iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d045472	Zm00001d045472_T001	Zm00001d045472_T001
Zm00001d045472	Zm00001d045472_T002	Zm00001d045472_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-18	66.6	349	379

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H++s +++ f sd +l++s+s D t+ +WDl
   Q: 349  HSASCNAVTFsSDcKLMASCSADTTVALWDL 379
           99999******999****************7 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MAGLERPRRR PPPDPVAVLR GHRAAVNDAC FHPSLPLLFS GAADGELRAW DTASHRTASS 60
VWFDTSALVL SAAMSDLVLC QIWAHAGSVG VYSVAAGAGL GNKIISQGRD GTCKCWAIEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACCCTGGT TCTACCACGC GACTAACTGA GCCGCCGACG CCAGGCCTCC ACGCCGCATC 60
CGCGTGACCG CGCCTCCGAG CTCCATAGCC CCGGGCCGCC GGCGCCGGGC CATCGTGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000899	Aegilops tauschii	65.52	4.00e-136	477.00
IUUC-Aml-001556	Ailuropoda melanoleuca	27.15	2.00e-23	102.00
IUUC-Atr-002691	Amborella trichopoda	45.78	9.00e-98	349.00
IUUC-Apl-003227	Anas platyrhynchos	25.72	1.00e-24	106.00
IUUC-Aly-006168	Arabidopsis lyrata	49.87	2.00e-103	368.00
IUUC-Ath-007145	Arabidopsis thaliana	47.63	7.00e-99	353.00
IUUC-Acl-008132	Aspergillus clavatus	44.44	2.00e-09	56.60
IUUC-Afl-008655	Aspergillus flavus	23.81	1.00e-14	73.90
IUUC-Ang-009760	Aspergillus niger	25.26	2.00e-11	63.50
IUUC-Bgr-012119	Blumeria graminis	24.16	2.00e-15	76.30
IUUC-Bta-012556	Bos taurus	26.39	7.00e-23	100.00
IUUC-Bdi-014151	Brachypodium distachyon	67.48	1.00e-144	505.00
IUUC-Bol-016319	Brassica oleracea	47.76	1.00e-100	359.00
IUUC-Bra-016675	Brassica rapa	48.51	4.00e-102	364.00
IUUC-Cja-019523	Callithrix jacchus	25.86	3.00e-23	102.00
IUUC-Cfa-021217	Canis familiaris	28.22	3.00e-23	102.00
IUUC-Cpo-021506	Cavia porcellus	33.00	3.00e-20	91.70
IUUC-Csa-023674	Chlorocebus sabaeus	26.67	2.00e-24	105.00
IUUC-Cgl-026723	Colletotrichum gloeosporioides	22.89	8.00e-12	64.30
IUUC-Dre-027592	Danio rerio	24.61	8.00e-21	93.60
IUUC-Dno-029880	Dasypus novemcinctus	32.84	8.00e-22	97.40
IUUC-Dor-030266	Dipodomys ordii	34.07	3.00e-19	88.20
IUUC-Dse-031212	Dothistroma septosporum	25.84	2.00e-15	76.30
IUUC-Dme-032209	Drosophila melanogaster	24.20	8.00e-21	93.60
IUUC-Eca-033371	Equus caballus	28.87	1.00e-25	109.00
IUUC-Fca-035558	Felis catus	25.07	2.00e-23	102.00
IUUC-Fal-036794	Ficedula albicollis	26.51	3.00e-29	122.00
IUUC-Gmo-038742	Gadus morhua	25.00	3.00e-19	88.60
IUUC-Gga-040868	Gallus gallus	26.44	2.00e-26	112.00
IUUC-Gac-041646	Gasterosteus aculeatus	24.15	2.00e-22	99.40
IUUC-Gma-044269	Glycine max	48.88	6.00e-103	367.00
IUUC-Ggo-044553	Gorilla gorilla	26.74	3.00e-24	105.00
IUUC-Hsa-046217	Homo sapiens	26.74	4.00e-24	104.00
IUUC-Hvu-047647	Hordeum vulgare	67.16	4.00e-147	513.00
IUUC-Itr-048649	Ictidomys tridecemlineatus	27.44	2.00e-25	109.00
IUUC-Lch-050134	Latimeria chalumnae	27.30	1.00e-23	103.00
IUUC-Lpe-051524	Leersia perrieri	58.25	6.00e-111	393.00
IUUC-Loc-051757	Lepisosteus oculatus	39.81	7.00e-18	84.30
IUUC-Laf-053733	Loxodonta africana	26.17	1.00e-19	90.10
IUUC-Mcc-055477	Macaca mulatta	24.78	6.00e-16	77.40
IUUC-Meu-056758	Macropus eugenii	45.59	1.00e-12	66.60
IUUC-Mor-057289	Magnaporthe oryzae	47.46	7.00e-10	58.20
IUUC-Mtr-058616	Medicago truncatula	47.73	6.00e-97	347.00
IUUC-Mmr-061675	Microcebus murinus	26.49	1.00e-22	100.00
IUUC-Mdo-062782	Monodelphis domestica	31.90	1.00e-22	99.80
IUUC-Mmu-064058	Mus musculus	27.75	2.00e-28	119.00
IUUC-Mac-065262	Musa acuminata	52.35	3.00e-116	411.00
IUUC-Mpu-066633	Mustela putorius furo	33.33	6.00e-19	88.20
IUUC-Mlu-067333	Myotis lucifugus	28.22	4.00e-22	98.20
IUUC-Nfi-068581	Neosartorya fischeri	36.27	4.00e-09	55.50
IUUC-Nle-069485	Nomascus leucogenys	27.27	3.00e-23	101.00
IUUC-Oan-073361	Ornithorhynchus anatinus	36.97	2.00e-17	82.00
IUUC-Ocu-073923	Oryctolagus cuniculus	26.65	2.00e-19	90.10
IUUC-Oba-075743	Oryza barthii	57.08	1.00e-125	442.00
IUUC-Obr-076879	Oryza brachyantha	62.72	2.00e-134	471.00
IUUC-Ogl-077813	Oryza glaberrima	64.52	5.00e-138	483.00
IUUC-Ogu-078196	Oryza glumaepatula	57.08	1.00e-125	442.00
IUUC-Oin-080131	Oryza indica	64.76	1.00e-138	485.00
IUUC-Olo-080613	Oryza longistaminata	53.05	7.00e-72	263.00
IUUC-Ome-081912	Oryza meridionalis	59.24	2.00e-127	448.00
IUUC-Oni-082813	Oryza nivara	57.58	1.00e-122	432.00
IUUC-Opu-083663	Oryza punctata	64.63	6.00e-142	496.00
IUUC-Oru-085102	Oryza rufipogon	59.48	7.00e-128	449.00
IUUC-Osa-086204	Oryza sativa	64.76	1.00e-138	485.00
IUUC-Ola-086541	Oryzias latipes	24.44	2.00e-19	89.40
IUUC-Olu-087776	Ostreococcus lucimarinus	44.16	1.00e-14	72.00
IUUC-Oga-088039	Otolemur garnettii	27.88	4.00e-26	111.00
IUUC-Oar-089515	Ovis aries	42.98	2.00e-19	89.00
IUUC-Ptr-091291	Pan troglodytes	26.74	3.00e-24	105.00
IUUC-Pan-092644	Papio anubis	26.40	8.00e-24	103.00
IUUC-Psi-093646	Pelodiscus sinensis	26.99	1.00e-24	106.00
IUUC-Ppa-095698	Physcomitrella patens	35.70	1.00e-62	233.00
IUUC-Pfo-096601	Poecilia formosa	25.53	9.00e-22	97.10
IUUC-Pab-098407	Pongo abelii	26.74	4.00e-24	104.00
IUUC-Pop-099193	Populus trichocarpa	49.01	1.00e-107	382.00
IUUC-Pca-100366	Procavia capensis	24.15	3.00e-22	98.60
IUUC-Ppe-101608	Prunus persica	48.64	2.00e-106	378.00
IUUC-Pva-102775	Pteropus vampyrus	28.03	2.00e-22	99.40
IUUC-Rno-105626	Rattus norvegicus	26.91	3.00e-26	111.00
IUUC-Sha-106539	Sarcophilus harrisii	27.83	3.00e-22	99.00
IUUC-Sja-107694	Schizosaccharomyces japonicus	24.87	2.00e-15	76.30
IUUC-Spo-108326	Schizosaccharomyces pombe	40.35	2.00e-13	69.30
IUUC-Smo-108756	Selaginella moellendorffii	39.10	1.00e-72	265.00
IUUC-Sit-109771	Setaria italica	75.61	3.00e-168	583.00
IUUC-Sly-111138	Solanum lycopersicum	47.36	2.00e-100	358.00
IUUC-Stu-112425	Solanum tuberosum	49.12	5.00e-102	363.00
IUUC-Sbi-114356	Sorghum bicolor	81.75	0.00e+00	631.00
IUUC-Ssc-115256	Sus scrofa	25.46	7.00e-22	97.10
IUUC-Tgu-116774	Taeniopygia guttata	27.33	1.00e-22	99.40
IUUC-Tru-117900	Takifugu rubripes	36.11	1.00e-16	80.10
IUUC-Tsy-119540	Tarsius syrichta	50.65	5.00e-18	84.30
IUUC-Tni-120252	Tetraodon nigroviridis	25.00	2.00e-23	102.00
IUUC-Tca-121717	Theobroma cacao	46.70	4.00e-105	374.00
IUUC-Tae-123804	Triticum aestivum	66.17	2.00e-148	518.00
IUUC-Ttr-129240	Tursiops truncatus	43.81	6.00e-21	94.40
IUUC-Vda-129913	Verticillium dahliae	23.23	7.00e-09	54.30
IUUC-Vvi-131718	Vitis vinifera	49.50	9.00e-107	379.00
IUUC-Xtr-132109	Xenopus tropicalis	26.95	3.00e-27	115.00
IUUC-Xma-133366	Xiphophorus maculatus	26.58	8.00e-24	103.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence