iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cpo-021527

Ensembl Protein ID

ENSCPOP00000012493.2

UniProt Accession

H0VPQ6; H0VPQ6_CAVPO

Genbank Protein ID

ENSCPOP00000012493

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02012956

Gene Name

RRP9

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000013864.3	ENSCPOT00000014004.2	ENSCPOP00000012493.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-28	97.8	322	356
UBD/Beta-Prp	5.20e-42	144.0	145	359

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgv 34
           gH++s+ cl++ ++ ++vsG+dDg++ +W l++ +
   Q: 322  GHQGSIDCLHLiNEEHMVSGADDGSVALWGLSKKR 356
           8*********9999***************987665 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkl...........lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkc 86
           h+  itc+ ++pd+s ++++ +d ti+ w+v++g +             +  gh++ + ++ +s+dgk+l++g + ++i +w+ ++++ 
   Q: 145  HQLSITCLVITPDDSAIFSAAKDCTIIKWSVESGRKlhviprakkgvEGQAPGHSSHILCMAISSDGKYLASGDRSKLILIWEAQSCCH 233
           56689999999***********************99999999999988899999999******************************** PP
   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl 175
           ++t++gh d v  l+f + ++ l s+shdr ++vw++ +++ +e tl gh+++v  +   + ++++ +G+ D+tvr+W+++ ++ l   
   Q: 234  LYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVE-TLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKIPEESQLVFY 321
           ******************99***********************9.***********************************999988755 PP
   S: 176  tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvr 216
            g h++s+ +l +  + +++vsg++dg+v lw l++++ + 
   Q: 322  -G-HQGSIDCLHLINE-EHMVSGADDGSVALWGLSKKRPLA 359
           .6.*********8886.7****************9988765 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

VGSMSATVAA RKRRKPASGV GAGKRPLKVD PVGDSSKSKG SGKMNEEISS DSESESLAPK 60
RTKEEEEEEE LEETAQEKKL RLAKLYLEQL RQQEEEKAEA RAFEEDQVAG RLKEDVLEQR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGGGCAGCA TGTCGGCCAC AGTGGCAGCT CGAAAGCGGA GAAAGCCGGC CTCCGGGGTT 60
GGGGCTGGCA AGAGGCCGCT AAAGGTGAGG ATGGCGTTAC CGTGGGCTGT GGTCTGTCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031428--C:box C/D snoRNP complex
GO:0034511--F:U3 snoRNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000586	Aegilops tauschii	33.77	1.00e-56	214.00
IUUC-Aml-002072	Ailuropoda melanoleuca	91.65	0.00e+00	744.00
IUUC-Atr-002824	Amborella trichopoda	36.72	1.00e-68	254.00
IUUC-Apl-003264	Anas platyrhynchos	75.20	3.00e-166	577.00
IUUC-Aca-004898	Anolis carolinensis	72.71	2.00e-178	618.00
IUUC-Aly-005535	Arabidopsis lyrata	38.54	1.00e-63	237.00
IUUC-Ath-007119	Arabidopsis thaliana	36.50	1.00e-69	257.00
IUUC-Ago-007710	Ashbya gossypii	28.74	3.00e-57	216.00
IUUC-Acl-008345	Aspergillus clavatus	32.83	6.00e-56	211.00
IUUC-Afl-008718	Aspergillus flavus	32.36	2.00e-54	206.00
IUUC-Afu-008966	Aspergillus fumigatus	30.52	4.00e-53	202.00
IUUC-Ani-009214	Aspergillus nidulans	31.36	7.00e-57	215.00
IUUC-Ang-009774	Aspergillus niger	33.50	7.00e-57	214.00
IUUC-Aor-009956	Aspergillus oryzae	32.36	2.00e-54	206.00
IUUC-Ate-010449	Aspergillus terreus	30.56	3.00e-54	206.00
IUUC-Ame-011860	Astyanax mexicanus	69.68	6.00e-166	577.00
IUUC-Bgr-012213	Blumeria graminis	30.27	8.00e-61	228.00
IUUC-Bta-012698	Bos taurus	90.32	0.00e+00	721.00
IUUC-Bci-013973	Botrytis cinerea	28.94	8.00e-59	221.00
IUUC-Bdi-014790	Brachypodium distachyon	36.36	2.00e-63	236.00
IUUC-Bol-016068	Brassica oleracea	37.70	7.00e-64	238.00
IUUC-Bra-017410	Brassica rapa	39.04	9.00e-60	224.00
IUUC-Cel-018616	Caenorhabditis elegans	36.55	2.00e-72	266.00
IUUC-Cja-019532	Callithrix jacchus	93.78	0.00e+00	739.00
IUUC-Cfa-020961	Canis familiaris	87.63	0.00e+00	731.00
IUUC-Csa-023106	Chlorocebus sabaeus	94.34	0.00e+00	754.00
IUUC-Cin-025670	Ciona intestinalis	51.66	3.00e-123	434.00
IUUC-Csv-026172	Ciona savignyi	51.41	4.00e-115	407.00
IUUC-Cgl-026619	Colletotrichum gloeosporioides	33.19	3.00e-63	236.00
IUUC-Cne-027070	Cryptococcus neoformans	29.51	3.00e-47	182.00
IUUC-Cme-027125	Cyanidioschyzon merolae	25.77	3.00e-34	140.00
IUUC-Dre-027919	Danio rerio	64.36	5.00e-157	547.00
IUUC-Dno-029684	Dasypus novemcinctus	92.13	2.00e-165	575.00
IUUC-Dor-030363	Dipodomys ordii	87.19	5.00e-105	374.00
IUUC-Dse-031503	Dothistroma septosporum	31.80	7.00e-60	224.00
IUUC-Dme-031979	Drosophila melanogaster	44.39	1.00e-96	347.00
IUUC-Eca-033735	Equus caballus	94.08	0.00e+00	719.00
IUUC-Fca-036193	Felis catus	93.29	0.00e+00	737.00
IUUC-Fal-037058	Ficedula albicollis	70.83	1.00e-169	588.00
IUUC-Fox-038036	Fusarium oxysporum	32.48	1.00e-64	240.00
IUUC-Fso-038298	Fusarium solani	32.75	1.00e-62	233.00
IUUC-Gmo-038796	Gadus morhua	64.14	4.00e-138	484.00
IUUC-Ggr-040074	Gaeumannomyces graminis	31.16	1.00e-53	204.00
IUUC-Gga-040743	Gallus gallus	77.03	2.00e-135	474.00
IUUC-Gac-042583	Gasterosteus aculeatus	63.59	1.00e-161	563.00
IUUC-Gma-042659	Glycine max	39.65	1.00e-79	290.00
IUUC-Ggo-045543	Gorilla gorilla	91.39	0.00e+00	753.00
IUUC-Hsa-047017	Homo sapiens	94.34	0.00e+00	752.00
IUUC-Hvu-047173	Hordeum vulgare	37.66	2.00e-69	256.00
IUUC-Itr-048062	Ictidomys tridecemlineatus	85.08	0.00e+00	730.00
IUUC-Kpa-049262	Komagataella pastoris	31.50	2.00e-57	216.00
IUUC-Lch-050566	Latimeria chalumnae	72.04	1.00e-153	536.00
IUUC-Lpe-051651	Leersia perrieri	35.31	2.00e-64	239.00
IUUC-Loc-051997	Lepisosteus oculatus	70.64	4.00e-161	561.00
IUUC-Lma-053182	Leptosphaeria maculans	30.10	2.00e-60	226.00
IUUC-Laf-054105	Loxodonta africana	89.13	0.00e+00	715.00
IUUC-Mcc-055215	Macaca mulatta	94.34	0.00e+00	755.00
IUUC-Meu-055943	Macropus eugenii	82.17	0.00e+00	654.00
IUUC-Mor-057069	Magnaporthe oryzae	32.18	9.00e-64	238.00
IUUC-Mpo-057358	Magnaporthe poae	31.16	3.00e-51	196.00
IUUC-Mtr-058209	Medicago truncatula	39.70	1.00e-78	286.00
IUUC-Mla-059043	Melampsora laricipopulina	27.08	2.00e-47	183.00
IUUC-Mga-060024	Meleagris gallopavo	75.93	1.00e-153	535.00
IUUC-Mvi-060371	Microbotryum violaceum	31.35	3.00e-65	243.00
IUUC-Mmr-061403	Microcebus murinus	93.17	0.00e+00	735.00
IUUC-Mdo-063026	Monodelphis domestica	77.26	0.00e+00	662.00
IUUC-Mmu-063646	Mus musculus	91.26	0.00e+00	741.00
IUUC-Mac-064801	Musa acuminata	37.10	2.00e-74	273.00
IUUC-Mpu-065760	Mustela putorius furo	89.87	0.00e+00	751.00
IUUC-Mlu-067963	Myotis lucifugus	93.19	0.00e+00	732.00
IUUC-Nfi-068288	Neosartorya fischeri	32.54	9.00e-57	214.00
IUUC-Ncr-068679	Neurospora crassa	32.76	6.00e-56	211.00
IUUC-Nle-069766	Nomascus leucogenys	86.23	0.00e+00	677.00
IUUC-Opr-070906	Ochotona princeps	91.93	0.00e+00	749.00
IUUC-Ont-071661	Oreochromis niloticus	62.87	7.00e-164	570.00
IUUC-Oan-073465	Ornithorhynchus anatinus	67.50	4.00e-149	520.00
IUUC-Ocu-074263	Oryctolagus cuniculus	90.59	0.00e+00	751.00
IUUC-Oba-075607	Oryza barthii	37.54	6.00e-59	221.00
IUUC-Ogl-077387	Oryza glaberrima	36.94	6.00e-63	234.00
IUUC-Ogu-078323	Oryza glumaepatula	37.77	4.00e-63	235.00
IUUC-Oin-079977	Oryza indica	31.53	2.00e-42	166.00
IUUC-Olo-080857	Oryza longistaminata	37.66	4.00e-63	235.00
IUUC-Ome-081568	Oryza meridionalis	37.40	2.00e-62	233.00
IUUC-Oni-082685	Oryza nivara	37.77	2.00e-66	246.00
IUUC-Opu-084049	Oryza punctata	37.50	4.00e-63	235.00
IUUC-Oru-084348	Oryza rufipogon	37.77	2.00e-66	246.00
IUUC-Osa-086076	Oryza sativa	37.77	2.00e-66	246.00
IUUC-Ola-086991	Oryzias latipes	68.86	1.00e-158	552.00
IUUC-Olu-087891	Ostreococcus lucimarinus	36.01	2.00e-64	239.00
IUUC-Oga-088991	Otolemur garnettii	93.50	0.00e+00	750.00
IUUC-Oar-090430	Ovis aries	92.16	0.00e+00	711.00
IUUC-Ptr-091359	Pan troglodytes	94.57	0.00e+00	753.00
IUUC-Pan-092499	Papio anubis	94.12	0.00e+00	752.00
IUUC-Pma-094447	Petromyzon marinus	61.21	2.00e-128	452.00
IUUC-Pno-095008	Phaeosphaeria nodorum	30.20	1.00e-61	230.00
IUUC-Ppa-095680	Physcomitrella patens	39.37	8.00e-76	277.00
IUUC-Pfo-096430	Poecilia formosa	68.84	1.00e-160	559.00
IUUC-Pab-097649	Pongo abelii	94.34	0.00e+00	750.00
IUUC-Pop-100055	Populus trichocarpa	40.90	6.00e-78	284.00
IUUC-Pca-100317	Procavia capensis	74.50	8.00e-131	460.00
IUUC-Ppe-101999	Prunus persica	37.59	2.00e-76	279.00
IUUC-Pva-103046	Pteropus vampyrus	93.03	0.00e+00	741.00
IUUC-Pgr-103655	Puccinia graminis	30.02	8.00e-53	201.00
IUUC-Ptt-103812	Puccinia triticina	31.91	2.00e-47	183.00
IUUC-Pte-104243	Pyrenophora teres	30.02	7.00e-56	211.00
IUUC-Pyt-104512	Pyrenophora triticirepentis	29.90	1.00e-57	218.00
IUUC-Rno-104973	Rattus norvegicus	91.39	0.00e+00	736.00
IUUC-Sce-106329	Saccharomyces cerevisiae	26.04	2.00e-50	193.00
IUUC-Sha-106941	Sarcophilus harrisii	84.60	0.00e+00	663.00
IUUC-Sja-107821	Schizosaccharomyces japonicus	32.81	3.00e-62	232.00
IUUC-Spo-108329	Schizosaccharomyces pombe	35.68	2.00e-70	259.00
IUUC-Ssl-108552	Sclerotinia sclerotiorum	28.91	6.00e-59	221.00
IUUC-Smo-109198	Selaginella moellendorffii	38.10	2.00e-62	232.00
IUUC-Sit-109694	Setaria italica	36.63	7.00e-70	258.00
IUUC-Sly-111294	Solanum lycopersicum	38.01	2.00e-76	279.00
IUUC-Stu-112747	Solanum tuberosum	38.52	1.00e-77	283.00
IUUC-Sar-113315	Sorex araneus	71.14	9.00e-72	264.00
IUUC-Sbi-114694	Sorghum bicolor	36.08	2.00e-69	256.00
IUUC-Sre-114937	Sporisorium reilianum	28.76	7.00e-63	234.00
IUUC-Ssc-116127	Sus scrofa	93.53	0.00e+00	726.00
IUUC-Tgu-117242	Taeniopygia guttata	70.92	1.00e-106	379.00
IUUC-Tru-118285	Takifugu rubripes	67.77	6.00e-165	573.00
IUUC-Tni-120368	Tetraodon nigroviridis	67.51	2.00e-158	551.00
IUUC-Tca-121724	Theobroma cacao	36.64	9.00e-71	261.00
IUUC-Tre-122106	Trichoderma reesei	33.26	4.00e-67	249.00
IUUC-Tvi-122526	Trichoderma virens	32.12	3.00e-66	246.00
IUUC-Tae-122939	Triticum aestivum	37.14	3.00e-68	252.00
IUUC-Tur-126548	Triticum urartu	37.14	5.00e-68	251.00
IUUC-Tme-126985	Tuber melanosporum	35.28	1.00e-64	240.00
IUUC-Tbe-127923	Tupaia belangeri	96.23	0.00e+00	738.00
IUUC-Ttr-129308	Tursiops truncatus	87.84	0.00e+00	665.00
IUUC-Uma-129472	Ustilago maydis	29.98	5.00e-58	219.00
IUUC-Vda-129910	Verticillium dahliae	31.77	7.00e-63	234.00
IUUC-Vvi-131683	Vitis vinifera	38.85	3.00e-83	302.00
IUUC-Xtr-132118	Xenopus tropicalis	66.67	3.00e-155	541.00
IUUC-Xma-133804	Xiphophorus maculatus	68.34	5.00e-159	554.00
IUUC-Yli-134639	Yarrowia lipolytica	32.47	2.00e-61	229.00
IUUC-Zma-135884	Zea mays	36.71	1.00e-70	260.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence