iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126554

Ensembl Protein ID

TRIUR3_28187-P1

UniProt Accession

M7ZUV3; M7ZUV3_TRIUA

Genbank Protein ID

EMS63416.1

Protein Name

Pre-mRNA-processing factor 17

Genbank Nucleotide ID

KD069334

Gene Name

TRIUR3_28187

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_28187	TRIUR3_28187-T1	TRIUR3_28187-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-25	87.9	277	309
UBD/Beta-Prp	7.30e-43	147.6	269	484

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDl 30
           gHt +v++++f +   +ll+s+s D++ik+WD+
   Q: 277  GHTKGVSAIRFsPKygHLLLSASMDCKIKIWDV 309
           8**********95455789*************7 PP

UBD/Beta-Prp

   S: 42   gkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwd.lstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetl 133
           + ++++  gh+++v+a++fsp++  +l+++s D  ik+wd l++ +c++t+ gh++ v+++sfs +g+k++s++ dr i+ wd+etgq+++++ 
   Q: 269  KRCVHEWVGHTKGVSAIRFSPKYGhLLLSASMDCKIKIWDvLESKTCMRTYMGHSKAVRDISFSNDGSKFLSAGYDRNIQYWDTETGQVISTFS 362
           5678888899999999999998877899999999999996256788888999999999999999999999999999999999999999999888 PP
   S: 134  sghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlng.htdnv 225
           +g+   v  ++ ++d+  +l +G+ D+++  Wd+k+g++ ++  + h ++v+ ++f +n +++v+ s+d+++++w++    +++   + h   +
   Q: 363  TGKVPYVVKLNPDEDKqHILLAGMSDKKIVQWDMKSGQITQEYDQ-HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEpHMHSM 455
           888888888888888888999999999999999999999999987.999999999999999999999999999999987766655554588999 PP
   S: 226  ksvrfspnderlvsgssDgsiriWdlrsg 254
            s++++pn+++l+  s D++i i+ ++ +
   Q: 456  PSIAVHPNSNWLAAQSLDNQILIYSTKER 484
           99999999999999999999999865544 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MDLLQSSYAP GDASSPEDES LSSPDTSPLR LPSKSAAPAV DETALALSAA ATSTSRPIDP 60
SLHLIPFNPT ADQLWAPVLG PQHPHAPISS ASGHRNHKLG HVEDAALLPF LFDEQYNTFH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCTCC TCCAGTCCTC GTACGCGCCT GGTGACGCAT CCTCGCCGGA GGACGAGTCG 60
CTCTCCTCCC CGGACACCTC CCCACTCCGC CTCCCCTCCA AGTCCGCCGC CCCCGCCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	97.36	0.00e+00	1038.00
IUUC-Aml-002243	Ailuropoda melanoleuca	44.01	2.00e-88	318.00
IUUC-Atr-002502	Amborella trichopoda	73.13	0.00e+00	780.00
IUUC-Apl-003885	Anas platyrhynchos	48.85	2.00e-142	498.00
IUUC-Aca-004854	Anolis carolinensis	34.23	3.00e-77	281.00
IUUC-Aly-006158	Arabidopsis lyrata	70.81	0.00e+00	776.00
IUUC-Ath-007474	Arabidopsis thaliana	71.85	0.00e+00	757.00
IUUC-Ago-007726	Ashbya gossypii	39.44	3.00e-68	251.00
IUUC-Acl-008220	Aspergillus clavatus	40.45	9.00e-112	396.00
IUUC-Afl-008473	Aspergillus flavus	40.82	7.00e-109	386.00
IUUC-Afu-008773	Aspergillus fumigatus	41.52	7.00e-114	403.00
IUUC-Ani-009323	Aspergillus nidulans	38.84	2.00e-98	351.00
IUUC-Ang-009851	Aspergillus niger	40.49	2.00e-111	395.00
IUUC-Aor-009950	Aspergillus oryzae	40.82	7.00e-109	386.00
IUUC-Ate-010372	Aspergillus terreus	39.56	4.00e-111	394.00
IUUC-Ame-011660	Astyanax mexicanus	49.13	4.00e-143	500.00
IUUC-Bgr-012230	Blumeria graminis	38.92	1.00e-105	375.00
IUUC-Bta-012568	Bos taurus	48.24	8.00e-142	496.00
IUUC-Bci-013646	Botrytis cinerea	51.21	5.00e-105	374.00
IUUC-Bdi-014199	Brachypodium distachyon	95.60	0.00e+00	1016.00
IUUC-Bol-015695	Brassica oleracea	68.99	0.00e+00	773.00
IUUC-Bra-017923	Brassica rapa	70.68	0.00e+00	798.00
IUUC-Cel-018535	Caenorhabditis elegans	37.73	2.00e-113	402.00
IUUC-Cja-019071	Callithrix jacchus	47.85	2.00e-142	498.00
IUUC-Cfa-020559	Canis familiaris	48.24	2.00e-141	494.00
IUUC-Cpo-022356	Cavia porcellus	48.03	6.00e-143	499.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	47.63	1.00e-85	308.00
IUUC-Csa-023125	Chlorocebus sabaeus	47.85	8.00e-143	499.00
IUUC-Cho-024676	Choloepus hoffmanni	62.24	2.00e-131	461.00
IUUC-Cin-025229	Ciona intestinalis	48.94	3.00e-142	497.00
IUUC-Csv-025868	Ciona savignyi	63.04	5.00e-34	134.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	46.76	5.00e-93	333.00
IUUC-Cne-026885	Cryptococcus neoformans	45.89	2.00e-124	438.00
IUUC-Dre-027631	Danio rerio	49.42	1.00e-145	508.00
IUUC-Dno-029815	Dasypus novemcinctus	62.99	1.00e-129	456.00
IUUC-Dor-031143	Dipodomys ordii	61.56	1.00e-125	442.00
IUUC-Dse-031520	Dothistroma septosporum	47.31	5.00e-95	340.00
IUUC-Dme-032050	Drosophila melanogaster	46.10	2.00e-140	491.00
IUUC-Ete-032866	Echinops telfairi	46.25	2.00e-137	481.00
IUUC-Eca-033384	Equus caballus	47.49	2.00e-140	491.00
IUUC-Eeu-034471	Erinaceus europaeus	38.93	9.00e-94	336.00
IUUC-Fca-035727	Felis catus	47.50	7.00e-142	496.00
IUUC-Fal-036774	Ficedula albicollis	49.62	6.00e-144	503.00
IUUC-Fox-037951	Fusarium oxysporum	50.44	7.00e-104	370.00
IUUC-Fso-038287	Fusarium solani	52.07	2.00e-104	372.00
IUUC-Gmo-039670	Gadus morhua	49.61	6.00e-145	506.00
IUUC-Ggr-039764	Gaeumannomyces graminis	48.40	7.00e-100	356.00
IUUC-Gga-040293	Gallus gallus	49.32	6.00e-144	503.00
IUUC-Gac-042159	Gasterosteus aculeatus	48.74	2.00e-141	494.00
IUUC-Gma-044299	Glycine max	73.65	0.00e+00	765.00
IUUC-Ggo-044864	Gorilla gorilla	47.85	7.00e-143	499.00
IUUC-Hsa-046602	Homo sapiens	47.85	7.00e-143	499.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	62.72	4.00e-131	460.00
IUUC-Kpa-049318	Komagataella pastoris	45.69	8.00e-90	323.00
IUUC-Lch-049796	Latimeria chalumnae	44.42	2.00e-117	415.00
IUUC-Lpe-051153	Leersia perrieri	89.47	0.00e+00	995.00
IUUC-Loc-052467	Lepisosteus oculatus	49.52	2.00e-144	505.00
IUUC-Lma-053107	Leptosphaeria maculans	50.89	3.00e-103	367.00
IUUC-Laf-053787	Loxodonta africana	47.70	4.00e-145	507.00
IUUC-Mcc-055706	Macaca mulatta	47.85	9.00e-143	499.00
IUUC-Meu-056757	Macropus eugenii	59.46	3.00e-113	401.00
IUUC-Mor-057079	Magnaporthe oryzae	49.56	7.00e-102	363.00
IUUC-Mpo-057533	Magnaporthe poae	48.98	6.00e-101	360.00
IUUC-Mtr-057950	Medicago truncatula	69.18	0.00e+00	788.00
IUUC-Mla-058910	Melampsora laricipopulina	44.75	3.00e-134	471.00
IUUC-Mga-059366	Meleagris gallopavo	49.32	1.00e-143	502.00
IUUC-Mvi-060349	Microbotryum violaceum	42.50	3.00e-121	427.00
IUUC-Mmr-061209	Microcebus murinus	48.03	9.00e-145	506.00
IUUC-Mdo-062118	Monodelphis domestica	49.43	3.00e-143	501.00
IUUC-Mmu-063173	Mus musculus	49.42	4.00e-142	497.00
IUUC-Mac-065109	Musa acuminata	88.32	0.00e+00	634.00
IUUC-Mpu-066659	Mustela putorius furo	48.24	7.00e-142	496.00
IUUC-Mlu-067029	Myotis lucifugus	49.42	2.00e-141	494.00
IUUC-Nfi-068334	Neosartorya fischeri	41.71	4.00e-114	404.00
IUUC-Ncr-068675	Neurospora crassa	47.52	5.00e-89	320.00
IUUC-Nle-070113	Nomascus leucogenys	47.56	3.00e-142	497.00
IUUC-Opr-070685	Ochotona princeps	62.54	3.00e-132	464.00
IUUC-Ont-071680	Oreochromis niloticus	49.61	1.00e-144	505.00
IUUC-Oan-073573	Ornithorhynchus anatinus	48.67	1.00e-131	462.00
IUUC-Ocu-074074	Oryctolagus cuniculus	48.21	6.00e-145	506.00
IUUC-Oba-075625	Oryza barthii	89.86	0.00e+00	1004.00
IUUC-Obr-076510	Oryza brachyantha	89.49	0.00e+00	1008.00
IUUC-Ogl-077275	Oryza glaberrima	89.86	0.00e+00	1004.00
IUUC-Ogu-078563	Oryza glumaepatula	89.86	0.00e+00	1003.00
IUUC-Oin-079898	Oryza indica	92.57	0.00e+00	755.00
IUUC-Olo-081080	Oryza longistaminata	88.64	0.00e+00	871.00
IUUC-Oni-083121	Oryza nivara	89.69	0.00e+00	1003.00
IUUC-Opu-083329	Oryza punctata	90.37	0.00e+00	994.00
IUUC-Oru-084807	Oryza rufipogon	88.95	0.00e+00	899.00
IUUC-Osa-086039	Oryza sativa	89.86	0.00e+00	1004.00
IUUC-Ola-087149	Oryzias latipes	49.61	1.00e-144	505.00
IUUC-Olu-087627	Ostreococcus lucimarinus	47.36	1.00e-133	468.00
IUUC-Oga-088359	Otolemur garnettii	49.42	5.00e-142	496.00
IUUC-Oar-089390	Ovis aries	48.24	2.00e-141	494.00
IUUC-Ptr-090894	Pan troglodytes	47.85	7.00e-143	499.00
IUUC-Pan-092476	Papio anubis	47.85	9.00e-143	499.00
IUUC-Psi-093527	Pelodiscus sinensis	48.56	3.00e-129	454.00
IUUC-Pno-094771	Phaeosphaeria nodorum	50.30	3.00e-102	364.00
IUUC-Ppa-095386	Physcomitrella patens	70.61	0.00e+00	764.00
IUUC-Pfo-096139	Poecilia formosa	49.13	2.00e-143	501.00
IUUC-Pab-097838	Pongo abelii	46.92	2.00e-121	428.00
IUUC-Pop-099962	Populus trichocarpa	73.61	0.00e+00	794.00
IUUC-Pca-100876	Procavia capensis	54.28	9.00e-108	383.00
IUUC-Ppe-101777	Prunus persica	72.41	0.00e+00	780.00
IUUC-Pva-102418	Pteropus vampyrus	49.03	6.00e-141	493.00
IUUC-Pgr-103456	Puccinia graminis	48.78	2.00e-141	494.00
IUUC-Ptt-103731	Puccinia triticina	47.91	7.00e-131	459.00
IUUC-Pte-104386	Pyrenophora teres	50.45	3.00e-102	364.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	50.45	6.00e-102	363.00
IUUC-Rno-105694	Rattus norvegicus	46.42	3.00e-135	474.00
IUUC-Sce-106339	Saccharomyces cerevisiae	38.92	5.00e-76	277.00
IUUC-Sha-106709	Sarcophilus harrisii	49.03	3.00e-142	497.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	36.63	6.00e-103	367.00
IUUC-Spo-108331	Schizosaccharomyces pombe	47.80	9.00e-98	349.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	53.42	9.00e-95	339.00
IUUC-Smo-109326	Selaginella moellendorffii	60.42	1.00e-180	625.00
IUUC-Sit-110446	Setaria italica	87.08	0.00e+00	957.00
IUUC-Sly-111330	Solanum lycopersicum	70.49	0.00e+00	761.00
IUUC-Stu-112610	Solanum tuberosum	68.79	0.00e+00	768.00
IUUC-Sar-113065	Sorex araneus	50.79	2.00e-31	129.00
IUUC-Sbi-114005	Sorghum bicolor	87.04	0.00e+00	928.00
IUUC-Sre-114988	Sporisorium reilianum	45.89	5.00e-134	470.00
IUUC-Ssc-115760	Sus scrofa	47.68	2.00e-142	498.00
IUUC-Tgu-116493	Taeniopygia guttata	49.43	3.00e-145	508.00
IUUC-Tru-118489	Takifugu rubripes	49.22	2.00e-144	504.00
IUUC-Tsy-119332	Tarsius syrichta	48.03	9.00e-145	506.00
IUUC-Tni-120202	Tetraodon nigroviridis	47.97	2.00e-136	478.00
IUUC-Tca-121429	Theobroma cacao	70.87	0.00e+00	795.00
IUUC-Tre-122162	Trichoderma reesei	52.48	4.00e-106	377.00
IUUC-Tvi-122500	Trichoderma virens	52.65	9.00e-107	379.00
IUUC-Tae-125557	Triticum aestivum	99.65	0.00e+00	1063.00
IUUC-Tme-126919	Tuber melanosporum	42.72	3.00e-120	424.00
IUUC-Tbe-127968	Tupaia belangeri	45.18	4.00e-131	461.00
IUUC-Ttr-129215	Tursiops truncatus	48.05	7.00e-140	489.00
IUUC-Uma-129622	Ustilago maydis	46.42	4.00e-135	474.00
IUUC-Vda-129750	Verticillium dahliae	51.47	5.00e-106	377.00
IUUC-Vpa-130617	Vicugna pacos	49.03	6.00e-138	483.00
IUUC-Vvi-131238	Vitis vinifera	70.94	0.00e+00	799.00
IUUC-Xtr-131865	Xenopus tropicalis	50.10	6.00e-144	503.00
IUUC-Xma-133627	Xiphophorus maculatus	49.52	4.00e-144	503.00
IUUC-Yli-134390	Yarrowia lipolytica	39.63	6.00e-100	357.00
IUUC-Zma-134910	Zea mays	89.11	0.00e+00	944.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence