolar RNA-associated protein

Genbank Nucleotide ID

CAUH01003284

Gene Name

BGHDH14_bgh03606

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGHDH14_bgh03606	CCU77047	CCU77047

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-48	159.5	656	701
UBD/Beta-Prp	7.60e-88	292.9	387	663

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.........sd.tllvsGsdDgtikvWDlrtgvll 36
           gH++sv  +++             ++vs+++Dg +kvWD+ tg + 
   Q: 656  GHSNSVLKVCWlqplpsverKKyVHVVSAGGDGLVKVWDVNTGEVA 701
           8************9987665223559**************999875 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkf.spdksllatgsrdgtikvwdvttgkl...........lrslsgheaevtavkfspdgkilvtgseDrtikvwdls....tgkcvht 89
           ++g+h++ i    +  pd+slla +  ++ +++ ++++g+            + +l+ghe+ v +++++ +g +++tgs+D+t+++w ++    +++c  t
   Q: 387  ISGTHDEIIDLG-YlLPDQSLLALATNSEDVRIVSLREGDNvsgvatyfgadVTQLQGHEDIVICLDIDWSGHWIATGSKDNTARLWRIDainsSFSCYKT 486
           678899999855.559************************99*********************************************77766789****** PP
   S: 90   lkghedsvls..................lsfspsgdklvsGshdrtirvwdletgqclee..........tlsghdgvvncvvvhpdgnllvsGslDrtvr 162
           l+gh +s+ +                  l++ p  +++++Gs+d+ti+ w+++  + + +          t + hd+ +n ++++ +++l++s+s Drtv+
   Q: 487  LTGHAESIGAiclphqpppesspafkspLEYPP--SFVLTGSQDQTIKRWEIPICSDVPDpkgkaprakyTRKAHDKDINAIEINHNSQLFASASQDRTVK 585
           ***********************9999999999..****************************************************************** PP
   S: 163  lWdlktgkllrtltgghtdsvyslsfdsng..............kelvsgsldgtvklwdlqtgecvrtlnghtdnvks 227
           +Wd + g++   l+g h++ v s++f++                  +++gs d+t+++w+l+  +c+ t++gh++ v+ 
   Q: 586  IWDCEEGEVQGVLRG-HKRGVWSVKFSPPEilgqialtgpstkkGLVMTGSGDKTIRIWSLSDFSCLSTFEGHSNSVLK 663
           **************9.*********99999999999999999988899***************************9986 PP

Organism

Blumeria graminis

Protein Sequence
(Fasta)

MSNKALYQKS YEVAKTLRPI YTGGSIDLDE HGRILATTLG EDALLTDLVT GGQLAKIEGY 60
SNFLSGCRAH FYVDLLFLTD PPFVTTNRYV VTPSASHLIV CSRSLSMRIY ALSSTTESSI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCAAACA AAGCGCTCTA CCAAAAATCC TATGAAGTAG CAAAAACATT ACGGCCGATA 60
TACACTGGTG GTAGCATTGA TTTAGACGAA CATGGAAGAA TTCTTGCCAC AACCCTTGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	30.78	8.00e-92	329.00
IUUC-Aml-002376	Ailuropoda melanoleuca	29.33	1.00e-101	362.00
IUUC-Atr-002486	Amborella trichopoda	28.60	2.00e-101	362.00
IUUC-Apl-003519	Anas platyrhynchos	30.18	1.00e-89	322.00
IUUC-Aca-004957	Anolis carolinensis	37.33	1.00e-38	151.00
IUUC-Aly-006152	Arabidopsis lyrata	28.95	8.00e-93	333.00
IUUC-Ath-006966	Arabidopsis thaliana	29.05	3.00e-92	331.00
IUUC-Ago-007746	Ashbya gossypii	30.17	8.00e-107	379.00
IUUC-Acl-008009	Aspergillus clavatus	46.72	0.00e+00	810.00
IUUC-Afl-008681	Aspergillus flavus	47.08	0.00e+00	759.00
IUUC-Afu-008798	Aspergillus fumigatus	47.29	0.00e+00	805.00
IUUC-Ani-009278	Aspergillus nidulans	46.04	0.00e+00	801.00
IUUC-Ang-009640	Aspergillus niger	46.32	0.00e+00	801.00
IUUC-Aor-010160	Aspergillus oryzae	47.08	0.00e+00	758.00
IUUC-Ate-010320	Aspergillus terreus	48.12	0.00e+00	816.00
IUUC-Bta-012611	Bos taurus	28.35	1.00e-95	342.00
IUUC-Bci-013797	Botrytis cinerea	61.94	0.00e+00	1128.00
IUUC-Bdi-014384	Brachypodium distachyon	30.02	4.00e-105	374.00
IUUC-Bol-015097	Brassica oleracea	28.63	6.00e-91	327.00
IUUC-Bra-017798	Brassica rapa	28.94	5.00e-92	330.00
IUUC-Cel-018664	Caenorhabditis elegans	26.02	1.00e-67	249.00
IUUC-Cja-019092	Callithrix jacchus	28.43	6.00e-101	360.00
IUUC-Cfa-021040	Canis familiaris	28.59	3.00e-98	350.00
IUUC-Cpo-022529	Cavia porcellus	28.90	6.00e-96	343.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	43.31	1.00e-33	133.00
IUUC-Csa-024205	Chlorocebus sabaeus	28.98	1.00e-103	368.00
IUUC-Cin-025560	Ciona intestinalis	27.53	6.00e-85	306.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	53.84	0.00e+00	973.00
IUUC-Cne-027082	Cryptococcus neoformans	29.45	6.00e-107	380.00
IUUC-Cme-027159	Cyanidioschyzon merolae	24.26	2.00e-21	96.30
IUUC-Dre-028138	Danio rerio	29.40	3.00e-88	318.00
IUUC-Dno-029914	Dasypus novemcinctus	26.50	1.00e-55	209.00
IUUC-Dor-030685	Dipodomys ordii	31.58	3.00e-73	267.00
IUUC-Dse-031429	Dothistroma septosporum	47.21	0.00e+00	821.00
IUUC-Dme-031995	Drosophila melanogaster	25.21	4.00e-58	217.00
IUUC-Ete-033086	Echinops telfairi	32.83	2.00e-64	238.00
IUUC-Eca-034354	Equus caballus	28.87	4.00e-97	347.00
IUUC-Eeu-034832	Erinaceus europaeus	32.22	6.00e-64	237.00
IUUC-Fca-036136	Felis catus	28.59	4.00e-93	333.00
IUUC-Fal-036859	Ficedula albicollis	29.88	1.00e-101	362.00
IUUC-Fox-037863	Fusarium oxysporum	56.62	0.00e+00	889.00
IUUC-Fso-038389	Fusarium solani	56.18	0.00e+00	990.00
IUUC-Gmo-038711	Gadus morhua	25.82	4.00e-74	270.00
IUUC-Ggr-039820	Gaeumannomyces graminis	51.55	0.00e+00	889.00
IUUC-Gga-040263	Gallus gallus	28.59	4.00e-99	353.00
IUUC-Gac-041291	Gasterosteus aculeatus	27.92	5.00e-94	337.00
IUUC-Gma-044026	Glycine max	30.43	2.00e-101	361.00
IUUC-Ggo-044693	Gorilla gorilla	29.08	1.00e-100	358.00
IUUC-Hsa-046048	Homo sapiens	28.79	6.00e-101	360.00
IUUC-Hvu-047608	Hordeum vulgare	30.03	4.00e-105	374.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	29.44	4.00e-110	390.00
IUUC-Kpa-049209	Komagataella pastoris	30.48	4.00e-120	423.00
IUUC-Lch-050085	Latimeria chalumnae	29.93	3.00e-90	324.00
IUUC-Lpe-050945	Leersia perrieri	29.86	2.00e-98	352.00
IUUC-Loc-052679	Lepisosteus oculatus	28.80	2.00e-105	375.00
IUUC-Laf-053685	Loxodonta africana	29.08	1.00e-94	338.00
IUUC-Mcc-055861	Macaca mulatta	28.76	1.00e-99	355.00
IUUC-Meu-056820	Macropus eugenii	26.21	3.00e-39	154.00
IUUC-Mor-057234	Magnaporthe oryzae	53.22	0.00e+00	819.00
IUUC-Mpo-057456	Magnaporthe poae	53.15	0.00e+00	725.00
IUUC-Mtr-058122	Medicago truncatula	30.65	9.00e-104	369.00
IUUC-Mla-058980	Melampsora laricipopulina	29.42	1.00e-96	345.00
IUUC-Mga-060080	Meleagris gallopavo	28.69	1.00e-97	349.00
IUUC-Mvi-060338	Microbotryum violaceum	31.52	1.00e-125	442.00
IUUC-Mmr-060762	Microcebus murinus	28.82	3.00e-99	354.00
IUUC-Mdo-061975	Monodelphis domestica	28.70	7.00e-93	333.00
IUUC-Mmu-064038	Mus musculus	28.32	8.00e-100	356.00
IUUC-Mac-065189	Musa acuminata	28.79	7.00e-102	363.00
IUUC-Mpu-066526	Mustela putorius furo	29.05	6.00e-97	346.00
IUUC-Mlu-067716	Myotis lucifugus	28.32	3.00e-104	371.00
IUUC-Nfi-068474	Neosartorya fischeri	47.76	0.00e+00	803.00
IUUC-Ncr-068826	Neurospora crassa	50.99	0.00e+00	887.00
IUUC-Nle-069832	Nomascus leucogenys	28.98	6.00e-104	370.00
IUUC-Opr-071183	Ochotona princeps	28.32	6.00e-94	336.00
IUUC-Ont-072371	Oreochromis niloticus	28.21	2.00e-93	335.00
IUUC-Oan-073491	Ornithorhynchus anatinus	27.22	2.00e-75	275.00
IUUC-Oba-075963	Oryza barthii	30.36	1.00e-98	352.00
IUUC-Obr-076173	Oryza brachyantha	31.42	3.00e-98	351.00
IUUC-Ogl-077692	Oryza glaberrima	30.25	7.00e-98	350.00
IUUC-Ogu-078965	Oryza glumaepatula	30.34	2.00e-98	352.00
IUUC-Oin-079708	Oryza indica	30.36	3.00e-98	351.00
IUUC-Olo-080679	Oryza longistaminata	30.36	4.00e-98	350.00
IUUC-Oni-082960	Oryza nivara	30.48	1.00e-98	352.00
IUUC-Opu-083282	Oryza punctata	29.99	1.00e-95	342.00
IUUC-Oru-085224	Oryza rufipogon	30.36	1.00e-98	352.00
IUUC-Osa-085320	Oryza sativa	30.36	1.00e-98	352.00
IUUC-Ola-086370	Oryzias latipes	22.64	8.00e-29	120.00
IUUC-Olu-087814	Ostreococcus lucimarinus	26.32	5.00e-60	224.00
IUUC-Oga-088458	Otolemur garnettii	29.50	3.00e-106	377.00
IUUC-Oar-090032	Ovis aries	27.74	6.00e-72	263.00
IUUC-Ptr-090749	Pan troglodytes	28.71	1.00e-100	358.00
IUUC-Pan-091691	Papio anubis	28.21	4.00e-91	327.00
IUUC-Psi-093200	Pelodiscus sinensis	29.56	3.00e-98	350.00
IUUC-Pma-094165	Petromyzon marinus	27.72	6.00e-71	259.00
IUUC-Pno-095048	Phaeosphaeria nodorum	51.29	0.00e+00	748.00
IUUC-Ppa-095336	Physcomitrella patens	28.82	1.00e-95	342.00
IUUC-Pfo-096132	Poecilia formosa	28.50	2.00e-91	328.00
IUUC-Pab-097855	Pongo abelii	29.08	2.00e-103	368.00
IUUC-Pop-099434	Populus trichocarpa	29.56	2.00e-96	345.00
IUUC-Pca-100232	Procavia capensis	38.19	4.00e-37	147.00
IUUC-Ppe-101665	Prunus persica	30.07	1.00e-99	355.00
IUUC-Pva-102178	Pteropus vampyrus	28.99	8.00e-101	359.00
IUUC-Pgr-103288	Puccinia graminis	26.72	1.00e-84	305.00
IUUC-Ptt-103808	Puccinia triticina	27.57	1.00e-80	292.00
IUUC-Pte-104205	Pyrenophora teres	50.77	0.00e+00	885.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	49.78	0.00e+00	856.00
IUUC-Rno-105617	Rattus norvegicus	28.80	3.00e-98	350.00
IUUC-Sce-106281	Saccharomyces cerevisiae	31.49	2.00e-115	408.00
IUUC-Sha-107378	Sarcophilus harrisii	28.45	4.00e-90	323.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	34.48	2.00e-144	504.00
IUUC-Spo-108361	Schizosaccharomyces pombe	33.96	2.00e-125	441.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	63.91	0.00e+00	1162.00
IUUC-Smo-109257	Selaginella moellendorffii	29.65	7.00e-102	363.00
IUUC-Sit-110258	Setaria italica	30.25	2.00e-102	365.00
IUUC-Sly-111521	Solanum lycopersicum	29.75	7.00e-96	343.00
IUUC-Stu-112718	Solanum tuberosum	41.30	4.00e-23	98.20
IUUC-Sbi-114768	Sorghum bicolor	31.26	3.00e-104	370.00
IUUC-Sre-115159	Sporisorium reilianum	30.03	6.00e-84	303.00
IUUC-Ssc-116342	Sus scrofa	28.09	6.00e-49	187.00
IUUC-Tgu-117320	Taeniopygia guttata	29.28	2.00e-96	345.00
IUUC-Tru-118024	Takifugu rubripes	28.25	2.00e-90	325.00
IUUC-Tni-119971	Tetraodon nigroviridis	28.12	2.00e-87	314.00
IUUC-Tca-121248	Theobroma cacao	29.14	8.00e-102	363.00
IUUC-Tre-122079	Trichoderma reesei	56.83	0.00e+00	979.00
IUUC-Tvi-122554	Trichoderma virens	55.78	0.00e+00	959.00
IUUC-Tae-123690	Triticum aestivum	32.21	1.00e-105	375.00
IUUC-Tur-126436	Triticum urartu	31.36	9.00e-91	325.00
IUUC-Tme-126942	Tuber melanosporum	46.68	0.00e+00	699.00
IUUC-Ttr-128964	Tursiops truncatus	28.28	1.00e-98	352.00
IUUC-Uma-129473	Ustilago maydis	28.63	4.00e-85	308.00
IUUC-Vda-129749	Verticillium dahliae	57.13	0.00e+00	886.00
IUUC-Vvi-131511	Vitis vinifera	30.54	6.00e-103	366.00
IUUC-Xtr-132816	Xenopus tropicalis	24.89	5.00e-65	240.00
IUUC-Xma-133672	Xiphophorus maculatus	28.07	9.00e-92	329.00
IUUC-Yli-134602	Yarrowia lipolytica	38.77	6.00e-167	579.00
IUUC-Zma-135559	Zea mays	30.48	2.00e-100	358.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence