iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111875

Ensembl Protein ID

Solyc12g088290.1.1

UniProt Accession

K4DGQ0; K4DGQ0_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc12g088290.1	Solyc12g088290.1.1	Solyc12g088290.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-11	43.0	208	231

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 8    claf.sd.tllvsGsdDgtikvWD 29
           ++ + sd +++ sGs Dg i++WD
   Q: 208  SVTWsSDaKRIYSGSSDGFIRCWD 231
           799**99***************** PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MLEVYRSSSV EWKPSPVVAL ATSVDDSQVA AAREDGSLEI WLVSPGSNGW HCQLIIHGNP 60
NSRVSSLVWY QSGSRKLPAG RLFSSSIDGS VYEWDLFDLT QKAVLDSIGV SIWQMAVEPC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTTGAAG TTTACAGAAG CAGTTCAGTT GAGTGGAAAC CGTCGCCGGT GGTAGCTTTA 60
GCTACTAGCG TCGATGATTC TCAGGTCGCC GCTGCTCGAG AGGATGGTTC TCTTGAGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sly:101254771

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001161	Aegilops tauschii	52.30	0.00e+00	748.00
IUUC-Aml-001310	Ailuropoda melanoleuca	24.85	4.00e-56	212.00
IUUC-Apl-003367	Anas platyrhynchos	32.94	5.00e-17	79.70
IUUC-Aca-004429	Anolis carolinensis	27.40	7.00e-29	120.00
IUUC-Ago-007843	Ashbya gossypii	23.40	5.00e-30	125.00
IUUC-Afl-008438	Aspergillus flavus	24.62	4.00e-28	119.00
IUUC-Ani-009321	Aspergillus nidulans	28.27	7.00e-29	122.00
IUUC-Aor-010220	Aspergillus oryzae	24.62	3.00e-28	119.00
IUUC-Ame-010957	Astyanax mexicanus	25.21	2.00e-49	190.00
IUUC-Bgr-012057	Blumeria graminis	25.04	9.00e-35	141.00
IUUC-Bta-012473	Bos taurus	26.02	4.00e-53	202.00
IUUC-Bdi-014203	Brachypodium distachyon	54.90	0.00e+00	830.00
IUUC-Cja-019942	Callithrix jacchus	24.52	2.00e-54	206.00
IUUC-Cfa-020549	Canis familiaris	25.72	8.00e-41	160.00
IUUC-Cpo-022088	Cavia porcellus	25.58	1.00e-53	203.00
IUUC-Csa-023773	Chlorocebus sabaeus	24.52	1.00e-54	207.00
IUUC-Cho-024302	Choloepus hoffmanni	25.99	2.00e-44	173.00
IUUC-Cin-025384	Ciona intestinalis	26.54	4.00e-50	191.00
IUUC-Dno-029594	Dasypus novemcinctus	24.81	1.00e-53	204.00
IUUC-Dor-030564	Dipodomys ordii	23.25	2.00e-21	97.10
IUUC-Dse-031179	Dothistroma septosporum	23.22	3.00e-28	120.00
IUUC-Dme-031603	Drosophila melanogaster	21.81	2.00e-18	87.00
IUUC-Ete-032655	Echinops telfairi	25.40	9.00e-39	154.00
IUUC-Eca-033838	Equus caballus	24.61	9.00e-54	204.00
IUUC-Eeu-034548	Erinaceus europaeus	24.00	4.00e-48	185.00
IUUC-Fca-035715	Felis catus	24.97	7.00e-57	214.00
IUUC-Fal-037394	Ficedula albicollis	25.95	1.00e-40	160.00
IUUC-Gmo-039235	Gadus morhua	22.84	3.00e-44	172.00
IUUC-Ggr-040043	Gaeumannomyces graminis	26.90	3.00e-25	109.00
IUUC-Gga-041172	Gallus gallus	25.00	1.00e-49	190.00
IUUC-Gac-042466	Gasterosteus aculeatus	25.69	2.00e-50	193.00
IUUC-Gma-044222	Glycine max	59.09	0.00e+00	888.00
IUUC-Ggo-045416	Gorilla gorilla	25.84	1.00e-42	167.00
IUUC-Hsa-046115	Homo sapiens	24.57	1.00e-52	200.00
IUUC-Hvu-047229	Hordeum vulgare	55.54	0.00e+00	698.00
IUUC-Itr-048015	Ictidomys tridecemlineatus	24.43	3.00e-54	206.00
IUUC-Kpa-049370	Komagataella pastoris	24.40	2.00e-15	77.00
IUUC-Lch-050153	Latimeria chalumnae	24.73	5.00e-50	191.00
IUUC-Lpe-051220	Leersia perrieri	54.91	0.00e+00	776.00
IUUC-Loc-052617	Lepisosteus oculatus	24.91	9.00e-53	201.00
IUUC-Laf-053613	Loxodonta africana	24.64	4.00e-53	202.00
IUUC-Mcc-055707	Macaca mulatta	24.69	2.00e-52	200.00
IUUC-Meu-056800	Macropus eugenii	25.96	2.00e-22	100.00
IUUC-Mor-057245	Magnaporthe oryzae	28.86	8.00e-28	118.00
IUUC-Mpo-057446	Magnaporthe poae	26.90	1.00e-25	111.00
IUUC-Mtr-058748	Medicago truncatula	52.15	0.00e+00	759.00
IUUC-Mga-060018	Meleagris gallopavo	24.65	2.00e-42	166.00
IUUC-Mmr-061115	Microcebus murinus	25.78	4.00e-52	198.00
IUUC-Mdo-062235	Monodelphis domestica	24.67	5.00e-53	201.00
IUUC-Mmu-063158	Mus musculus	25.15	9.00e-54	204.00
IUUC-Mpu-065805	Mustela putorius furo	24.88	7.00e-56	211.00
IUUC-Mlu-066951	Myotis lucifugus	24.21	1.00e-52	200.00
IUUC-Ncr-068880	Neurospora crassa	22.15	4.00e-23	102.00
IUUC-Nle-069657	Nomascus leucogenys	24.52	1.00e-54	206.00
IUUC-Opr-070250	Ochotona princeps	23.91	1.00e-48	187.00
IUUC-Ont-072642	Oreochromis niloticus	24.66	5.00e-44	171.00
IUUC-Ocu-074741	Oryctolagus cuniculus	24.64	1.00e-52	200.00
IUUC-Oba-074974	Oryza barthii	55.09	0.00e+00	801.00
IUUC-Obr-076586	Oryza brachyantha	57.34	0.00e+00	702.00
IUUC-Ogl-077782	Oryza glaberrima	56.36	0.00e+00	813.00
IUUC-Ogu-078333	Oryza glumaepatula	52.73	0.00e+00	779.00
IUUC-Oin-079852	Oryza indica	56.36	0.00e+00	813.00
IUUC-Olo-080370	Oryza longistaminata	56.49	0.00e+00	651.00
IUUC-Ome-081442	Oryza meridionalis	55.04	0.00e+00	800.00
IUUC-Oni-082341	Oryza nivara	52.85	0.00e+00	783.00
IUUC-Opu-083824	Oryza punctata	55.03	0.00e+00	796.00
IUUC-Oru-084827	Oryza rufipogon	54.86	0.00e+00	798.00
IUUC-Osa-085742	Oryza sativa	56.24	0.00e+00	810.00
IUUC-Ola-086466	Oryzias latipes	24.77	2.00e-44	173.00
IUUC-Olu-087761	Ostreococcus lucimarinus	25.96	1.00e-69	257.00
IUUC-Oga-088721	Otolemur garnettii	25.64	5.00e-43	168.00
IUUC-Oar-089532	Ovis aries	25.09	8.00e-53	201.00
IUUC-Ptr-091604	Pan troglodytes	24.52	1.00e-54	207.00
IUUC-Pan-092060	Papio anubis	26.11	5.00e-30	124.00
IUUC-Psi-093070	Pelodiscus sinensis	23.97	7.00e-43	167.00
IUUC-Ppa-095599	Physcomitrella patens	39.59	2.00e-165	575.00
IUUC-Pfo-097207	Poecilia formosa	23.81	8.00e-42	164.00
IUUC-Pab-097746	Pongo abelii	24.28	3.00e-54	205.00
IUUC-Pop-099991	Populus trichocarpa	67.07	0.00e+00	1071.00
IUUC-Pca-100562	Procavia capensis	25.82	3.00e-38	152.00
IUUC-Ppe-101747	Prunus persica	65.29	0.00e+00	1025.00
IUUC-Pva-103054	Pteropus vampyrus	24.85	6.00e-55	208.00
IUUC-Rno-105155	Rattus norvegicus	24.52	1.00e-51	196.00
IUUC-Sce-106369	Saccharomyces cerevisiae	22.82	7.00e-30	125.00
IUUC-Sha-107149	Sarcophilus harrisii	24.37	8.00e-51	194.00
IUUC-Sja-107777	Schizosaccharomyces japonicus	23.77	6.00e-45	174.00
IUUC-Spo-108372	Schizosaccharomyces pombe	23.21	8.00e-50	191.00
IUUC-Ssl-108650	Sclerotinia sclerotiorum	23.12	6.00e-29	122.00
IUUC-Smo-109670	Selaginella moellendorffii	38.84	9.00e-161	560.00
IUUC-Sit-110454	Setaria italica	55.92	0.00e+00	827.00
IUUC-Stu-112275	Solanum tuberosum	95.86	0.00e+00	1468.00
IUUC-Sar-113254	Sorex araneus	22.46	9.00e-16	78.20
IUUC-Sbi-114624	Sorghum bicolor	54.11	0.00e+00	714.00
IUUC-Sre-114985	Sporisorium reilianum	28.34	1.00e-10	61.60
IUUC-Tgu-117407	Taeniopygia guttata	27.52	1.00e-22	100.00
IUUC-Tru-118733	Takifugu rubripes	23.13	5.00e-40	158.00
IUUC-Tsy-119213	Tarsius syrichta	28.11	2.00e-25	109.00
IUUC-Tni-120894	Tetraodon nigroviridis	27.86	6.00e-29	120.00
IUUC-Tca-121606	Theobroma cacao	60.60	0.00e+00	950.00
IUUC-Tre-121958	Trichoderma reesei	24.28	1.00e-29	124.00
IUUC-Tvi-122290	Trichoderma virens	23.67	9.00e-27	115.00
IUUC-Tae-125441	Triticum aestivum	54.89	0.00e+00	828.00
IUUC-Tme-126995	Tuber melanosporum	27.25	8.00e-24	105.00
IUUC-Ttr-128720	Tursiops truncatus	25.27	2.00e-53	202.00
IUUC-Uma-129564	Ustilago maydis	33.64	9.00e-10	58.90
IUUC-Vpa-130412	Vicugna pacos	25.41	6.00e-24	105.00
IUUC-Vvi-131256	Vitis vinifera	66.39	0.00e+00	1037.00
IUUC-Xtr-131828	Xenopus tropicalis	22.30	4.00e-37	149.00
IUUC-Xma-133394	Xiphophorus maculatus	24.25	1.00e-43	170.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence