iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017501

Ensembl Protein ID

Bra018926.1-P

UniProt Accession

M4DQY3; M4DQY3_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra018926	Bra018926.1	Bra018926.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.00e-60	206.7	105	476
ULD/UDP/UBQ/UBQ_Other	1.10e-10	42.2	8	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefs.....gyeqqDa 92
           Gl NlgNtCYmNS++QcL ++pel+++l + +  + + ++ ++++  l+ + ++lf  l +++ +avsp++++ +l+k+ ++fs       +qqDa
   Q: 105  GLVNLGNTCYMNSTVQCLKSVPELKSALSN-YALTGRSNDVDQTSHMLTVATRELFGDL-DRSVNAVSPTQFWMTLRKKFPQFSqlqngMHMQQDA 198
           9*****************************.888878888899999*************.99**********************9999889***** PP
   S: 93   qEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslq 188
           +E++++ll +l+++l                       +  + ++ ++ ++ lF++ l+s++ c+e +++ss++e+ ++l+++++ + +     l+
   Q: 199  EECWTQLLYTLSQSL-----------------------KAPTSSEDSDAVKALFGVNLRSRVHCQESGEESSETESVYSLKCHISHEVN----HLH 267
           ***************.......................3467788899*************************************9986....688 PP
   S: 189  dcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts...............pe 269
           + L++  k e le      ++   +     k+  +++lP++L++++ Rf +++e++++ ki +kv++pleLd+   c++               + 
   Q: 268  EGLKHGLKGE-LE----KTSPALGRTALYLKESLIDSLPRYLTVQFVRFFWKRETNQKAKILRKVDYPLELDIFDLCSEelrkkleaprqklrdE- 357
           8887776665.44....478899999999**************************************************5555555555555550. PP
   S: 270  ekqke..................................................kkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskV 314
               e                                                  + +Y+L++v+ H+G s++sGHYva+vk+e+gkW+++dDs+ 
   Q: 358  ----EgkklglqpkssskdsdvkmtdaeasskesgesstvtqqeggssekgtlhmTGIYDLVSVLTHKGrSADSGHYVAWVKQESGKWIQYDDSHP 449
           ....055555555555555666666677777777777788888888888899999***************************************** PP
   S: 315  tevkeeevleetg....staYvlfYkr 337
           +  +ee++ + +g    + aY+ +Yk 
   Q: 450  SLQREEDITKLSGggdwHMAYIIMYKA 476
           **********988************97 PP

ULD/UDP/UBQ/UBQ_Other

   S: 7    sldgseltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllek 72
           + +    +++++p+ +  ++K ++++++g+ppe+q++++kG +L+dd ++++ g+kdg++++++ +
   Q: 8    WQKKVFEGIEIDPTLPPYVFKAQLYDLTGVPPERQKIMVKGGLLKDDADWSAIGVKDGQKLMMMGT 73
           55554556777777777899*******************************************976 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MLTVSVKWQK KVFEGIEIDP TLPPYVFKAQ LYDLTGVPPE RQKIMVKGGL LKDDADWSAI 60
GVKDGQKLMM MGTADEIVKA PEKAIVFAED LPEEEQATHL GYSAGLVNLG NTCYMNSTVQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTCACAG GTCCTCTCCT CTCTTCTCTT CTCTTCTCTT CTCTTAGTTA AGTAGATGCT 60
TTGAATCGAT TGTATTCGTA ATTTGCAATT AGATCTCGTT TTCATCTCCT AGAATTGAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00240--ubiquitin
PF00443--UCH

SMART

SM00213--UBQ

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002053	Ailuropoda melanoleuca	43.09	6.00e-112	397.00
IUUC-Bgr-012231	Blumeria graminis	36.59	1.00e-81	297.00
IUUC-Bta-012553	Bos taurus	43.00	9.00e-113	400.00
IUUC-Bol-016127	Brassica oleracea	99.58	0.00e+00	936.00
IUUC-Cel-018140	Caenorhabditis elegans	37.01	2.00e-81	296.00
IUUC-Cja-019516	Callithrix jacchus	42.74	4.00e-111	394.00
IUUC-Cfa-020808	Canis familiaris	43.00	8.00e-113	400.00
IUUC-Cpo-021688	Cavia porcellus	42.40	1.00e-110	392.00
IUUC-Csa-023429	Chlorocebus sabaeus	43.00	1.00e-111	396.00
IUUC-Cho-024347	Choloepus hoffmanni	43.00	5.00e-112	397.00
IUUC-Cgl-026757	Colletotrichum gloeosporioides	40.54	5.00e-65	241.00
IUUC-Cne-026963	Cryptococcus neoformans	36.62	2.00e-77	282.00
IUUC-Dno-029967	Dasypus novemcinctus	43.00	1.00e-111	396.00
IUUC-Dse-031466	Dothistroma septosporum	32.30	9.00e-72	264.00
IUUC-Ete-032351	Echinops telfairi	41.29	8.00e-103	367.00
IUUC-Fca-036210	Felis catus	43.20	4.00e-113	401.00
IUUC-Gac-041312	Gasterosteus aculeatus	41.08	7.00e-106	377.00
IUUC-Hsa-045706	Homo sapiens	43.00	1.00e-111	395.00
IUUC-Itr-048654	Ictidomys tridecemlineatus	42.80	3.00e-112	398.00
IUUC-Lch-050464	Latimeria chalumnae	41.99	2.00e-109	389.00
IUUC-Loc-052732	Lepisosteus oculatus	41.65	1.00e-109	390.00
IUUC-Laf-053822	Loxodonta africana	43.20	4.00e-113	401.00
IUUC-Mcc-055893	Macaca mulatta	43.00	1.00e-111	396.00
IUUC-Meu-056307	Macropus eugenii	39.44	6.00e-101	360.00
IUUC-Mla-058897	Melampsora laricipopulina	35.94	2.00e-81	295.00
IUUC-Mmr-060624	Microcebus murinus	43.06	1.00e-113	402.00
IUUC-Mdo-061809	Monodelphis domestica	42.63	2.00e-111	395.00
IUUC-Mmu-063869	Mus musculus	42.80	6.00e-112	397.00
IUUC-Mpu-066480	Mustela putorius furo	43.00	1.00e-112	399.00
IUUC-Opr-070712	Ochotona princeps	32.41	1.00e-56	214.00
IUUC-Oan-073635	Ornithorhynchus anatinus	39.81	3.00e-84	305.00
IUUC-Ocu-074926	Oryctolagus cuniculus	42.48	2.00e-110	392.00
IUUC-Oba-075633	Oryza barthii	67.43	2.00e-180	624.00
IUUC-Obr-076423	Oryza brachyantha	68.68	0.00e+00	634.00
IUUC-Ogl-077913	Oryza glaberrima	69.31	0.00e+00	639.00
IUUC-Ogu-078435	Oryza glumaepatula	67.43	2.00e-180	624.00
IUUC-Oin-080072	Oryza indica	67.51	3.00e-180	624.00
IUUC-Olo-080535	Oryza longistaminata	61.76	5.00e-163	566.00
IUUC-Ome-081309	Oryza meridionalis	67.43	2.00e-180	624.00
IUUC-Oni-083113	Oryza nivara	67.43	2.00e-180	624.00
IUUC-Opu-083168	Oryza punctata	65.34	5.00e-171	593.00
IUUC-Oru-084253	Oryza rufipogon	67.43	2.00e-180	624.00
IUUC-Osa-085554	Oryza sativa	69.52	0.00e+00	642.00
IUUC-Oga-088571	Otolemur garnettii	42.69	2.00e-111	395.00
IUUC-Oar-089526	Ovis aries	42.80	2.00e-112	399.00
IUUC-Ptr-091433	Pan troglodytes	43.00	1.00e-111	396.00
IUUC-Pan-091966	Papio anubis	43.00	1.00e-111	396.00
IUUC-Pab-098477	Pongo abelii	38.94	3.00e-81	295.00
IUUC-Pgr-103623	Puccinia graminis	42.77	2.00e-72	266.00
IUUC-Ptt-103767	Puccinia triticina	42.06	4.00e-68	252.00
IUUC-Rno-105351	Rattus norvegicus	43.00	6.00e-111	394.00
IUUC-Sha-107491	Sarcophilus harrisii	42.71	5.00e-111	394.00
IUUC-Spo-108174	Schizosaccharomyces pombe	38.51	2.00e-83	302.00
IUUC-Ssl-108659	Sclerotinia sclerotiorum	37.46	4.00e-86	311.00
IUUC-Sit-110361	Setaria italica	69.39	0.00e+00	653.00
IUUC-Sar-113355	Sorex araneus	35.02	3.00e-69	255.00
IUUC-Ssc-116273	Sus scrofa	43.00	7.00e-111	394.00
IUUC-Tsy-119076	Tarsius syrichta	39.56	5.00e-43	167.00
IUUC-Tre-121969	Trichoderma reesei	41.44	6.00e-67	248.00
IUUC-Tvi-122543	Trichoderma virens	36.17	7.00e-80	291.00
IUUC-Tur-126128	Triticum urartu	52.32	3.00e-77	281.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence