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Tag Content
UUCD2 ID IUUC-Sbi-113927
UUCD1 version UUC-SoB-00349
Ensembl Protein ID Sb04g021470.1
UniProt Accession C5XTC7; C5XTC7_SORBI
Genbank Protein ID EES05168.1
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000763
Gene Name SORBI_004G163000
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb04g021470 Sb04g021470.1 Sb04g021470.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 9.40e-08 33.3 789 829
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCle f+d  +++pC H  +++Cl   w      s ++ +CP+Cr
   Q: 789  CPICLEAFED-AVLTPCAHRLCRECLlSSW-----RSATAGLCPVCR 829
           **********.888***********99999.....6888889****8 PP
   
Organism Sorghum bicolor
Protein Sequence
(Fasta)
MGKEREEQVA MVRAVLGDGT PEMDIIRALH MAGDDPTKAI NILLDFNHNA APPLPPTPTP 60
TPSPSPSPPP GKPAKALVDS NPPPPPPRKA PTRPMPTAEK SKPAAPTTNG GGGEHWWLVG 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Sbi-113927|E3,RING|Sorghum bicolor
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGGGAAGG AGCGGGAGGA GCAGGTGGCC ATGGTGCGCG CGGTGCTCGG CGACGGCACG 60
CCGGAGATGG ACATCATCCG TGCTCTCCAC ATGGCCGGCG ACGACCCCAC CAAGGCCATT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Sbi-113927|E3,RING|Sorghum bicolor
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014905--HIRAN
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF00271--Helicase_C
PF08797--HIRAN
PF00176--SNF2_N
SMART

SM00487--DEXDc
SM00490--HELICc
SM00910--HIRAN
SM00184--RING
Gene Ontology

GO:0005524--F:ATP binding
GO:0016818--F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding
GO:0009294--P:DNA mediated transformation
GO:0045003--P:double-strand break repair via synthesis-dependent strand annealing
KEGG sbi:SORBI_04g021470
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Atr-003139 Amborella trichopoda 67.70 0.00e+00 1316.00
IUUC-Aca-004994 Anolis carolinensis 38.59 2.00e-105 376.00
IUUC-Aly-006331 Arabidopsis lyrata 68.26 0.00e+00 1293.00
IUUC-Ath-007517 Arabidopsis thaliana 63.78 0.00e+00 1317.00
IUUC-Ago-007997 Ashbya gossypii 30.68 6.00e-107 381.00
IUUC-Acl-008022 Aspergillus clavatus 28.92 2.00e-123 436.00
IUUC-Afl-008514 Aspergillus flavus 30.93 2.00e-124 439.00
IUUC-Afu-009055 Aspergillus fumigatus 31.26 3.00e-126 446.00
IUUC-Ani-009340 Aspergillus nidulans 32.04 3.00e-127 449.00
IUUC-Ang-009785 Aspergillus niger 31.03 2.00e-130 459.00
IUUC-Aor-010158 Aspergillus oryzae 30.93 2.00e-124 439.00
IUUC-Ate-010536 Aspergillus terreus 29.69 1.00e-109 390.00
IUUC-Ame-011743 Astyanax mexicanus 38.62 3.00e-99 355.00
IUUC-Bgr-012147 Blumeria graminis 33.48 5.00e-133 468.00
IUUC-Bci-013741 Botrytis cinerea 33.11 3.00e-131 462.00
IUUC-Bdi-014646 Brachypodium distachyon 84.09 0.00e+00 1659.00
IUUC-Bol-015484 Brassica oleracea 61.08 0.00e+00 1274.00
IUUC-Bra-016925 Brassica rapa 61.56 0.00e+00 1283.00
IUUC-Cfa-020485 Canis familiaris 37.25 9.00e-96 344.00
IUUC-Cpo-021361 Cavia porcellus 37.36 4.00e-97 347.00
IUUC-Cre-022824 Chlamydomonas reinhardtii 26.57 9.00e-56 212.00
IUUC-Csv-026168 Ciona savignyi 26.60 3.00e-60 225.00
IUUC-Cne-026886 Cryptococcus neoformans 32.55 2.00e-134 473.00
IUUC-Cme-027110 Cyanidioschyzon merolae 36.69 7.00e-126 444.00
IUUC-Dre-027867 Danio rerio 39.71 6.00e-113 401.00
IUUC-Dor-030651 Dipodomys ordii 31.81 3.00e-82 299.00
IUUC-Dse-031471 Dothistroma septosporum 35.68 6.00e-129 454.00
IUUC-Dme-031815 Drosophila melanogaster 31.11 3.00e-66 246.00
IUUC-Ete-032421 Echinops telfairi 32.77 2.00e-75 276.00
IUUC-Fox-038039 Fusarium oxysporum 37.63 6.00e-133 468.00
IUUC-Fso-038179 Fusarium solani 34.62 1.00e-142 500.00
IUUC-Ggr-039735 Gaeumannomyces graminis 32.85 5.00e-124 438.00
IUUC-Gac-042401 Gasterosteus aculeatus 38.29 1.00e-108 387.00
IUUC-Gma-042995 Glycine max 64.64 0.00e+00 1330.00
IUUC-Ggo-045628 Gorilla gorilla 37.36 1.00e-105 377.00
IUUC-Hsa-045930 Homo sapiens 37.36 2.00e-105 376.00
IUUC-Hvu-047495 Hordeum vulgare 81.98 0.00e+00 1445.00
IUUC-Kpa-049087 Komagataella pastoris 32.06 1.00e-109 390.00
IUUC-Lch-050617 Latimeria chalumnae 38.66 8.00e-109 387.00
IUUC-Lpe-051584 Leersia perrieri 82.04 0.00e+00 1590.00
IUUC-Loc-052785 Lepisosteus oculatus 39.46 2.00e-114 406.00
IUUC-Lma-052956 Leptosphaeria maculans 35.19 2.00e-128 452.00
IUUC-Mor-057210 Magnaporthe oryzae 32.39 3.00e-130 459.00
IUUC-Mpo-057407 Magnaporthe poae 33.02 5.00e-132 464.00
IUUC-Mtr-058565 Medicago truncatula 67.17 0.00e+00 1264.00
IUUC-Mlu-068076 Myotis lucifugus 37.24 4.00e-98 352.00
IUUC-Nfi-068354 Neosartorya fischeri 31.36 4.00e-126 445.00
IUUC-Ncr-068844 Neurospora crassa 35.96 2.00e-127 449.00
IUUC-Nle-069947 Nomascus leucogenys 37.43 4.00e-105 375.00
IUUC-Ont-071782 Oreochromis niloticus 38.50 3.00e-106 379.00
IUUC-Oan-073331 Ornithorhynchus anatinus 35.20 2.00e-96 346.00
IUUC-Ocu-074705 Oryctolagus cuniculus 37.39 4.00e-103 368.00
IUUC-Oba-075937 Oryza barthii 84.14 0.00e+00 1521.00
IUUC-Obr-076403 Oryza brachyantha 81.91 0.00e+00 1598.00
IUUC-Ogl-077573 Oryza glaberrima 85.05 0.00e+00 1721.00
IUUC-Ogu-077957 Oryza glumaepatula 84.10 0.00e+00 1536.00
IUUC-Oin-079146 Oryza indica 84.62 0.00e+00 1706.00
IUUC-Olo-080437 Oryza longistaminata 74.81 0.00e+00 1322.00
IUUC-Ome-081448 Oryza meridionalis 82.82 0.00e+00 1656.00
IUUC-Oni-082389 Oryza nivara 80.71 0.00e+00 1580.00
IUUC-Opu-083322 Oryza punctata 82.44 0.00e+00 1613.00
IUUC-Oru-085066 Oryza rufipogon 80.97 0.00e+00 1590.00
IUUC-Osa-085686 Oryza sativa 89.42 0.00e+00 1471.00
IUUC-Ptr-091418 Pan troglodytes 37.36 3.00e-105 375.00
IUUC-Pan-092579 Papio anubis 35.87 1.00e-57 217.00
IUUC-Psi-093626 Pelodiscus sinensis 37.23 2.00e-105 376.00
IUUC-Pno-094916 Phaeosphaeria nodorum 36.57 3.00e-128 452.00
IUUC-Ppa-095877 Physcomitrella patens 55.10 0.00e+00 1033.00
IUUC-Pfo-096540 Poecilia formosa 38.78 1.00e-107 383.00
IUUC-Pab-098010 Pongo abelii 37.36 3.00e-105 375.00
IUUC-Pop-099320 Populus trichocarpa 65.03 0.00e+00 1349.00
IUUC-Ppe-101820 Prunus persica 63.45 0.00e+00 1315.00
IUUC-Pgr-103454 Puccinia graminis 28.08 3.00e-109 389.00
IUUC-Ptt-103829 Puccinia triticina 28.20 2.00e-90 327.00
IUUC-Pte-104242 Pyrenophora teres 35.54 1.00e-128 453.00
IUUC-Pyt-104728 Pyrenophora triticirepentis 34.47 2.00e-126 446.00
IUUC-Rno-106130 Rattus norvegicus 37.75 1.00e-103 370.00
IUUC-Sce-106396 Saccharomyces cerevisiae 32.78 7.00e-104 371.00
IUUC-Sja-107985 Schizosaccharomyces japonicus 31.19 1.00e-127 450.00
IUUC-Spo-108026 Schizosaccharomyces pombe 33.08 2.00e-136 479.00
IUUC-Ssl-108388 Sclerotinia sclerotiorum 32.94 1.00e-135 476.00
IUUC-Smo-108977 Selaginella moellendorffii 70.16 5.00e-159 552.00
IUUC-Sit-110076 Setaria italica 88.61 0.00e+00 1746.00
IUUC-Sly-111908 Solanum lycopersicum 69.62 0.00e+00 1307.00
IUUC-Sar-113719 Sorex araneus 37.25 1.00e-105 377.00
IUUC-Sre-115131 Sporisorium reilianum 32.68 7.00e-118 418.00
IUUC-Tsy-118957 Tarsius syrichta 37.52 5.00e-98 352.00
IUUC-Tni-120618 Tetraodon nigroviridis 37.63 1.00e-105 377.00
IUUC-Tca-121137 Theobroma cacao 65.19 0.00e+00 1366.00
IUUC-Tre-121896 Trichoderma reesei 32.94 3.00e-134 472.00
IUUC-Tvi-122597 Trichoderma virens 38.40 1.00e-136 480.00
IUUC-Tae-125934 Triticum aestivum 83.15 0.00e+00 1627.00
IUUC-Tur-126433 Triticum urartu 86.55 0.00e+00 1225.00
IUUC-Tme-126953 Tuber melanosporum 33.41 9.00e-130 457.00
IUUC-Ttr-128243 Tursiops truncatus 35.42 7.00e-51 195.00
IUUC-Uma-129629 Ustilago maydis 32.33 6.00e-121 428.00
IUUC-Vda-129849 Verticillium dahliae 34.85 2.00e-116 413.00
IUUC-Vvi-130943 Vitis vinifera 64.62 0.00e+00 1367.00
IUUC-Xtr-132730 Xenopus tropicalis 38.56 6.00e-111 394.00
IUUC-Xma-133384 Xiphophorus maculatus 37.30 7.00e-108 384.00
Created Date 25-Jun-2017

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