iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076173

Ensembl Protein ID

OB04G30510.1

UniProt Accession

J3M0X6; J3M0X6_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB04G30510	OB04G30510.1	OB04G30510.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.50e-60	196.8	142	181
UBD/Beta-Prp	1.50e-105	353.3	434	659

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvll 36
           gHt+ vt + f   +   ll sGs Dgt++vW+l + +++
   Q: 142  GHTGVVTTVMFhkdPKrLLLFSGSEDGTVRVWNLESKKCV 181
           8***********76555668**************999886 PP

UBD/Beta-Prp

   S: 49   sgheaevtavkfspdgk.ilvtgseDrtikvwdls..........tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetls 134
           +gh +++ +v fs+++k ++v+gs+Drtik+w+ +            k   ++ +h++++ sls+sp++  + sGs+drt+ +w+l++   +  +l+
   Q: 434  KGHLGAIGSVAFSKKSKnFFVSGSSDRTIKIWSWDdtlddvdsevPLKAKAVVAAHDKDINSLSVSPNDGLVCSGSEDRTACIWKLPNLVSSV-VLK 529
           689999******999888**************44444455556665566666779**************************************.*** PP
   S: 135  ghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs 231
           gh++ +++v+++p +++++++s Drtv++W ++ g++l+t++g ht+sv   sf s g+++vs++ dg vklw ++t+ec+ t+  h+  v+ +++ 
   Q: 530  GHKRGIWSVEFSPVEQCVITSSGDRTVKIWAVADGSCLKTFEG-HTSSVLRASFLSHGTQFVSCGSDGLVKLWTIKTNECIATYDKHDGKVWALAVG 625
           ******************************************9.***************************************************** PP
   S: 232  pnderlvsgssDgsiriW.dlrsgdllktlqlhn 264
           +++e l++g+ D ++++W d++  d    + +++
   Q: 626  RKTEMLATGGTDAVLNLWhDCTVEDKQEDFRKKE 659
           ******************9998888777776665 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MAQWVDPHFY TGGPFAVGSA PGSGEGVDAG AFLACACGGE VRVVSAADAF AIGEPIEGEN 60
EAVTALALSP DSRLLFAAGH SRLIRVWDLA SRTCTRSWKG HDGPIRAMAC HASGGLLATA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCCAAT GGGTGGACCC ACATGTCAGT GCAATGGTCT CATCTCCACG TCACGGCCTC 60
TGAAGATATG GGCCCACATG TCGGGAACGC CCTTCTCCAT TTCACCCGCC ACTTGAGCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0051301--P:cell division
GO:0009793--P:embryo development ending in seed dormancy
GO:0009880--P:embryonic pattern specification
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	80.73	0.00e+00	1313.00
IUUC-Aml-002376	Ailuropoda melanoleuca	38.93	3.00e-156	544.00
IUUC-Atr-002486	Amborella trichopoda	64.14	0.00e+00	1082.00
IUUC-Apl-003519	Anas platyrhynchos	33.42	2.00e-120	425.00
IUUC-Aca-004363	Anolis carolinensis	35.45	8.00e-75	273.00
IUUC-Aly-006152	Arabidopsis lyrata	63.40	0.00e+00	1044.00
IUUC-Ath-006966	Arabidopsis thaliana	63.38	0.00e+00	1049.00
IUUC-Ago-007746	Ashbya gossypii	30.78	4.00e-107	381.00
IUUC-Acl-008009	Aspergillus clavatus	29.76	1.00e-103	370.00
IUUC-Afl-008681	Aspergillus flavus	30.91	4.00e-100	358.00
IUUC-Afu-008798	Aspergillus fumigatus	29.52	4.00e-97	348.00
IUUC-Ani-009278	Aspergillus nidulans	30.01	2.00e-110	392.00
IUUC-Ang-009640	Aspergillus niger	31.80	5.00e-110	391.00
IUUC-Aor-010160	Aspergillus oryzae	30.87	1.00e-99	357.00
IUUC-Ate-010320	Aspergillus terreus	30.84	2.00e-108	386.00
IUUC-Ame-010930	Astyanax mexicanus	36.82	5.00e-37	146.00
IUUC-Bgr-012054	Blumeria graminis	31.42	1.00e-100	360.00
IUUC-Bta-012611	Bos taurus	38.81	2.00e-149	522.00
IUUC-Bci-013797	Botrytis cinerea	29.62	3.00e-105	375.00
IUUC-Bdi-014384	Brachypodium distachyon	87.95	0.00e+00	1472.00
IUUC-Bol-016483	Brassica oleracea	61.96	0.00e+00	1040.00
IUUC-Bra-017798	Brassica rapa	62.13	0.00e+00	1018.00
IUUC-Cel-018664	Caenorhabditis elegans	28.69	1.00e-95	343.00
IUUC-Cja-019092	Callithrix jacchus	38.46	3.00e-156	544.00
IUUC-Cfa-021040	Canis familiaris	38.43	4.00e-154	537.00
IUUC-Cpo-022529	Cavia porcellus	38.09	3.00e-146	511.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	55.47	5.00e-48	181.00
IUUC-Csa-024205	Chlorocebus sabaeus	39.02	3.00e-158	551.00
IUUC-Cin-025560	Ciona intestinalis	36.23	3.00e-148	518.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	31.86	3.00e-117	415.00
IUUC-Cne-027082	Cryptococcus neoformans	30.88	2.00e-115	409.00
IUUC-Cme-027159	Cyanidioschyzon merolae	24.29	3.00e-36	147.00
IUUC-Dre-028138	Danio rerio	37.46	2.00e-154	538.00
IUUC-Dno-029914	Dasypus novemcinctus	29.85	9.00e-61	227.00
IUUC-Dor-030685	Dipodomys ordii	40.80	5.00e-104	371.00
IUUC-Dse-031429	Dothistroma septosporum	30.06	3.00e-109	389.00
IUUC-Dme-031995	Drosophila melanogaster	29.60	6.00e-93	334.00
IUUC-Ete-033086	Echinops telfairi	41.65	6.00e-94	337.00
IUUC-Eca-034354	Equus caballus	38.39	2.00e-146	512.00
IUUC-Eeu-034832	Erinaceus europaeus	40.04	2.00e-90	326.00
IUUC-Fca-036136	Felis catus	34.65	2.00e-128	452.00
IUUC-Fal-036859	Ficedula albicollis	39.00	2.00e-160	558.00
IUUC-Fox-037863	Fusarium oxysporum	30.63	2.00e-106	379.00
IUUC-Fso-038389	Fusarium solani	29.90	1.00e-111	396.00
IUUC-Gmo-038711	Gadus morhua	35.50	3.00e-137	481.00
IUUC-Ggr-039820	Gaeumannomyces graminis	29.35	5.00e-100	358.00
IUUC-Gga-040263	Gallus gallus	38.07	9.00e-159	553.00
IUUC-Gac-041291	Gasterosteus aculeatus	37.84	1.00e-160	560.00
IUUC-Gma-044026	Glycine max	66.30	0.00e+00	1105.00
IUUC-Ggo-044693	Gorilla gorilla	38.75	5.00e-155	540.00
IUUC-Hsa-046048	Homo sapiens	38.62	2.00e-154	539.00
IUUC-Hvu-047608	Hordeum vulgare	86.52	0.00e+00	1453.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	37.84	4.00e-159	554.00
IUUC-Kpa-049209	Komagataella pastoris	31.69	4.00e-116	411.00
IUUC-Lch-050085	Latimeria chalumnae	37.95	1.00e-148	519.00
IUUC-Lpe-050945	Leersia perrieri	90.24	0.00e+00	1487.00
IUUC-Loc-052679	Lepisosteus oculatus	39.16	1.00e-173	602.00
IUUC-Laf-053685	Loxodonta africana	37.39	1.00e-142	499.00
IUUC-Mcc-055861	Macaca mulatta	38.77	4.00e-154	537.00
IUUC-Meu-056820	Macropus eugenii	35.54	9.00e-115	406.00
IUUC-Mor-057234	Magnaporthe oryzae	29.71	5.00e-98	351.00
IUUC-Mpo-057456	Magnaporthe poae	28.63	2.00e-74	272.00
IUUC-Mtr-058122	Medicago truncatula	63.51	0.00e+00	1085.00
IUUC-Mla-058980	Melampsora laricipopulina	30.67	5.00e-90	325.00
IUUC-Mga-060080	Meleagris gallopavo	36.77	5.00e-157	547.00
IUUC-Mvi-060338	Microbotryum violaceum	35.82	3.00e-143	501.00
IUUC-Mmr-060762	Microcebus murinus	38.60	1.00e-151	530.00
IUUC-Mdo-061975	Monodelphis domestica	39.55	3.00e-154	538.00
IUUC-Mmu-064038	Mus musculus	39.15	9.00e-154	536.00
IUUC-Mac-065189	Musa acuminata	68.24	0.00e+00	1178.00
IUUC-Mpu-066526	Mustela putorius furo	38.93	2.00e-149	521.00
IUUC-Mlu-067716	Myotis lucifugus	38.91	2.00e-164	572.00
IUUC-Nfi-068474	Neosartorya fischeri	29.49	1.00e-101	363.00
IUUC-Ncr-068826	Neurospora crassa	28.82	3.00e-99	355.00
IUUC-Nle-069832	Nomascus leucogenys	38.39	1.00e-156	545.00
IUUC-Opr-071183	Ochotona princeps	38.31	4.00e-148	517.00
IUUC-Ont-072371	Oreochromis niloticus	38.84	5.00e-166	577.00
IUUC-Oan-073491	Ornithorhynchus anatinus	37.32	2.00e-127	449.00
IUUC-Oba-075963	Oryza barthii	93.61	0.00e+00	1530.00
IUUC-Ogl-077692	Oryza glaberrima	93.75	0.00e+00	1523.00
IUUC-Ogu-078965	Oryza glumaepatula	93.49	0.00e+00	1530.00
IUUC-Oin-079708	Oryza indica	93.37	0.00e+00	1525.00
IUUC-Olo-080679	Oryza longistaminata	93.98	0.00e+00	1532.00
IUUC-Oni-082960	Oryza nivara	93.25	0.00e+00	1523.00
IUUC-Opu-083282	Oryza punctata	91.56	0.00e+00	1489.00
IUUC-Oru-085224	Oryza rufipogon	93.37	0.00e+00	1527.00
IUUC-Osa-085320	Oryza sativa	93.37	0.00e+00	1527.00
IUUC-Ola-086370	Oryzias latipes	32.49	1.00e-74	273.00
IUUC-Olu-087814	Ostreococcus lucimarinus	35.53	4.00e-128	451.00
IUUC-Oga-088458	Otolemur garnettii	39.06	2.00e-160	558.00
IUUC-Oar-090032	Ovis aries	37.42	1.00e-115	409.00
IUUC-Ptr-090749	Pan troglodytes	38.62	8.00e-155	540.00
IUUC-Pan-091691	Papio anubis	37.52	3.00e-144	504.00
IUUC-Psi-093200	Pelodiscus sinensis	37.09	7.00e-159	553.00
IUUC-Pma-094165	Petromyzon marinus	37.08	6.00e-112	397.00
IUUC-Pno-095048	Phaeosphaeria nodorum	31.11	3.00e-93	335.00
IUUC-Ppa-095336	Physcomitrella patens	53.25	0.00e+00	853.00
IUUC-Pfo-096132	Poecilia formosa	40.07	6.00e-161	560.00
IUUC-Pab-097855	Pongo abelii	38.64	6.00e-158	550.00
IUUC-Pop-099434	Populus trichocarpa	62.08	0.00e+00	1040.00
IUUC-Pca-100232	Procavia capensis	37.04	2.00e-53	203.00
IUUC-Ppe-101665	Prunus persica	63.42	0.00e+00	1081.00
IUUC-Pva-102178	Pteropus vampyrus	38.89	4.00e-155	541.00
IUUC-Pgr-103288	Puccinia graminis	29.70	9.00e-89	320.00
IUUC-Ptt-103808	Puccinia triticina	31.03	4.00e-84	305.00
IUUC-Pte-104205	Pyrenophora teres	32.30	5.00e-109	387.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	32.34	1.00e-102	366.00
IUUC-Rno-105617	Rattus norvegicus	39.62	2.00e-157	548.00
IUUC-Sce-106281	Saccharomyces cerevisiae	30.84	3.00e-107	382.00
IUUC-Sha-107378	Sarcophilus harrisii	39.88	7.00e-153	533.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	32.84	1.00e-115	409.00
IUUC-Spo-108361	Schizosaccharomyces pombe	33.50	1.00e-120	426.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	30.29	6.00e-110	390.00
IUUC-Smo-109257	Selaginella moellendorffii	53.18	0.00e+00	866.00
IUUC-Sit-110258	Setaria italica	86.21	0.00e+00	1473.00
IUUC-Sly-111521	Solanum lycopersicum	62.83	0.00e+00	1053.00
IUUC-Stu-112718	Solanum tuberosum	70.07	1.00e-52	197.00
IUUC-Sar-113586	Sorex araneus	43.75	8.00e-25	107.00
IUUC-Sbi-114768	Sorghum bicolor	85.58	0.00e+00	1450.00
IUUC-Sre-115159	Sporisorium reilianum	34.18	2.00e-94	340.00
IUUC-Ssc-116342	Sus scrofa	30.33	1.00e-70	259.00
IUUC-Tgu-117320	Taeniopygia guttata	38.29	1.00e-150	525.00
IUUC-Tru-118024	Takifugu rubripes	38.34	6.00e-159	553.00
IUUC-Tni-119971	Tetraodon nigroviridis	38.85	2.00e-163	568.00
IUUC-Tca-121248	Theobroma cacao	67.62	0.00e+00	1078.00
IUUC-Tre-122079	Trichoderma reesei	29.26	3.00e-106	378.00
IUUC-Tvi-122554	Trichoderma virens	28.94	3.00e-105	375.00
IUUC-Tae-125845	Triticum aestivum	87.03	0.00e+00	1453.00
IUUC-Tur-126436	Triticum urartu	80.29	0.00e+00	1181.00
IUUC-Tme-126942	Tuber melanosporum	34.14	6.00e-116	410.00
IUUC-Tbe-127418	Tupaia belangeri	26.99	2.00e-26	112.00
IUUC-Ttr-128964	Tursiops truncatus	37.44	5.00e-151	527.00
IUUC-Uma-129473	Ustilago maydis	32.08	1.00e-98	353.00
IUUC-Vda-129749	Verticillium dahliae	29.96	5.00e-104	371.00
IUUC-Vvi-131511	Vitis vinifera	66.46	0.00e+00	1089.00
IUUC-Xtr-132816	Xenopus tropicalis	33.50	4.00e-129	454.00
IUUC-Xma-133672	Xiphophorus maculatus	40.02	4.00e-166	577.00
IUUC-Yli-134602	Yarrowia lipolytica	36.61	4.00e-139	488.00
IUUC-Zma-135559	Zea mays	82.06	0.00e+00	1407.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence