iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093638

Ensembl Protein ID

ENSPSIP00000017733.1

UniProt Accession

K7GBS2; K7GBS2_PELSI

Genbank Protein ID

ENSPSIP00000017733

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01177596

Gene Name

LDB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000015734.1	ENSPSIT00000017813.1	ENSPSIP00000017733.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/U-box	61.00	3.00e-120	428.00	IUUC-Dme-031667

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MSSTPHDPFY SSPFGPFYRR HSPYMVQPEY RIYEMNKRLQ SRTEDSDNLW WDAFATEFFE 60
DDATLTLSFC LEDGPKRYTI GRTLIPRYFS TVFEGGVTDL YYVLKHSKES YHNSSITVDC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCCCCTTA ACACCTTTCC CCAGTTCCTT GCTTTTTTTT ATGTTTCTGG GAGGTTTATG 60
TTAAAATCTT GAGTGCTCTC CCTTGTGTGA AGTGTGTTAT TGAGATTATT TCTGTGAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR030174--LDB2
IPR029005--LIM-bd/SEUSS

Gene Ontology

GO:0031252--C:cell leading edge
GO:0005730--C:nucleolus
GO:0005886--C:plasma membrane
GO:0005667--C:transcription factor complex
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0010669--P:epithelial structure maintenance
GO:0044089--P:positive regulation of cellular component biogenesis
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0030334--P:regulation of cell migration
GO:0043549--P:regulation of kinase activity
GO:0035019--P:somatic stem cell population maintenance

KEGG

pss:102448148

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000177	Aegilops tauschii	23.84	5.00e-04	40.00
IUUC-Aml-002031	Ailuropoda melanoleuca	76.67	1.00e-151	529.00
IUUC-Atr-003083	Amborella trichopoda	20.36	1.00e-04	42.40
IUUC-Apl-004210	Anas platyrhynchos	76.62	2.00e-120	424.00
IUUC-Aca-005241	Anolis carolinensis	78.77	5.00e-158	550.00
IUUC-Aly-006204	Arabidopsis lyrata	24.56	2.00e-06	48.10
IUUC-Ath-007339	Arabidopsis thaliana	24.56	2.00e-06	48.10
IUUC-Ame-010910	Astyanax mexicanus	73.74	1.00e-151	528.00
IUUC-Bgr-012180	Blumeria graminis	23.04	5.00e-07	49.70
IUUC-Bta-012596	Bos taurus	95.98	0.00e+00	665.00
IUUC-Bci-013927	Botrytis cinerea	27.95	2.00e-08	54.30
IUUC-Bol-015721	Brassica oleracea	24.40	7.00e-07	49.30
IUUC-Bra-017183	Brassica rapa	24.40	7.00e-07	49.30
IUUC-Cel-018189	Caenorhabditis elegans	34.67	2.00e-29	123.00
IUUC-Cja-019586	Callithrix jacchus	97.59	0.00e+00	690.00
IUUC-Cfa-021188	Canis familiaris	76.67	2.00e-151	528.00
IUUC-Cpo-022350	Cavia porcellus	77.65	3.00e-154	537.00
IUUC-Csa-023816	Chlorocebus sabaeus	77.93	5.00e-156	543.00
IUUC-Cho-024958	Choloepus hoffmanni	79.13	5.00e-93	333.00
IUUC-Cin-025721	Ciona intestinalis	53.11	2.00e-94	338.00
IUUC-Csv-026065	Ciona savignyi	56.66	2.00e-98	351.00
IUUC-Dre-027356	Danio rerio	82.31	0.00e+00	629.00
IUUC-Dno-029918	Dasypus novemcinctus	77.04	6.00e-147	513.00
IUUC-Dor-030634	Dipodomys ordii	77.65	1.00e-155	542.00
IUUC-Dse-031245	Dothistroma septosporum	25.00	5.00e-04	39.70
IUUC-Dme-031667	Drosophila melanogaster	63.56	2.00e-124	439.00
IUUC-Ete-032246	Echinops telfairi	94.64	0.00e+00	660.00
IUUC-Eca-034015	Equus caballus	97.32	0.00e+00	689.00
IUUC-Eeu-034902	Erinaceus europaeus	77.65	1.00e-155	542.00
IUUC-Fca-035903	Felis catus	77.22	5.00e-154	536.00
IUUC-Fal-037407	Ficedula albicollis	98.39	0.00e+00	667.00
IUUC-Gmo-039466	Gadus morhua	74.93	5.00e-159	553.00
IUUC-Ggr-040030	Gaeumannomyces graminis	23.39	5.00e-05	43.10
IUUC-Gga-040214	Gallus gallus	78.21	3.00e-155	540.00
IUUC-Gac-042214	Gasterosteus aculeatus	74.79	6.00e-161	560.00
IUUC-Gma-042794	Glycine max	23.94	2.00e-08	54.30
IUUC-Ggo-044988	Gorilla gorilla	97.59	0.00e+00	696.00
IUUC-Hsa-046092	Homo sapiens	97.32	0.00e+00	684.00
IUUC-Itr-047934	Ictidomys tridecemlineatus	77.65	2.00e-155	541.00
IUUC-Lch-049895	Latimeria chalumnae	89.56	1.00e-110	391.00
IUUC-Lpe-050806	Leersia perrieri	26.76	4.00e-05	43.50
IUUC-Loc-052845	Lepisosteus oculatus	77.09	2.00e-157	548.00
IUUC-Lma-053090	Leptosphaeria maculans	25.20	4.00e-06	47.00
IUUC-Laf-054538	Loxodonta africana	76.69	3.00e-158	550.00
IUUC-Mcc-055116	Macaca mulatta	95.75	6.00e-157	546.00
IUUC-Meu-056777	Macropus eugenii	72.35	2.00e-140	491.00
IUUC-Mpo-057376	Magnaporthe poae	23.70	3.00e-05	43.90
IUUC-Mtr-058142	Medicago truncatula	24.87	9.00e-08	52.40
IUUC-Mga-059716	Meleagris gallopavo	97.32	0.00e+00	662.00
IUUC-Mmr-060649	Microcebus murinus	97.05	0.00e+00	691.00
IUUC-Mdo-062535	Monodelphis domestica	98.39	0.00e+00	685.00
IUUC-Mmu-064036	Mus musculus	95.17	0.00e+00	678.00
IUUC-Mac-065338	Musa acuminata	24.31	4.00e-06	46.60
IUUC-Mpu-065719	Mustela putorius furo	77.65	2.00e-155	541.00
IUUC-Mlu-067219	Myotis lucifugus	76.67	7.00e-153	533.00
IUUC-Ncr-068691	Neurospora crassa	21.37	3.00e-04	40.40
IUUC-Nle-068983	Nomascus leucogenys	97.75	0.00e+00	655.00
IUUC-Opr-070467	Ochotona princeps	77.65	1.00e-155	542.00
IUUC-Ont-071566	Oreochromis niloticus	76.26	9.00e-162	562.00
IUUC-Oan-073368	Ornithorhynchus anatinus	78.21	4.00e-156	543.00
IUUC-Ocu-074854	Oryctolagus cuniculus	96.65	0.00e+00	658.00
IUUC-Ola-086364	Oryzias latipes	75.98	3.00e-161	560.00
IUUC-Oga-088235	Otolemur garnettii	96.51	0.00e+00	679.00
IUUC-Oar-089547	Ovis aries	76.67	3.00e-151	528.00
IUUC-Ptr-091423	Pan troglodytes	97.59	0.00e+00	691.00
IUUC-Pan-092378	Papio anubis	77.93	4.00e-156	543.00
IUUC-Pma-094384	Petromyzon marinus	62.92	3.00e-53	200.00
IUUC-Pno-095027	Phaeosphaeria nodorum	22.18	6.00e-07	49.30
IUUC-Pfo-096031	Poecilia formosa	75.42	1.00e-162	565.00
IUUC-Pab-097886	Pongo abelii	97.75	0.00e+00	655.00
IUUC-Pop-099430	Populus trichocarpa	25.47	1.00e-06	48.50
IUUC-Pca-101138	Procavia capensis	77.65	1.00e-155	542.00
IUUC-Ppe-101293	Prunus persica	23.66	3.00e-07	50.10
IUUC-Pva-103215	Pteropus vampyrus	97.05	0.00e+00	692.00
IUUC-Pte-104238	Pyrenophora teres	29.49	8.00e-06	45.10
IUUC-Rno-105968	Rattus norvegicus	95.71	0.00e+00	682.00
IUUC-Sha-107595	Sarcophilus harrisii	77.37	1.00e-153	536.00
IUUC-Sja-107950	Schizosaccharomyces japonicus	16.67	3.00e-05	42.70
IUUC-Ssl-108527	Sclerotinia sclerotiorum	24.03	6.00e-06	45.80
IUUC-Smo-109552	Selaginella moellendorffii	20.08	6.00e-06	46.20
IUUC-Sly-110873	Solanum lycopersicum	26.09	3.00e-07	50.40
IUUC-Stu-112586	Solanum tuberosum	20.96	4.00e-06	46.60
IUUC-Sar-113076	Sorex araneus	90.32	4.00e-135	474.00
IUUC-Sre-115143	Sporisorium reilianum	23.81	9.90e-02	32.00
IUUC-Ssc-115755	Sus scrofa	77.09	5.00e-153	533.00
IUUC-Tgu-117326	Taeniopygia guttata	98.39	0.00e+00	669.00
IUUC-Tru-117858	Takifugu rubripes	85.15	0.00e+00	649.00
IUUC-Tsy-119296	Tarsius syrichta	90.35	2.00e-179	620.00
IUUC-Tni-119822	Tetraodon nigroviridis	75.77	2.00e-159	555.00
IUUC-Tca-120935	Theobroma cacao	25.27	5.00e-08	53.50
IUUC-Tbe-127366	Tupaia belangeri	76.82	2.00e-150	525.00
IUUC-Ttr-128484	Tursiops truncatus	86.33	3.00e-171	594.00
IUUC-Vpa-130304	Vicugna pacos	97.64	2.00e-155	540.00
IUUC-Vvi-131560	Vitis vinifera	22.54	9.00e-06	45.80
IUUC-Xtr-132062	Xenopus tropicalis	78.21	2.00e-155	541.00
IUUC-Xma-134288	Xiphophorus maculatus	76.54	2.00e-162	565.00
IUUC-Yli-134374	Yarrowia lipolytica	21.26	1.00e-03	38.10
IUUC-Zma-135310	Zea mays	24.08	1.00e-03	38.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence