iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095295

Ensembl Protein ID

PP1S241_91V6.1

UniProt Accession

A9TJ18; A9TJ18_PHYPA

Genbank Protein ID

EDQ56635.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545130

Gene Name

PHYPADRAFT_146293

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S241_91V6	PP1S241_91V6.1	PP1S241_91V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.90e-07	30.6	2401	2431

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           +H+d vt+l+   d   +v+Gs+D t++vWD
   Q: 2401 QHKDVVTSLSVaVDgSVVVTGSRDTTVMVWD 2431
           59*******999665899************* PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MEALQQCSFL PRIVTMLAKS LHRVLQLAPE PTIKSLRTLN ATSIITHVME QQKKASIEAL 60
KEDSAERNEN SRLEDSCSAD LWHEAMDALC TVFSSYLAAS EEAVVDASRN SRAIDALFNL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGCCC TTCAGCAGTG TTCGTTTCTT CCTAGGATTG TGACTATGCT GGCAAAGAGT 60
CTGCACCGGG TACTTCAGCT AGCCCCAGAA CCTACAATAA AATCATTAAG GACTTTGAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR031570--DUF4704
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF15787--DUF4704
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

KEGG

ppp:PHYPADRAFT_146293

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000860	Aegilops tauschii	43.17	0.00e+00	1408.00
IUUC-Aml-001205	Ailuropoda melanoleuca	39.10	2.00e-142	500.00
IUUC-Atr-002998	Amborella trichopoda	47.87	0.00e+00	2397.00
IUUC-Apl-004130	Anas platyrhynchos	34.07	6.00e-146	512.00
IUUC-Aca-005335	Anolis carolinensis	39.56	8.00e-145	508.00
IUUC-Aly-005407	Arabidopsis lyrata	52.38	0.00e+00	1357.00
IUUC-Ath-007674	Arabidopsis thaliana	45.02	0.00e+00	2211.00
IUUC-Ame-010605	Astyanax mexicanus	39.36	4.00e-133	469.00
IUUC-Bta-013018	Bos taurus	34.94	2.00e-150	527.00
IUUC-Bdi-014244	Brachypodium distachyon	47.22	0.00e+00	1280.00
IUUC-Bol-015261	Brassica oleracea	44.69	0.00e+00	2140.00
IUUC-Bra-016877	Brassica rapa	45.50	0.00e+00	2157.00
IUUC-Cja-018744	Callithrix jacchus	38.26	3.00e-144	504.00
IUUC-Cfa-021045	Canis familiaris	39.07	2.00e-142	500.00
IUUC-Cpo-021636	Cavia porcellus	38.28	7.00e-147	515.00
IUUC-Csa-023251	Chlorocebus sabaeus	38.95	2.00e-141	497.00
IUUC-Cho-024721	Choloepus hoffmanni	58.55	5.00e-96	345.00
IUUC-Csv-026337	Ciona savignyi	30.15	2.00e-115	409.00
IUUC-Dre-027616	Danio rerio	39.66	4.00e-140	493.00
IUUC-Dno-029573	Dasypus novemcinctus	39.08	6.00e-142	499.00
IUUC-Dme-031593	Drosophila melanogaster	38.30	4.00e-130	459.00
IUUC-Ete-032481	Echinops telfairi	36.92	1.00e-124	442.00
IUUC-Eca-033893	Equus caballus	37.92	4.00e-148	520.00
IUUC-Fca-036558	Felis catus	39.27	2.00e-132	468.00
IUUC-Fal-037518	Ficedula albicollis	34.84	2.00e-148	521.00
IUUC-Gmo-039388	Gadus morhua	34.06	5.00e-136	479.00
IUUC-Gga-041228	Gallus gallus	34.93	1.00e-149	524.00
IUUC-Gac-042518	Gasterosteus aculeatus	39.87	2.00e-141	497.00
IUUC-Gma-042772	Glycine max	45.68	0.00e+00	2253.00
IUUC-Ggo-045255	Gorilla gorilla	38.58	1.00e-130	460.00
IUUC-Hsa-046316	Homo sapiens	39.00	2.00e-141	497.00
IUUC-Hvu-047772	Hordeum vulgare	43.63	0.00e+00	1300.00
IUUC-Itr-048852	Ictidomys tridecemlineatus	37.79	8.00e-147	515.00
IUUC-Lch-049963	Latimeria chalumnae	34.48	3.00e-150	526.00
IUUC-Lpe-050958	Leersia perrieri	42.04	0.00e+00	1583.00
IUUC-Loc-052771	Lepisosteus oculatus	38.83	3.00e-149	523.00
IUUC-Laf-053724	Loxodonta africana	37.97	3.00e-148	520.00
IUUC-Mcc-054720	Macaca mulatta	39.08	1.00e-141	498.00
IUUC-Meu-056286	Macropus eugenii	38.53	1.00e-132	468.00
IUUC-Mtr-058372	Medicago truncatula	46.09	0.00e+00	2198.00
IUUC-Mga-060173	Meleagris gallopavo	39.82	1.00e-143	504.00
IUUC-Mmr-061257	Microcebus murinus	34.48	8.00e-149	521.00
IUUC-Mdo-062583	Monodelphis domestica	34.43	2.00e-146	513.00
IUUC-Mmu-063641	Mus musculus	39.10	3.00e-142	500.00
IUUC-Mac-064991	Musa acuminata	44.90	0.00e+00	2086.00
IUUC-Mpu-066074	Mustela putorius furo	37.92	8.00e-149	522.00
IUUC-Mlu-067759	Myotis lucifugus	33.52	4.00e-146	513.00
IUUC-Nle-069582	Nomascus leucogenys	34.32	4.00e-145	509.00
IUUC-Opr-070275	Ochotona princeps	39.06	4.00e-122	432.00
IUUC-Ont-071396	Oreochromis niloticus	39.56	5.00e-142	499.00
IUUC-Oan-073413	Ornithorhynchus anatinus	38.20	3.00e-144	504.00
IUUC-Ocu-074036	Oryctolagus cuniculus	39.10	4.00e-142	499.00
IUUC-Oba-075361	Oryza barthii	40.97	0.00e+00	1774.00
IUUC-Obr-076854	Oryza brachyantha	44.27	0.00e+00	2047.00
IUUC-Ogl-077620	Oryza glaberrima	51.95	0.00e+00	1055.00
IUUC-Ogu-078751	Oryza glumaepatula	42.28	0.00e+00	1266.00
IUUC-Oin-079746	Oryza indica	40.22	0.00e+00	1841.00
IUUC-Olo-080417	Oryza longistaminata	42.65	0.00e+00	1909.00
IUUC-Ome-081391	Oryza meridionalis	43.17	0.00e+00	1957.00
IUUC-Oni-082062	Oryza nivara	40.90	0.00e+00	1774.00
IUUC-Opu-083178	Oryza punctata	42.80	0.00e+00	1894.00
IUUC-Oru-084803	Oryza rufipogon	41.04	0.00e+00	1776.00
IUUC-Osa-085645	Oryza sativa	54.40	7.00e-76	275.00
IUUC-Ola-087242	Oryzias latipes	38.09	7.00e-152	531.00
IUUC-Olu-087890	Ostreococcus lucimarinus	37.95	2.00e-137	482.00
IUUC-Oga-088899	Otolemur garnettii	33.52	2.00e-142	501.00
IUUC-Oar-090283	Ovis aries	35.42	1.00e-152	535.00
IUUC-Ptr-091015	Pan troglodytes	34.57	6.00e-137	482.00
IUUC-Psi-093570	Pelodiscus sinensis	33.97	3.00e-144	506.00
IUUC-Pfo-096377	Poecilia formosa	39.66	4.00e-141	496.00
IUUC-Pab-098101	Pongo abelii	34.32	1.00e-144	507.00
IUUC-Pop-099604	Populus trichocarpa	46.35	0.00e+00	2217.00
IUUC-Pca-100386	Procavia capensis	37.67	8.00e-132	465.00
IUUC-Ppe-101836	Prunus persica	46.95	0.00e+00	1763.00
IUUC-Pva-102558	Pteropus vampyrus	39.15	9.00e-143	501.00
IUUC-Rno-104903	Rattus norvegicus	38.89	3.00e-142	500.00
IUUC-Sha-107387	Sarcophilus harrisii	37.71	4.00e-147	516.00
IUUC-Smo-108699	Selaginella moellendorffii	43.92	0.00e+00	1971.00
IUUC-Sit-110075	Setaria italica	45.81	0.00e+00	1526.00
IUUC-Sly-111033	Solanum lycopersicum	47.23	0.00e+00	1450.00
IUUC-Sar-113411	Sorex araneus	39.66	7.00e-120	424.00
IUUC-Sbi-114049	Sorghum bicolor	40.03	0.00e+00	1432.00
IUUC-Tgu-117304	Taeniopygia guttata	38.06	5.00e-151	529.00
IUUC-Tru-118125	Takifugu rubripes	39.46	1.00e-141	498.00
IUUC-Tsy-119218	Tarsius syrichta	38.22	5.00e-107	382.00
IUUC-Tni-120239	Tetraodon nigroviridis	39.02	5.00e-140	492.00
IUUC-Tca-121572	Theobroma cacao	47.05	0.00e+00	2290.00
IUUC-Tae-124172	Triticum aestivum	38.72	0.00e+00	1258.00
IUUC-Tur-126212	Triticum urartu	44.52	0.00e+00	1288.00
IUUC-Ttr-128941	Tursiops truncatus	35.00	2.00e-146	513.00
IUUC-Vvi-130860	Vitis vinifera	46.99	0.00e+00	2281.00
IUUC-Xtr-132038	Xenopus tropicalis	32.17	7.00e-136	479.00
IUUC-Xma-133685	Xiphophorus maculatus	34.40	1.00e-141	498.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence