iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cja-019942

Ensembl Protein ID

ENSCJAP00000028466.1

UniProt Accession

F6V3S3; F6V3S3_CALJA

Genbank Protein ID

JAB13804.1; JAB32687.1; JAB38792.1; JAB49849.1

Protein Name

Cirhin

Genbank Nucleotide ID

ACFV01013495; GAMR01001245; GAMQ01003059; GAMP01002906

Gene Name

CIRH1A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000015411.2	ENSCJAT00000030081.1	ENSCJAP00000028466.1
ENSCJAG00000015411.2	ENSCJAT00000030073.2	ENSCJAP00000028458.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-14	55.0	196	231

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sdtllvsGsdDgtikvWDlrtgvllks 38
           + v+++af sd++++s    g+++ WD  tg+l+ks
   Q: 196  CIVWGVAFlSDGTVISVDSAGKVQFWDSATGTLVKS 231
           67999**9*99778888888**********999875 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MGEFKVHRVR FFNYVPSAIR CVAYNNQSNR LAVSRTDGTV EIYNLSANYF QEKFFPGHES 60
RATEALCWAE GQRLFSAGLN GEIIEYDLQA LNIKYAMDAF GGPIWSMAAS PSGSQLLVGC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGACCACTT CCGGGGCAGA GCCTGAGAGC GCGCGCGCAC GTGGGGCCAG GTCGGAGAGA 60
GGTGAGCGCC GGGAAGGAGA GCGGCGGGCA GCTGGTGAGT TGGGGAAAGC GTGTGGGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005694--C:chromosome
GO:0001650--C:fibrillar center
GO:0034455--C:t-UTP complex
GO:0003723--F:RNA binding
GO:0030490--P:maturation of SSU-rRNA
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

cjc:100401215

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001161	Aegilops tauschii	24.92	2.00e-46	180.00
IUUC-Aml-001310	Ailuropoda melanoleuca	92.86	0.00e+00	1353.00
IUUC-Atr-003076	Amborella trichopoda	22.86	4.00e-36	146.00
IUUC-Apl-003367	Anas platyrhynchos	60.57	3.00e-59	220.00
IUUC-Aca-004429	Anolis carolinensis	60.81	1.00e-144	505.00
IUUC-Aly-006271	Arabidopsis lyrata	23.55	6.00e-42	166.00
IUUC-Ath-007331	Arabidopsis thaliana	24.74	8.00e-40	159.00
IUUC-Ago-007843	Ashbya gossypii	27.16	2.00e-40	160.00
IUUC-Acl-008229	Aspergillus clavatus	26.61	5.00e-40	159.00
IUUC-Afl-008438	Aspergillus flavus	26.36	2.00e-39	157.00
IUUC-Afu-008910	Aspergillus fumigatus	25.52	3.00e-38	154.00
IUUC-Ani-009321	Aspergillus nidulans	30.05	2.00e-40	160.00
IUUC-Ang-009592	Aspergillus niger	27.41	2.00e-41	164.00
IUUC-Aor-010220	Aspergillus oryzae	26.08	2.00e-39	157.00
IUUC-Ate-010317	Aspergillus terreus	25.33	5.00e-39	156.00
IUUC-Ame-010957	Astyanax mexicanus	53.28	0.00e+00	777.00
IUUC-Bgr-012057	Blumeria graminis	25.63	3.00e-37	150.00
IUUC-Bta-012473	Bos taurus	89.96	0.00e+00	1312.00
IUUC-Bdi-014203	Brachypodium distachyon	22.22	5.00e-43	169.00
IUUC-Bol-016163	Brassica oleracea	23.83	1.00e-47	184.00
IUUC-Bra-017482	Brassica rapa	23.65	3.00e-47	183.00
IUUC-Cfa-020549	Canis familiaris	93.98	0.00e+00	949.00
IUUC-Cpo-022088	Cavia porcellus	92.86	0.00e+00	1324.00
IUUC-Csa-023773	Chlorocebus sabaeus	96.21	0.00e+00	1384.00
IUUC-Cho-024302	Choloepus hoffmanni	90.51	0.00e+00	1075.00
IUUC-Cin-025384	Ciona intestinalis	34.15	8.00e-118	417.00
IUUC-Dre-027460	Danio rerio	52.40	0.00e+00	759.00
IUUC-Dno-029594	Dasypus novemcinctus	91.32	0.00e+00	1286.00
IUUC-Dor-030564	Dipodomys ordii	87.05	0.00e+00	803.00
IUUC-Dse-031179	Dothistroma septosporum	26.78	3.00e-39	156.00
IUUC-Dme-031603	Drosophila melanogaster	25.18	3.00e-58	219.00
IUUC-Ete-032655	Echinops telfairi	83.82	0.00e+00	1205.00
IUUC-Eca-033838	Equus caballus	93.15	0.00e+00	1350.00
IUUC-Eeu-034548	Erinaceus europaeus	88.78	0.00e+00	1278.00
IUUC-Fca-035715	Felis catus	93.29	0.00e+00	1353.00
IUUC-Fal-037394	Ficedula albicollis	58.12	0.00e+00	775.00
IUUC-Gmo-039235	Gadus morhua	47.38	0.00e+00	682.00
IUUC-Ggr-040043	Gaeumannomyces graminis	27.00	6.00e-32	132.00
IUUC-Gga-041172	Gallus gallus	60.76	0.00e+00	882.00
IUUC-Gac-042466	Gasterosteus aculeatus	51.75	0.00e+00	758.00
IUUC-Gma-044222	Glycine max	24.56	8.00e-42	165.00
IUUC-Ggo-045416	Gorilla gorilla	93.15	0.00e+00	1324.00
IUUC-Hsa-046115	Homo sapiens	96.70	0.00e+00	1351.00
IUUC-Hvu-047229	Hordeum vulgare	23.71	2.00e-43	171.00
IUUC-Itr-048015	Ictidomys tridecemlineatus	92.86	0.00e+00	1343.00
IUUC-Kpa-049370	Komagataella pastoris	20.91	3.00e-32	133.00
IUUC-Lch-050153	Latimeria chalumnae	58.66	0.00e+00	844.00
IUUC-Lpe-051220	Leersia perrieri	24.97	3.00e-48	186.00
IUUC-Loc-052617	Lepisosteus oculatus	53.60	0.00e+00	796.00
IUUC-Laf-053613	Loxodonta africana	90.09	0.00e+00	1301.00
IUUC-Mcc-055707	Macaca mulatta	96.11	0.00e+00	1349.00
IUUC-Meu-056800	Macropus eugenii	66.26	0.00e+00	798.00
IUUC-Mor-057245	Magnaporthe oryzae	26.95	1.00e-29	125.00
IUUC-Mpo-057446	Magnaporthe poae	27.77	2.00e-31	131.00
IUUC-Mtr-058748	Medicago truncatula	23.41	2.00e-43	170.00
IUUC-Mga-060018	Meleagris gallopavo	60.45	0.00e+00	853.00
IUUC-Mmr-061115	Microcebus murinus	94.17	0.00e+00	1338.00
IUUC-Mdo-062235	Monodelphis domestica	76.68	0.00e+00	1138.00
IUUC-Mmu-063158	Mus musculus	88.34	0.00e+00	1296.00
IUUC-Mac-065380	Musa acuminata	24.55	7.00e-54	205.00
IUUC-Mpu-065805	Mustela putorius furo	92.42	0.00e+00	1348.00
IUUC-Mlu-066951	Myotis lucifugus	91.25	0.00e+00	1323.00
IUUC-Nfi-068295	Neosartorya fischeri	26.36	8.00e-39	155.00
IUUC-Ncr-068880	Neurospora crassa	27.03	7.00e-39	155.00
IUUC-Nle-069657	Nomascus leucogenys	97.38	0.00e+00	1400.00
IUUC-Opr-070250	Ochotona princeps	90.09	0.00e+00	1298.00
IUUC-Ont-072642	Oreochromis niloticus	50.95	0.00e+00	715.00
IUUC-Ocu-074741	Oryctolagus cuniculus	92.86	0.00e+00	1342.00
IUUC-Oba-074974	Oryza barthii	24.97	7.00e-49	189.00
IUUC-Obr-076586	Oryza brachyantha	24.77	9.00e-43	168.00
IUUC-Ogl-077782	Oryza glaberrima	24.88	4.00e-51	196.00
IUUC-Ogu-078333	Oryza glumaepatula	24.97	1.00e-44	174.00
IUUC-Oin-079852	Oryza indica	24.64	4.00e-50	192.00
IUUC-Olo-080370	Oryza longistaminata	26.78	1.00e-40	161.00
IUUC-Ome-081442	Oryza meridionalis	24.43	7.00e-48	185.00
IUUC-Oni-082341	Oryza nivara	24.97	5.00e-45	176.00
IUUC-Opu-083824	Oryza punctata	24.42	1.00e-41	164.00
IUUC-Oru-084827	Oryza rufipogon	24.85	1.00e-48	187.00
IUUC-Osa-085742	Oryza sativa	24.64	2.00e-50	194.00
IUUC-Ola-086466	Oryzias latipes	52.89	0.00e+00	740.00
IUUC-Olu-087761	Ostreococcus lucimarinus	25.00	9.00e-52	198.00
IUUC-Oga-088721	Otolemur garnettii	83.88	0.00e+00	1176.00
IUUC-Oar-089532	Ovis aries	90.96	0.00e+00	1328.00
IUUC-Ptr-091604	Pan troglodytes	96.65	0.00e+00	1391.00
IUUC-Pan-092060	Papio anubis	96.39	0.00e+00	782.00
IUUC-Psi-093070	Pelodiscus sinensis	61.52	0.00e+00	866.00
IUUC-Pma-094201	Petromyzon marinus	48.97	3.00e-140	491.00
IUUC-Ppa-095599	Physcomitrella patens	28.81	4.00e-36	146.00
IUUC-Pfo-097207	Poecilia formosa	50.15	0.00e+00	718.00
IUUC-Pab-097746	Pongo abelii	96.50	0.00e+00	1386.00
IUUC-Pop-099669	Populus trichocarpa	24.18	5.00e-54	206.00
IUUC-Pca-100562	Procavia capensis	83.06	0.00e+00	947.00
IUUC-Ppe-101747	Prunus persica	23.33	9.00e-49	188.00
IUUC-Pva-103054	Pteropus vampyrus	92.57	0.00e+00	1350.00
IUUC-Pte-104064	Pyrenophora teres	25.96	4.00e-31	130.00
IUUC-Pyt-104595	Pyrenophora triticirepentis	26.94	1.00e-33	138.00
IUUC-Rno-105155	Rattus norvegicus	89.80	0.00e+00	1312.00
IUUC-Sce-106369	Saccharomyces cerevisiae	23.01	4.00e-43	169.00
IUUC-Sha-107149	Sarcophilus harrisii	75.51	0.00e+00	1121.00
IUUC-Sja-107777	Schizosaccharomyces japonicus	28.44	1.00e-63	238.00
IUUC-Spo-108372	Schizosaccharomyces pombe	28.88	8.00e-72	265.00
IUUC-Ssl-108650	Sclerotinia sclerotiorum	26.60	3.00e-42	167.00
IUUC-Smo-108851	Selaginella moellendorffii	23.82	9.00e-54	205.00
IUUC-Sit-110454	Setaria italica	24.85	9.00e-45	175.00
IUUC-Sly-111875	Solanum lycopersicum	24.52	3.00e-52	200.00
IUUC-Stu-112275	Solanum tuberosum	23.91	3.00e-46	180.00
IUUC-Sar-113254	Sorex araneus	75.91	0.00e+00	681.00
IUUC-Sbi-114624	Sorghum bicolor	24.53	2.00e-43	171.00
IUUC-Sre-114985	Sporisorium reilianum	20.49	6.00e-11	63.50
IUUC-Tgu-117407	Taeniopygia guttata	60.00	2.00e-147	515.00
IUUC-Tru-118733	Takifugu rubripes	47.24	0.00e+00	687.00
IUUC-Tsy-119213	Tarsius syrichta	83.25	0.00e+00	1060.00
IUUC-Tni-120894	Tetraodon nigroviridis	47.90	7.00e-98	350.00
IUUC-Tca-121606	Theobroma cacao	23.39	6.00e-45	176.00
IUUC-Tre-121958	Trichoderma reesei	26.62	3.00e-39	157.00
IUUC-Tvi-122290	Trichoderma virens	26.64	4.00e-40	160.00
IUUC-Tae-125538	Triticum aestivum	24.73	1.00e-45	178.00
IUUC-Tme-126995	Tuber melanosporum	26.18	7.00e-34	139.00
IUUC-Tbe-127605	Tupaia belangeri	74.29	5.00e-68	252.00
IUUC-Ttr-128720	Tursiops truncatus	91.11	0.00e+00	1316.00
IUUC-Uma-129564	Ustilago maydis	21.78	5.00e-16	80.50
IUUC-Vpa-130412	Vicugna pacos	94.31	1.00e-140	493.00
IUUC-Vvi-131256	Vitis vinifera	25.36	5.00e-50	192.00
IUUC-Xtr-131828	Xenopus tropicalis	54.78	0.00e+00	801.00
IUUC-Xma-133394	Xiphophorus maculatus	50.94	0.00e+00	726.00
IUUC-Yli-134565	Yarrowia lipolytica	30.97	1.00e-36	147.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence