iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cre-023003

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS496114

Gene Name

CHLREDRAFT_166194

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_166194	EDP06632	EDP06632

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-17	61.4	143	181

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH    +c+ + ++ ++l++GsdD+ +k+W+  tg ll+
   Q: 143  GHRVAAYCCMYdNTgRRLCTGSDDCLVKIWSAETGMLLR 181
           7888899**99977799**************99998887 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MADPDAEVLF LIWRSLASGP LKNVAKALEE EAAKHGLLPT RVDIAGEVRP VEFEVHARVQ 60
SHVGPESLRR LLDKFVQQNA EALPGPGVKV VSLTAPGKHG LLGQPEPPLP AWWRRPYCQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGACC CAGACGCAGA GGTGCTATTC CTCATATGGA GGTCCCTGGC GTCCGGGCCG 60
CTGAAGAATG TCGCTAAAGC ACTTGAGGAG GAGGCCGCAA AGCATGGACT GCTGCCGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0007010--P:cytoskeleton organization
GO:0008360--P:regulation of cell shape
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

KEGG

cre:CHLREDRAFT_166194

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001113	Aegilops tauschii	33.56	4.00e-28	119.00
IUUC-Aml-001881	Ailuropoda melanoleuca	33.45	7.00e-31	128.00
IUUC-Atr-002600	Amborella trichopoda	31.73	1.00e-25	110.00
IUUC-Apl-003700	Anas platyrhynchos	51.00	1.00e-24	108.00
IUUC-Aca-004474	Anolis carolinensis	35.14	2.00e-35	143.00
IUUC-Aly-006406	Arabidopsis lyrata	31.49	8.00e-25	108.00
IUUC-Ath-006801	Arabidopsis thaliana	31.49	4.00e-25	109.00
IUUC-Ame-010718	Astyanax mexicanus	35.77	1.00e-34	141.00
IUUC-Bta-013217	Bos taurus	34.15	2.00e-31	130.00
IUUC-Bdi-014797	Brachypodium distachyon	30.05	1.00e-18	87.80
IUUC-Bol-015737	Brassica oleracea	31.00	2.00e-30	127.00
IUUC-Bra-017961	Brassica rapa	31.31	2.00e-30	127.00
IUUC-Cja-018868	Callithrix jacchus	31.41	1.00e-31	131.00
IUUC-Cfa-021037	Canis familiaris	34.15	2.00e-31	130.00
IUUC-Cpo-021934	Cavia porcellus	34.49	8.00e-32	132.00
IUUC-Csa-023166	Chlorocebus sabaeus	33.79	9.00e-31	128.00
IUUC-Cho-024690	Choloepus hoffmanni	30.19	3.00e-23	103.00
IUUC-Cin-025702	Ciona intestinalis	30.86	9.00e-21	92.00
IUUC-Csv-025813	Ciona savignyi	50.00	1.00e-24	106.00
IUUC-Dre-028029	Danio rerio	33.21	3.00e-33	136.00
IUUC-Dno-030048	Dasypus novemcinctus	31.12	2.00e-25	110.00
IUUC-Dor-030195	Dipodomys ordii	51.00	1.00e-24	107.00
IUUC-Dme-031752	Drosophila melanogaster	33.79	2.00e-33	137.00
IUUC-Ete-032717	Echinops telfairi	32.86	1.00e-29	124.00
IUUC-Eca-034349	Equus caballus	46.56	3.00e-26	113.00
IUUC-Eeu-034871	Erinaceus europaeus	32.08	3.00e-28	119.00
IUUC-Fca-036099	Felis catus	33.45	8.00e-31	128.00
IUUC-Fal-037307	Ficedula albicollis	33.68	7.00e-29	122.00
IUUC-Gga-040865	Gallus gallus	34.26	2.00e-29	124.00
IUUC-Gac-042435	Gasterosteus aculeatus	31.72	4.00e-24	105.00
IUUC-Gma-043973	Glycine max	33.22	5.00e-29	122.00
IUUC-Ggo-045500	Gorilla gorilla	34.62	2.00e-31	130.00
IUUC-Hsa-046350	Homo sapiens	34.15	2.00e-31	130.00
IUUC-Hvu-047706	Hordeum vulgare	49.59	1.00e-22	98.60
IUUC-Lch-049662	Latimeria chalumnae	35.06	3.00e-32	133.00
IUUC-Lpe-051619	Leersia perrieri	32.23	5.00e-26	112.00
IUUC-Loc-052853	Lepisosteus oculatus	36.57	1.00e-31	131.00
IUUC-Laf-053848	Loxodonta africana	34.39	3.00e-31	130.00
IUUC-Mcc-054638	Macaca mulatta	34.15	2.00e-31	130.00
IUUC-Meu-056739	Macropus eugenii	46.56	5.00e-26	112.00
IUUC-Mtr-057637	Medicago truncatula	34.30	4.00e-27	116.00
IUUC-Mga-060165	Meleagris gallopavo	33.45	3.00e-29	123.00
IUUC-Mmr-061227	Microcebus murinus	34.15	2.00e-31	130.00
IUUC-Mdo-062074	Monodelphis domestica	33.80	7.00e-31	129.00
IUUC-Mmu-064075	Mus musculus	35.56	3.00e-31	130.00
IUUC-Mac-065343	Musa acuminata	33.23	2.00e-29	123.00
IUUC-Mpu-066628	Mustela putorius furo	33.78	9.00e-33	134.00
IUUC-Mlu-068082	Myotis lucifugus	32.17	1.00e-30	127.00
IUUC-Nle-069402	Nomascus leucogenys	34.62	2.00e-31	130.00
IUUC-Opr-070971	Ochotona princeps	51.32	7.00e-16	78.60
IUUC-Ont-072221	Oreochromis niloticus	33.94	2.00e-34	140.00
IUUC-Oan-072954	Ornithorhynchus anatinus	34.57	3.00e-34	140.00
IUUC-Ocu-074456	Oryctolagus cuniculus	47.33	2.00e-26	114.00
IUUC-Oba-075709	Oryza barthii	32.79	8.00e-27	114.00
IUUC-Obr-076619	Oryza brachyantha	32.57	1.00e-27	117.00
IUUC-Ogl-077493	Oryza glaberrima	32.21	1.00e-18	87.80
IUUC-Ogu-078641	Oryza glumaepatula	30.80	1.00e-17	84.70
IUUC-Oin-079669	Oryza indica	30.80	3.00e-18	85.50
IUUC-Olo-080755	Oryza longistaminata	31.20	1.00e-17	84.70
IUUC-Oni-082991	Oryza nivara	31.20	9.00e-18	84.70
IUUC-Opu-083233	Oryza punctata	33.11	2.00e-27	116.00
IUUC-Oru-085195	Oryza rufipogon	32.79	9.00e-27	114.00
IUUC-Ola-086648	Oryzias latipes	33.58	1.00e-31	131.00
IUUC-Olu-087745	Ostreococcus lucimarinus	36.05	2.00e-28	120.00
IUUC-Oga-089053	Otolemur garnettii	33.45	6.00e-31	128.00
IUUC-Oar-090042	Ovis aries	33.45	1.00e-30	127.00
IUUC-Ptr-091213	Pan troglodytes	34.15	2.00e-31	130.00
IUUC-Pan-092444	Papio anubis	34.15	2.00e-31	130.00
IUUC-Psi-093271	Pelodiscus sinensis	49.57	2.00e-26	114.00
IUUC-Pma-094427	Petromyzon marinus	36.94	4.00e-34	136.00
IUUC-Ppa-095793	Physcomitrella patens	33.97	9.00e-33	135.00
IUUC-Pfo-097318	Poecilia formosa	37.36	7.00e-32	131.00
IUUC-Pab-097672	Pongo abelii	35.09	2.00e-33	137.00
IUUC-Pop-099672	Populus trichocarpa	33.77	5.00e-28	119.00
IUUC-Pca-101128	Procavia capensis	51.00	9.00e-25	108.00
IUUC-Ppe-101283	Prunus persica	34.64	1.00e-30	127.00
IUUC-Pva-102512	Pteropus vampyrus	31.40	5.00e-31	129.00
IUUC-Rno-105687	Rattus norvegicus	35.56	9.00e-31	128.00
IUUC-Sha-106680	Sarcophilus harrisii	33.22	1.00e-30	127.00
IUUC-Sit-110017	Setaria italica	32.80	5.00e-19	89.00
IUUC-Sly-111859	Solanum lycopersicum	31.49	5.00e-31	127.00
IUUC-Sar-113004	Sorex araneus	32.87	2.00e-30	127.00
IUUC-Sbi-114195	Sorghum bicolor	34.75	3.00e-30	125.00
IUUC-Ssc-115628	Sus scrofa	34.57	9.00e-31	125.00
IUUC-Tgu-116513	Taeniopygia guttata	33.57	5.00e-29	122.00
IUUC-Tru-117824	Takifugu rubripes	36.80	3.00e-34	139.00
IUUC-Tsy-118921	Tarsius syrichta	33.60	5.00e-27	116.00
IUUC-Tni-120656	Tetraodon nigroviridis	36.13	1.00e-33	137.00
IUUC-Tca-121615	Theobroma cacao	30.91	2.00e-25	110.00
IUUC-Tae-125478	Triticum aestivum	34.31	5.00e-29	122.00
IUUC-Tur-126809	Triticum urartu	34.31	6.00e-29	122.00
IUUC-Tbe-127479	Tupaia belangeri	51.00	1.00e-24	107.00
IUUC-Ttr-128561	Tursiops truncatus	34.15	2.00e-31	130.00
IUUC-Vpa-130160	Vicugna pacos	51.00	1.00e-24	108.00
IUUC-Vvi-131332	Vitis vinifera	34.53	2.00e-29	123.00
IUUC-Xtr-132565	Xenopus tropicalis	32.95	3.00e-33	133.00
IUUC-Xma-133633	Xiphophorus maculatus	36.98	6.00e-32	131.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence