iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-021379

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02048432

Gene Name

SEH1L

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000006314.3	ENSCPOT00000006379.2	ENSCPOP00000005691.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-21	75.5	11	40

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWD 29
           H+d +++++f  ++ +++++s D ++kvWD
   Q: 11   HKDLIHDVSFdfHGLRMATCSSDQSVKVWD 40
           9*********8655779************* PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MFVARSIAAD HKDLIHDVSF DFHGLRMATC SSDQSVKVWD KSESGDWHCT ASWKTHSGSV 60
WRVTWAHPEF GQVLASCSFD RTAAVWEEIV GESNDKLRGQ SHWVKRTTLV DSRTSVTDVK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTCGTGG CGCGCAGCAT CGCGGCGGAC CATAAGGACC TCATCCACGA TGTCTCCTTC 60
GACTTTCATG GGCTGCGTAT GGCCACCTGC TCCAGCGACC AGAGCGTCAA GGTGGGGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0061700--C:GATOR2 complex
GO:0000776--C:kinetochore
GO:0031080--C:nuclear pore outer ring
GO:0051315--P:attachment of mitotic spindle microtubules to kinetochore
GO:0034629--P:cellular protein complex localization
GO:0034198--P:cellular response to amino acid starvation
GO:0002534--P:cytokine production involved in inflammatory response
GO:0050830--P:defense response to Gram-positive bacterium
GO:0006999--P:nuclear pore organization
GO:1904263--P:positive regulation of TORC1 signaling

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001926	Ailuropoda melanoleuca	97.50	5.00e-180	623.00
IUUC-Apl-003654	Anas platyrhynchos	92.50	2.00e-169	588.00
IUUC-Aca-004378	Anolis carolinensis	89.72	4.00e-166	576.00
IUUC-Ago-007816	Ashbya gossypii	33.73	1.00e-48	186.00
IUUC-Ame-011945	Astyanax mexicanus	83.84	5.00e-170	590.00
IUUC-Bta-013306	Bos taurus	97.22	0.00e+00	653.00
IUUC-Cel-018235	Caenorhabditis elegans	42.31	6.00e-75	274.00
IUUC-Cja-018849	Callithrix jacchus	96.65	0.00e+00	640.00
IUUC-Cfa-020841	Canis familiaris	88.79	3.00e-178	620.00
IUUC-Csa-023900	Chlorocebus sabaeus	96.92	0.00e+00	645.00
IUUC-Cho-024660	Choloepus hoffmanni	95.92	1.00e-177	615.00
IUUC-Cin-025471	Ciona intestinalis	54.47	5.00e-103	367.00
IUUC-Csv-026242	Ciona savignyi	58.96	1.00e-87	315.00
IUUC-Dre-028068	Danio rerio	82.17	4.00e-179	620.00
IUUC-Dno-029981	Dasypus novemcinctus	89.16	1.00e-170	592.00
IUUC-Dme-031763	Drosophila melanogaster	57.62	8.00e-111	393.00
IUUC-Ete-032243	Echinops telfairi	62.08	2.00e-117	415.00
IUUC-Eca-033425	Equus caballus	96.59	3.00e-166	577.00
IUUC-Eeu-035119	Erinaceus europaeus	77.56	7.00e-118	416.00
IUUC-Fca-036520	Felis catus	96.80	0.00e+00	671.00
IUUC-Fal-037234	Ficedula albicollis	92.81	4.00e-173	602.00
IUUC-Gmo-039013	Gadus morhua	85.47	3.00e-175	607.00
IUUC-Gga-041059	Gallus gallus	93.00	0.00e+00	662.00
IUUC-Gac-041337	Gasterosteus aculeatus	84.92	3.00e-170	590.00
IUUC-Ggo-044944	Gorilla gorilla	96.92	0.00e+00	695.00
IUUC-Hsa-046038	Homo sapiens	96.64	0.00e+00	694.00
IUUC-Itr-048858	Ictidomys tridecemlineatus	96.56	4.00e-164	570.00
IUUC-Kpa-049201	Komagataella pastoris	35.62	6.00e-49	187.00
IUUC-Lch-050466	Latimeria chalumnae	78.77	9.00e-177	612.00
IUUC-Loc-052773	Lepisosteus oculatus	74.88	2.00e-168	585.00
IUUC-Laf-053409	Loxodonta africana	96.11	0.00e+00	647.00
IUUC-Meu-055958	Macropus eugenii	70.09	3.00e-123	434.00
IUUC-Mga-059348	Meleagris gallopavo	92.28	1.00e-170	592.00
IUUC-Mmr-060977	Microcebus murinus	96.30	2.00e-132	464.00
IUUC-Mdo-061806	Monodelphis domestica	94.74	0.00e+00	681.00
IUUC-Mmu-064328	Mus musculus	95.83	0.00e+00	671.00
IUUC-Mpu-066873	Mustela putorius furo	97.19	7.00e-180	622.00
IUUC-Mlu-067563	Myotis lucifugus	89.72	0.00e+00	642.00
IUUC-Nle-068977	Nomascus leucogenys	97.01	0.00e+00	651.00
IUUC-Opr-070773	Ochotona princeps	64.29	1.00e-87	316.00
IUUC-Ont-072644	Oreochromis niloticus	85.20	9.00e-175	605.00
IUUC-Oan-073098	Ornithorhynchus anatinus	94.46	6.00e-166	576.00
IUUC-Ocu-073911	Oryctolagus cuniculus	97.20	0.00e+00	697.00
IUUC-Ola-087096	Oryzias latipes	83.75	9.00e-169	586.00
IUUC-Oga-088798	Otolemur garnettii	96.64	0.00e+00	696.00
IUUC-Oar-090298	Ovis aries	96.58	8.00e-167	582.00
IUUC-Ptr-091074	Pan troglodytes	96.67	0.00e+00	701.00
IUUC-Pan-092013	Papio anubis	97.24	4.00e-140	489.00
IUUC-Psi-093508	Pelodiscus sinensis	91.64	4.00e-171	593.00
IUUC-Pma-094288	Petromyzon marinus	83.81	3.00e-103	367.00
IUUC-Pfo-096384	Poecilia formosa	84.36	4.00e-173	600.00
IUUC-Pab-098629	Pongo abelii	96.94	0.00e+00	702.00
IUUC-Pca-100322	Procavia capensis	73.12	7.00e-112	397.00
IUUC-Pva-102861	Pteropus vampyrus	96.36	0.00e+00	642.00
IUUC-Rno-104895	Rattus norvegicus	93.66	0.00e+00	658.00
IUUC-Sce-106420	Saccharomyces cerevisiae	34.47	5.00e-53	201.00
IUUC-Sha-106829	Sarcophilus harrisii	89.26	0.00e+00	634.00
IUUC-Sja-107923	Schizosaccharomyces japonicus	39.42	1.00e-65	243.00
IUUC-Spo-108184	Schizosaccharomyces pombe	38.15	2.00e-63	236.00
IUUC-Smo-109282	Selaginella moellendorffii	32.59	2.00e-36	146.00
IUUC-Sar-113279	Sorex araneus	96.88	3.00e-164	571.00
IUUC-Ssc-115589	Sus scrofa	95.06	7.00e-178	615.00
IUUC-Tgu-117523	Taeniopygia guttata	92.72	0.00e+00	661.00
IUUC-Tru-117985	Takifugu rubripes	82.98	2.00e-155	544.00
IUUC-Tsy-118913	Tarsius syrichta	96.37	1.00e-166	578.00
IUUC-Tni-120670	Tetraodon nigroviridis	84.72	3.00e-174	603.00
IUUC-Tme-126885	Tuber melanosporum	36.09	1.00e-54	206.00
IUUC-Tbe-127344	Tupaia belangeri	77.31	1.00e-134	472.00
IUUC-Ttr-128347	Tursiops truncatus	97.81	2.00e-165	575.00
IUUC-Vpa-130656	Vicugna pacos	97.53	5.00e-158	550.00
IUUC-Xtr-132736	Xenopus tropicalis	89.14	0.00e+00	637.00
IUUC-Xma-133678	Xiphophorus maculatus	84.92	2.00e-174	605.00
IUUC-Yli-134659	Yarrowia lipolytica	39.38	1.00e-61	229.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence