iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__1443__AT3G13550.1	fgenesh2_kg.3__1443__AT3G13550.1	fgenesh2_kg.3__1443__AT3G13550.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	6.80e-42	143.2	40	174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvye 77
           R+++e++el+ dpp+ +sa+p+ + +l++w ++i+Gp++tpYegg+F l+i fp+dYPfkPPk+ f t+i+h+nv++
   Q: 40   RIQREMAELNVDPPPDCSAGPKGD-NLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDT 115
           99**********************.9*************************************************** PP
   S: 78   nGkvClsilkeeekWspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           +G++ ++il+  + Wspal++++vl +i s++ +p+p sp+   +a+l+ ++r ++++ ++
   Q: 116  AGNLSVDILR--DSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDRDKHDEVAK 174
           *********9..******************************************9998876 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MMTPGGSGRL RPLPTPMYAG YSGTASSWVA KTSVSASGKR IQREMAELNV DPPPDCSAGP 60
KGDNLYHWIA TIIGPSGTPY EGGIFFLDII FPSDYPFKPP KLVFKTRIYH CNVDTAGNLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGAATCGG AAGAGGACAA CGACGGGAGA TGATGACACC TGGCGGAAGC GGAAGATTAA 60
GGCCGTTACC GACGCCGATG TACGCCGGAT ATTCTGGAAC GGCGTCGTCT TGGGTAGCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000608--UBQ-conjugat_E2
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005634--C:nucleus
GO:0010099--P:regulation of photomorphogenesis

KEGG

aly:ARALYDRAFT_478742

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000463	Aegilops tauschii	69.44	6.00e-61	228.00
IUUC-Ath-006621	Arabidopsis thaliana	97.25	2.00e-103	367.00
IUUC-Bdi-014747	Brachypodium distachyon	69.44	6.00e-60	222.00
IUUC-Bol-015173	Brassica oleracea	92.31	4.00e-100	355.00
IUUC-Bra-017423	Brassica rapa	92.86	5.00e-100	355.00
IUUC-Cre-022791	Chlamydomonas reinhardtii	60.26	5.00e-57	212.00
IUUC-Cin-025161	Ciona intestinalis	52.56	1.00e-49	188.00
IUUC-Gma-043921	Glycine max	73.79	1.00e-61	228.00
IUUC-Ggo-045068	Gorilla gorilla	58.45	9.00e-51	192.00
IUUC-Lpe-051111	Leersia perrieri	68.57	5.00e-60	224.00
IUUC-Mtr-058214	Medicago truncatula	67.96	2.00e-70	257.00
IUUC-Mac-065206	Musa acuminata	71.94	9.00e-59	218.00
IUUC-Oba-075804	Oryza barthii	74.02	3.00e-58	218.00
IUUC-Obr-076634	Oryza brachyantha	58.33	1.00e-53	201.00
IUUC-Ogl-077145	Oryza glaberrima	71.53	7.00e-62	229.00
IUUC-Oin-080066	Oryza indica	60.59	6.00e-58	216.00
IUUC-Opu-083227	Oryza punctata	71.43	3.00e-61	228.00
IUUC-Osa-086202	Oryza sativa	70.83	3.00e-61	227.00
IUUC-Olu-087783	Ostreococcus lucimarinus	58.99	2.00e-53	200.00
IUUC-Ptr-091596	Pan troglodytes	57.75	4.00e-50	190.00
IUUC-Ppa-095160	Physcomitrella patens	59.33	2.00e-56	210.00
IUUC-Pop-099024	Populus trichocarpa	82.64	9.00e-71	258.00
IUUC-Ppe-101314	Prunus persica	77.24	7.00e-68	248.00
IUUC-Smo-108957	Selaginella moellendorffii	62.34	6.00e-58	215.00
IUUC-Sit-109845	Setaria italica	68.06	2.00e-58	217.00
IUUC-Sly-111200	Solanum lycopersicum	73.61	3.00e-64	236.00
IUUC-Sbi-114236	Sorghum bicolor	65.97	1.00e-57	214.00
IUUC-Tca-121777	Theobroma cacao	82.07	8.00e-70	255.00
IUUC-Tae-123791	Triticum aestivum	69.44	2.00e-59	221.00
IUUC-Vvi-131190	Vitis vinifera	81.29	1.00e-74	271.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence