iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Csa-024228

Ensembl Protein ID

ENSCSAP00000011406.1

UniProt Accession

A0A0D9RS17; A0A0D9RS17_CHLSB

Genbank Protein ID

ENSCSAP00000011406

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AQIB01086781

Gene Name

WDR41

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCSAG00000015310.1	ENSCSAT00000013405.1	ENSCSAP00000011406.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-22	77.3	82	127

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcl.af........sdtllvsGsdDgtikvWDlrtgvllk 37
           gHt ++t++  f         + l++++s D t+ vWD +tg++++
   Q: 82   GHTQKITAIiTFpslesceeKNQLILTASADRTVTVWDSDTGRQVQ 127
           8*******7359999998764488******************9987 PP

Organism

Chlorocebus sabaeus

Protein Sequence
(Fasta)

MLRWLIGGGR EPQGLAEKSP LQTIGEEQTQ NPYTELLVLK AHHDIVRFLV QLDDYRFASA 60
GDDGIVVVWN AQTGEKLLEL NGHTQKITAI ITFPSLESCE EKNQLILTAS ADRTVTVWDS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAATTGCCA CAGCCGTCCC CGCCTCCGAC CGCCGCTCCG AAGTGATTGC CCAAACCAAG 60
CCTCTGTGGC TGGGTACGGA AGCGCTTTCG GGACAAAAAT TCTCGCTCAA CTGTGGTCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032045--C:guanyl-nucleotide exchange factor complex
GO:0005765--C:lysosomal membrane
GO:0017112--F:Rab guanyl-nucleotide exchange factor activity

KEGG

csab:103223459

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001900	Ailuropoda melanoleuca	91.97	0.00e+00	877.00
IUUC-Apl-004087	Anas platyrhynchos	76.89	0.00e+00	652.00
IUUC-Aca-005359	Anolis carolinensis	72.27	0.00e+00	693.00
IUUC-Ame-010669	Astyanax mexicanus	43.95	1.00e-80	293.00
IUUC-Bta-013534	Bos taurus	89.54	0.00e+00	861.00
IUUC-Cja-019219	Callithrix jacchus	95.64	0.00e+00	883.00
IUUC-Cfa-020310	Canis familiaris	92.78	0.00e+00	855.00
IUUC-Cpo-021664	Cavia porcellus	90.39	0.00e+00	869.00
IUUC-Cho-024898	Choloepus hoffmanni	88.79	4.00e-118	417.00
IUUC-Dre-028538	Danio rerio	56.02	3.00e-133	468.00
IUUC-Dno-028861	Dasypus novemcinctus	90.46	0.00e+00	866.00
IUUC-Dor-030111	Dipodomys ordii	89.76	0.00e+00	868.00
IUUC-Ete-032444	Echinops telfairi	90.65	4.00e-168	583.00
IUUC-Eca-033676	Equus caballus	90.85	0.00e+00	864.00
IUUC-Eeu-034571	Erinaceus europaeus	80.83	0.00e+00	763.00
IUUC-Fca-035387	Felis catus	93.28	0.00e+00	883.00
IUUC-Fal-037310	Ficedula albicollis	75.68	0.00e+00	692.00
IUUC-Gmo-039224	Gadus morhua	54.61	8.00e-133	466.00
IUUC-Gga-040957	Gallus gallus	77.10	0.00e+00	707.00
IUUC-Gac-042385	Gasterosteus aculeatus	54.82	4.00e-142	498.00
IUUC-Ggo-044973	Gorilla gorilla	96.97	0.00e+00	919.00
IUUC-Hsa-046842	Homo sapiens	97.17	0.00e+00	924.00
IUUC-Itr-048784	Ictidomys tridecemlineatus	93.48	0.00e+00	632.00
IUUC-Lch-049625	Latimeria chalumnae	63.52	9.00e-174	602.00
IUUC-Loc-052368	Lepisosteus oculatus	60.09	3.00e-158	551.00
IUUC-Laf-053678	Loxodonta africana	91.03	0.00e+00	867.00
IUUC-Mcc-055184	Macaca mulatta	98.43	0.00e+00	901.00
IUUC-Meu-056165	Macropus eugenii	77.78	0.00e+00	711.00
IUUC-Mga-060184	Meleagris gallopavo	74.68	1.00e-64	238.00
IUUC-Mmr-060965	Microcebus murinus	94.77	0.00e+00	899.00
IUUC-Mdo-062702	Monodelphis domestica	86.03	0.00e+00	835.00
IUUC-Mmu-063649	Mus musculus	81.67	1.00e-119	422.00
IUUC-Mpu-065747	Mustela putorius furo	91.50	0.00e+00	876.00
IUUC-Mlu-067873	Myotis lucifugus	92.39	0.00e+00	876.00
IUUC-Nle-069670	Nomascus leucogenys	97.60	0.00e+00	925.00
IUUC-Opr-070266	Ochotona princeps	82.20	0.00e+00	776.00
IUUC-Ont-071242	Oreochromis niloticus	55.05	6.00e-142	497.00
IUUC-Oan-072879	Ornithorhynchus anatinus	85.33	0.00e+00	792.00
IUUC-Ocu-074872	Oryctolagus cuniculus	68.00	4.00e-166	577.00
IUUC-Ola-087211	Oryzias latipes	49.23	5.00e-116	410.00
IUUC-Oga-088852	Otolemur garnettii	92.59	0.00e+00	890.00
IUUC-Oar-089812	Ovis aries	89.11	0.00e+00	854.00
IUUC-Ptr-091067	Pan troglodytes	97.82	0.00e+00	928.00
IUUC-Pan-091778	Papio anubis	98.48	0.00e+00	931.00
IUUC-Psi-093932	Pelodiscus sinensis	78.31	0.00e+00	719.00
IUUC-Pfo-096845	Poecilia formosa	55.43	2.00e-138	485.00
IUUC-Pab-097892	Pongo abelii	95.42	0.00e+00	810.00
IUUC-Pca-100567	Procavia capensis	69.28	9.00e-178	616.00
IUUC-Pva-102560	Pteropus vampyrus	90.20	0.00e+00	852.00
IUUC-Rno-105662	Rattus norvegicus	86.40	0.00e+00	827.00
IUUC-Sha-107058	Sarcophilus harrisii	85.02	0.00e+00	812.00
IUUC-Sar-113643	Sorex araneus	79.14	0.00e+00	699.00
IUUC-Ssc-115791	Sus scrofa	91.29	0.00e+00	873.00
IUUC-Tgu-117145	Taeniopygia guttata	77.46	0.00e+00	704.00
IUUC-Tru-117875	Takifugu rubripes	56.58	1.00e-145	509.00
IUUC-Tsy-119030	Tarsius syrichta	93.96	0.00e+00	717.00
IUUC-Tni-119761	Tetraodon nigroviridis	54.70	3.00e-139	488.00
IUUC-Tbe-127757	Tupaia belangeri	91.79	0.00e+00	768.00
IUUC-Ttr-128762	Tursiops truncatus	93.68	0.00e+00	894.00
IUUC-Vpa-130360	Vicugna pacos	93.46	0.00e+00	892.00
IUUC-Xtr-131954	Xenopus tropicalis	64.18	6.00e-170	590.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence