iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002514

Ensembl Protein ID

ERN05993

UniProt Accession

W1PDF8; W1PDF8_AMBTC

Genbank Protein ID

ERN05993.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI393946

Gene Name

AMTR_s00143p00072740

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00143p00072740	ERN05993	ERN05993

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.80e-50	165.1	484	523
UBD/Beta-Prp	2.50e-67	227.6	351	557

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH+++v+++af ++  +l+sGs D+ i++W++++g+l+k+
   Q: 484  GHKEPVYSVAFsPSgEFLASGSFDKCIHIWSVKDGRLVKT 523
           8***********666*********************9985 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp..... 104
           h+++  +v++ +++  +at s+d++i v ++ +   ++ +sgh++ev+a+k++p+g++l+++s+D t+k+w+l++ kc+h l++h+++++++++sp     
   Q: 351  HSAPTLDVDW-RNNVSFATCSTDSMIYVCKIGERAPIKIFSGHQGEVNAIKWDPTGSLLASCSDDFTAKIWSLKQDKCLHDLREHTKEIYTIKWSPtgqgt 450
           6666667777.455558999999999999999999999999999999999999999999999999999999999999999999999999999999977776 PP
   S: 105  ....sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsld 201
               ++  l+s+s d+t+++wd+e+g  l+  l+gh++ v +v+++p+g  l+sGs D+++ +W++k g+l++t tg   + +  + ++++g  ++++  +
   Q: 451  nnpnQQLLLASASFDSTVKLWDVEQGVMLS-SLNGHKEPVYSVAFSPSGEFLASGSFDKCIHIWSVKDGRLVKTYTG--SGGIFEVCWNKEGDKVAACFSN 548
           655333578999999999999999999999.9999999999999999999999999999999999999999999998..8999999999999999999999 PP
   S: 202  gtvklwdlq 210
           +tv + d++
   Q: 549  STVCVLDIR 557
           999888875 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MVHSAFALGY EAGINKSTID GNLVPPGALV TFVQKGLQYL ELEANLSNSD TDVDDDFSFL 60
QPLDLITKNV YELRQIIKEK KENLQKDKEK EKEKEYDHEH EREREHVRVR ERDRQEREKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTCGTACA TTCAGCATTT GCTCTTGGAT ATGAAGCTGG GATTAATAAA AGTACTATAG 60
ATGGAAATTT AGTTCCACCT GGTGCTCTTG TAACTTTTGT TCAGAAAGGA CTACAATATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0016575--P:histone deacetylation
GO:0009409--P:response to cold

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000916	Aegilops tauschii	75.35	6.00e-67	244.00
IUUC-Aml-001717	Ailuropoda melanoleuca	65.38	3.00e-138	484.00
IUUC-Apl-003708	Anas platyrhynchos	65.38	6.00e-138	483.00
IUUC-Aca-004611	Anolis carolinensis	65.38	3.00e-138	484.00
IUUC-Aly-005622	Arabidopsis lyrata	71.07	3.00e-162	563.00
IUUC-Ath-007137	Arabidopsis thaliana	71.78	4.00e-161	560.00
IUUC-Ago-007869	Ashbya gossypii	27.56	2.00e-29	122.00
IUUC-Ame-011601	Astyanax mexicanus	65.66	4.00e-138	483.00
IUUC-Bta-012418	Bos taurus	64.84	5.00e-144	503.00
IUUC-Bdi-014315	Brachypodium distachyon	79.89	5.00e-178	616.00
IUUC-Bol-016277	Brassica oleracea	69.73	1.00e-165	575.00
IUUC-Bra-016944	Brassica rapa	69.80	1.00e-165	575.00
IUUC-Cja-018832	Callithrix jacchus	65.38	4.00e-138	483.00
IUUC-Cfa-020029	Canis familiaris	65.38	3.00e-138	484.00
IUUC-Cpo-021682	Cavia porcellus	63.13	3.00e-143	500.00
IUUC-Cre-022979	Chlamydomonas reinhardtii	63.41	1.00e-132	465.00
IUUC-Csa-024075	Chlorocebus sabaeus	65.38	3.00e-138	484.00
IUUC-Cin-025704	Ciona intestinalis	60.63	3.00e-140	490.00
IUUC-Csv-026257	Ciona savignyi	60.22	9.00e-137	479.00
IUUC-Cne-026946	Cryptococcus neoformans	33.48	1.00e-26	113.00
IUUC-Cme-027258	Cyanidioschyzon merolae	44.50	1.00e-95	342.00
IUUC-Dre-027906	Danio rerio	65.11	2.00e-137	481.00
IUUC-Dno-029196	Dasypus novemcinctus	65.38	3.00e-138	484.00
IUUC-Dor-030732	Dipodomys ordii	65.08	7.00e-134	469.00
IUUC-Dme-031939	Drosophila melanogaster	61.97	4.00e-129	454.00
IUUC-Ete-033150	Echinops telfairi	65.55	1.00e-122	432.00
IUUC-Eca-033897	Equus caballus	62.60	6.00e-143	499.00
IUUC-Eeu-034952	Erinaceus europaeus	57.54	2.00e-114	404.00
IUUC-Fca-035734	Felis catus	65.38	3.00e-138	484.00
IUUC-Fal-037185	Ficedula albicollis	65.38	3.00e-138	484.00
IUUC-Gmo-038870	Gadus morhua	64.84	6.00e-142	496.00
IUUC-Gga-041161	Gallus gallus	65.38	3.00e-138	484.00
IUUC-Gac-041844	Gasterosteus aculeatus	65.38	5.00e-145	506.00
IUUC-Gma-043369	Glycine max	75.31	0.00e+00	634.00
IUUC-Ggo-044882	Gorilla gorilla	65.38	3.00e-138	484.00
IUUC-Hsa-046488	Homo sapiens	65.38	3.00e-138	484.00
IUUC-Itr-047958	Ictidomys tridecemlineatus	65.38	3.00e-137	480.00
IUUC-Kpa-049338	Komagataella pastoris	28.91	2.00e-31	129.00
IUUC-Lch-050672	Latimeria chalumnae	64.56	5.00e-137	479.00
IUUC-Lpe-051084	Leersia perrieri	78.88	0.00e+00	634.00
IUUC-Loc-052030	Lepisosteus oculatus	65.11	6.00e-145	506.00
IUUC-Laf-054280	Loxodonta africana	65.11	9.00e-145	505.00
IUUC-Mcc-055203	Macaca mulatta	65.38	3.00e-138	483.00
IUUC-Meu-056563	Macropus eugenii	69.75	7.00e-97	346.00
IUUC-Mtr-058624	Medicago truncatula	65.30	0.00e+00	684.00
IUUC-Mga-059660	Meleagris gallopavo	65.38	3.00e-138	484.00
IUUC-Mvi-060557	Microbotryum violaceum	36.62	5.00e-73	268.00
IUUC-Mmr-060925	Microcebus murinus	65.38	2.00e-137	481.00
IUUC-Mdo-062078	Monodelphis domestica	65.11	8.00e-138	482.00
IUUC-Mmu-063603	Mus musculus	65.66	1.00e-138	485.00
IUUC-Mac-065508	Musa acuminata	62.28	3.00e-108	384.00
IUUC-Mpu-066741	Mustela putorius furo	65.38	3.00e-138	484.00
IUUC-Mlu-068152	Myotis lucifugus	65.38	3.00e-138	484.00
IUUC-Nle-069229	Nomascus leucogenys	65.38	3.00e-138	484.00
IUUC-Opr-070277	Ochotona princeps	53.91	4.00e-103	367.00
IUUC-Ont-071569	Oreochromis niloticus	65.93	1.00e-145	508.00
IUUC-Oan-073562	Ornithorhynchus anatinus	62.86	1.00e-143	501.00
IUUC-Ocu-074280	Oryctolagus cuniculus	65.38	2.00e-138	484.00
IUUC-Oba-075618	Oryza barthii	63.51	0.00e+00	678.00
IUUC-Obr-076718	Oryza brachyantha	79.43	0.00e+00	631.00
IUUC-Ogl-077302	Oryza glaberrima	65.75	0.00e+00	721.00
IUUC-Ogu-078718	Oryza glumaepatula	65.92	0.00e+00	721.00
IUUC-Oin-079515	Oryza indica	56.96	2.00e-136	479.00
IUUC-Olo-080427	Oryza longistaminata	60.75	0.00e+00	664.00
IUUC-Ome-081696	Oryza meridionalis	64.89	0.00e+00	703.00
IUUC-Oni-082137	Oryza nivara	65.92	0.00e+00	721.00
IUUC-Opu-083505	Oryza punctata	64.29	0.00e+00	661.00
IUUC-Oru-085276	Oryza rufipogon	66.09	0.00e+00	723.00
IUUC-Osa-085791	Oryza sativa	65.92	0.00e+00	721.00
IUUC-Ola-087365	Oryzias latipes	64.84	9.00e-144	502.00
IUUC-Olu-087589	Ostreococcus lucimarinus	66.58	2.00e-148	517.00
IUUC-Oga-088357	Otolemur garnettii	63.46	5.00e-128	449.00
IUUC-Oar-089214	Ovis aries	65.11	7.00e-145	506.00
IUUC-Ptr-091532	Pan troglodytes	65.38	3.00e-138	484.00
IUUC-Pan-091927	Papio anubis	65.38	3.00e-138	484.00
IUUC-Psi-093941	Pelodiscus sinensis	61.65	9.00e-137	479.00
IUUC-Pma-094105	Petromyzon marinus	60.45	5.00e-41	160.00
IUUC-Ppa-095868	Physcomitrella patens	77.95	4.00e-175	606.00
IUUC-Pfo-096158	Poecilia formosa	65.11	1.00e-144	505.00
IUUC-Pab-098705	Pongo abelii	65.38	3.00e-138	484.00
IUUC-Pop-098989	Populus trichocarpa	79.89	1.00e-177	614.00
IUUC-Pca-100256	Procavia capensis	64.72	1.00e-134	472.00
IUUC-Ppe-101572	Prunus persica	77.56	2.00e-172	597.00
IUUC-Pva-102616	Pteropus vampyrus	65.08	1.00e-134	472.00
IUUC-Rno-105411	Rattus norvegicus	65.38	5.00e-138	483.00
IUUC-Sce-106132	Saccharomyces cerevisiae	25.99	5.00e-33	134.00
IUUC-Sha-106636	Sarcophilus harrisii	65.11	1.00e-137	481.00
IUUC-Smo-109301	Selaginella moellendorffii	79.01	3.00e-175	606.00
IUUC-Sit-110710	Setaria italica	66.19	0.00e+00	690.00
IUUC-Sly-111336	Solanum lycopersicum	76.05	9.00e-179	618.00
IUUC-Stu-112786	Solanum tuberosum	68.58	2.00e-160	557.00
IUUC-Sar-112971	Sorex araneus	57.62	3.00e-122	430.00
IUUC-Sbi-114420	Sorghum bicolor	80.47	0.00e+00	649.00
IUUC-Sre-115175	Sporisorium reilianum	43.48	4.00e-57	215.00
IUUC-Ssc-115695	Sus scrofa	65.38	2.00e-138	484.00
IUUC-Tgu-116898	Taeniopygia guttata	62.86	1.00e-143	501.00
IUUC-Tru-118254	Takifugu rubripes	65.66	7.00e-145	506.00
IUUC-Tsy-118853	Tarsius syrichta	50.26	7.00e-104	369.00
IUUC-Tni-119986	Tetraodon nigroviridis	65.38	5.00e-144	503.00
IUUC-Tca-121739	Theobroma cacao	73.02	1.00e-178	618.00
IUUC-Tae-125368	Triticum aestivum	79.84	2.00e-178	617.00
IUUC-Tur-126856	Triticum urartu	79.72	1.00e-91	328.00
IUUC-Tme-127126	Tuber melanosporum	36.20	1.00e-53	202.00
IUUC-Tbe-127767	Tupaia belangeri	65.78	1.00e-121	427.00
IUUC-Ttr-128826	Tursiops truncatus	62.50	1.00e-125	442.00
IUUC-Uma-129469	Ustilago maydis	40.71	3.00e-57	216.00
IUUC-Vpa-130768	Vicugna pacos	64.72	8.00e-135	472.00
IUUC-Vvi-131193	Vitis vinifera	76.28	0.00e+00	634.00
IUUC-Xtr-132842	Xenopus tropicalis	62.53	7.00e-130	456.00
IUUC-Xma-134020	Xiphophorus maculatus	65.11	1.00e-144	505.00
IUUC-Yli-134648	Yarrowia lipolytica	28.27	2.00e-42	166.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence