iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129750

Ensembl Protein ID

EGY17450

UniProt Accession

G2WTK9; G2WTK9_VERDV

Genbank Protein ID

EGY17450.1

Protein Name

Pre-mRNA-processing factor 17

Genbank Nucleotide ID

DS572696

Gene Name

VDAG_01132

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_01132	EGY17450	EGY17450

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-27	93.7	281	318
UBD/Beta-Prp	2.90e-47	160.4	230	441

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gHt  +++  f  d t ++s+s D +ik+WD+ tg+++
   Q: 281  GHTKAISDATFnFDgTQFLSASFDRQIKLWDTETGTCI 318
           89******9999566********************996 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvy 184
            ++h++k h + v++++f+p sg+ l+s+s+d+t+++wd+ ++ +l  t sgh+++++ ++++ dg  + s+s Dr+++lWd +tg+++ +++ g+t+ v 
   Q: 230  RQIHVWKDHAKAVTATRFFPeSGHLLLSASADSTVKIWDVYHQRELLRTYSGHTKAISDATFNFDGTQFLSASFDRQIKLWDTETGTCISRFSTGKTPHVV 330
           689*****************777*********************************************************************888998888 PP
   S: 185  slsfdsng.kelvsgsldgtvklwdlq.tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlg 283
             + + +   e+v+g  d+++  wd +  +e+v+++  h + ++ + f +++ r++++s+D+s+r Wd+    ++k ++ +    +  a+ ++++++++  
   Q: 331  RFNPTAEHaHEFVAGMSDKKIVQWDTRaGNEIVQEYDHHLAAINTITFVDEGRRFMTTSDDKSLRAWDYNIPVPIKYIAEPYMYPMTRAAPHPSGKYVAYQ 431
           88855554599****************55578**************************************9999999999996666666678999999999 PP
   S: 284  sedskvniwk 293
           s+d+++ ++ 
   Q: 432  SSDNQIVVYG 441
           9999999986 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MSGFGDYPPN MAPQDALIVR REAEADHAVV PYSGEDLARP RMGPANPFKD ESANNALKRK 60
NVLTGFAEET HVSEHTFRSK HRAIERKGGP EREYQSGAQV KQEAERIRAG REGKGDAAIA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCGGCT TCGGAGACTA CCCGCCGAAC ATGGCGCCCC AGGATGCGCT GATCGTACGA 60
CGAGAAGCCG AGGCCGACCA CGCCGTCGTC CCCTACTCGG GCGAGGACCT CGCGCGACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0071014--C:post-mRNA release spliceosomal complex
GO:0000974--C:Prp19 complex
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

vda:VDAG_01132

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	51.91	3.00e-108	384.00
IUUC-Aml-002243	Ailuropoda melanoleuca	43.23	2.00e-83	300.00
IUUC-Atr-002502	Amborella trichopoda	52.16	9.00e-110	389.00
IUUC-Apl-003885	Anas platyrhynchos	44.85	2.00e-126	443.00
IUUC-Aca-004854	Anolis carolinensis	31.49	8.00e-70	256.00
IUUC-Aly-006158	Arabidopsis lyrata	52.33	6.00e-110	389.00
IUUC-Ath-007474	Arabidopsis thaliana	52.03	2.00e-109	388.00
IUUC-Ago-007726	Ashbya gossypii	40.26	1.00e-79	288.00
IUUC-Acl-008220	Aspergillus clavatus	60.38	0.00e+00	634.00
IUUC-Afl-008473	Aspergillus flavus	60.38	0.00e+00	626.00
IUUC-Afu-008773	Aspergillus fumigatus	60.00	0.00e+00	640.00
IUUC-Ani-009323	Aspergillus nidulans	57.77	2.00e-160	556.00
IUUC-Ang-009851	Aspergillus niger	60.76	0.00e+00	635.00
IUUC-Aor-009950	Aspergillus oryzae	60.38	0.00e+00	626.00
IUUC-Ate-010372	Aspergillus terreus	59.85	0.00e+00	640.00
IUUC-Ame-011660	Astyanax mexicanus	44.05	7.00e-124	435.00
IUUC-Bgr-012230	Blumeria graminis	67.35	0.00e+00	774.00
IUUC-Bta-012568	Bos taurus	44.38	4.00e-124	436.00
IUUC-Bci-013646	Botrytis cinerea	70.49	0.00e+00	737.00
IUUC-Bdi-014199	Brachypodium distachyon	52.34	2.00e-109	387.00
IUUC-Bol-015695	Brassica oleracea	51.54	4.00e-111	393.00
IUUC-Bra-017923	Brassica rapa	51.40	1.00e-110	391.00
IUUC-Cel-018535	Caenorhabditis elegans	39.07	1.00e-103	369.00
IUUC-Cja-019071	Callithrix jacchus	44.19	1.00e-123	435.00
IUUC-Cfa-020559	Canis familiaris	44.38	7.00e-124	436.00
IUUC-Cpo-022356	Cavia porcellus	44.19	1.00e-123	435.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	37.36	3.00e-62	229.00
IUUC-Csa-023125	Chlorocebus sabaeus	44.19	9.00e-124	435.00
IUUC-Cho-024676	Choloepus hoffmanni	48.30	5.00e-122	429.00
IUUC-Cin-025229	Ciona intestinalis	43.93	3.00e-123	433.00
IUUC-Csv-025868	Ciona savignyi	62.92	2.00e-33	131.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	80.98	0.00e+00	825.00
IUUC-Cne-026885	Cryptococcus neoformans	44.10	4.00e-118	416.00
IUUC-Dre-027631	Danio rerio	43.13	4.00e-125	440.00
IUUC-Dno-029815	Dasypus novemcinctus	42.72	6.00e-120	422.00
IUUC-Dor-030978	Dipodomys ordii	45.18	3.00e-111	393.00
IUUC-Dse-031520	Dothistroma septosporum	53.28	3.00e-146	509.00
IUUC-Dme-032050	Drosophila melanogaster	40.26	3.00e-112	397.00
IUUC-Ete-032866	Echinops telfairi	43.82	1.00e-119	422.00
IUUC-Eca-033384	Equus caballus	44.38	2.00e-122	430.00
IUUC-Eeu-034471	Erinaceus europaeus	36.72	6.00e-84	303.00
IUUC-Fca-035727	Felis catus	44.38	4.00e-124	436.00
IUUC-Fal-036774	Ficedula albicollis	44.74	5.00e-127	446.00
IUUC-Fox-037951	Fusarium oxysporum	78.15	0.00e+00	872.00
IUUC-Fso-038287	Fusarium solani	79.66	0.00e+00	846.00
IUUC-Gmo-039670	Gadus morhua	44.38	1.00e-127	447.00
IUUC-Ggr-039764	Gaeumannomyces graminis	70.09	0.00e+00	782.00
IUUC-Gga-040293	Gallus gallus	44.34	8.00e-126	442.00
IUUC-Gac-042159	Gasterosteus aculeatus	43.63	3.00e-127	447.00
IUUC-Gma-044299	Glycine max	52.92	3.00e-109	387.00
IUUC-Ggo-044864	Gorilla gorilla	44.19	6.00e-124	436.00
IUUC-Hsa-046602	Homo sapiens	44.19	6.00e-124	436.00
IUUC-Hvu-047431	Hordeum vulgare	28.67	7.00e-34	135.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	50.00	1.00e-118	417.00
IUUC-Kpa-049318	Komagataella pastoris	39.37	7.00e-103	365.00
IUUC-Lch-049796	Latimeria chalumnae	46.06	7.00e-107	379.00
IUUC-Lpe-051153	Leersia perrieri	52.20	9.00e-109	385.00
IUUC-Loc-052467	Lepisosteus oculatus	45.21	4.00e-128	449.00
IUUC-Lma-053107	Leptosphaeria maculans	57.86	7.00e-159	551.00
IUUC-Laf-053787	Loxodonta africana	44.42	6.00e-127	446.00
IUUC-Mcc-055706	Macaca mulatta	44.19	1.00e-123	435.00
IUUC-Meu-056757	Macropus eugenii	53.31	9.00e-101	358.00
IUUC-Mor-057079	Magnaporthe oryzae	69.56	0.00e+00	793.00
IUUC-Mpo-057533	Magnaporthe poae	63.36	0.00e+00	682.00
IUUC-Mtr-057950	Medicago truncatula	52.62	2.00e-109	387.00
IUUC-Mla-058910	Melampsora laricipopulina	50.82	9.00e-117	412.00
IUUC-Mga-059366	Meleagris gallopavo	44.34	1.00e-125	441.00
IUUC-Mvi-060349	Microbotryum violaceum	47.48	3.00e-113	400.00
IUUC-Mmr-061209	Microcebus murinus	44.38	5.00e-127	446.00
IUUC-Mdo-062118	Monodelphis domestica	44.98	1.00e-128	451.00
IUUC-Mmu-063173	Mus musculus	44.38	4.00e-124	436.00
IUUC-Mac-065080	Musa acuminata	52.33	8.00e-110	389.00
IUUC-Mpu-066659	Mustela putorius furo	44.38	3.00e-124	436.00
IUUC-Mlu-067029	Myotis lucifugus	44.47	3.00e-124	437.00
IUUC-Nfi-068334	Neosartorya fischeri	60.46	0.00e+00	641.00
IUUC-Ncr-068675	Neurospora crassa	63.17	0.00e+00	678.00
IUUC-Nle-070113	Nomascus leucogenys	44.19	9.00e-124	435.00
IUUC-Opr-070685	Ochotona princeps	55.52	4.00e-121	426.00
IUUC-Ont-071680	Oreochromis niloticus	44.19	1.00e-125	441.00
IUUC-Oan-073573	Ornithorhynchus anatinus	44.67	5.00e-121	426.00
IUUC-Ocu-074074	Oryctolagus cuniculus	44.57	8.00e-127	445.00
IUUC-Oba-075625	Oryza barthii	52.49	2.00e-109	387.00
IUUC-Obr-076510	Oryza brachyantha	52.34	2.00e-109	387.00
IUUC-Ogl-077275	Oryza glaberrima	52.49	2.00e-109	387.00
IUUC-Ogu-078563	Oryza glumaepatula	52.49	2.00e-109	387.00
IUUC-Oin-079898	Oryza indica	52.05	3.00e-108	383.00
IUUC-Olo-081080	Oryza longistaminata	52.49	3.00e-109	387.00
IUUC-Oni-083121	Oryza nivara	52.49	3.00e-109	387.00
IUUC-Opu-083329	Oryza punctata	52.49	3.00e-109	387.00
IUUC-Oru-084807	Oryza rufipogon	54.42	5.00e-95	339.00
IUUC-Osa-086039	Oryza sativa	52.63	5.00e-110	389.00
IUUC-Ola-087149	Oryzias latipes	44.57	4.00e-127	446.00
IUUC-Olu-087627	Ostreococcus lucimarinus	45.75	2.00e-90	324.00
IUUC-Oga-088359	Otolemur garnettii	44.38	5.00e-124	436.00
IUUC-Oar-089390	Ovis aries	44.38	8.00e-124	436.00
IUUC-Ptr-090894	Pan troglodytes	44.19	6.00e-124	436.00
IUUC-Pan-092476	Papio anubis	44.19	1.00e-123	435.00
IUUC-Psi-093527	Pelodiscus sinensis	44.63	1.00e-115	408.00
IUUC-Pno-094771	Phaeosphaeria nodorum	58.32	4.00e-162	562.00
IUUC-Ppa-095386	Physcomitrella patens	54.60	8.00e-113	399.00
IUUC-Pfo-096139	Poecilia formosa	44.38	1.00e-127	447.00
IUUC-Pab-097838	Pongo abelii	44.08	4.00e-105	373.00
IUUC-Pop-098945	Populus trichocarpa	52.33	4.00e-109	386.00
IUUC-Pca-100876	Procavia capensis	47.03	9.00e-96	342.00
IUUC-Ppe-101777	Prunus persica	53.51	1.00e-109	388.00
IUUC-Pva-102418	Pteropus vampyrus	44.19	4.00e-123	433.00
IUUC-Pgr-103456	Puccinia graminis	55.17	1.00e-128	451.00
IUUC-Ptt-103731	Puccinia triticina	42.78	2.00e-121	427.00
IUUC-Pte-104386	Pyrenophora teres	56.63	4.00e-151	526.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	57.26	1.00e-152	530.00
IUUC-Rno-105694	Rattus norvegicus	50.00	1.00e-118	418.00
IUUC-Sce-106339	Saccharomyces cerevisiae	41.09	6.00e-83	299.00
IUUC-Sha-106709	Sarcophilus harrisii	44.79	2.00e-127	447.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	43.40	2.00e-127	447.00
IUUC-Spo-108331	Schizosaccharomyces pombe	41.40	7.00e-123	432.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	68.76	0.00e+00	684.00
IUUC-Smo-109326	Selaginella moellendorffii	47.18	1.00e-94	338.00
IUUC-Sit-110446	Setaria italica	52.92	2.00e-109	387.00
IUUC-Sly-111330	Solanum lycopersicum	53.20	3.00e-111	393.00
IUUC-Stu-112610	Solanum tuberosum	52.91	6.00e-111	392.00
IUUC-Sar-113065	Sorex araneus	39.80	8.00e-37	145.00
IUUC-Sbi-114005	Sorghum bicolor	52.75	6.00e-109	386.00
IUUC-Sre-114988	Sporisorium reilianum	42.86	8.00e-131	459.00
IUUC-Ssc-115760	Sus scrofa	44.38	4.00e-124	436.00
IUUC-Tgu-116493	Taeniopygia guttata	44.72	8.00e-128	448.00
IUUC-Tru-118489	Takifugu rubripes	43.22	1.00e-124	438.00
IUUC-Tsy-119332	Tarsius syrichta	44.38	5.00e-127	446.00
IUUC-Tni-120202	Tetraodon nigroviridis	41.68	8.00e-114	402.00
IUUC-Tca-121429	Theobroma cacao	52.16	6.00e-108	382.00
IUUC-Tre-122162	Trichoderma reesei	72.23	0.00e+00	790.00
IUUC-Tvi-122500	Trichoderma virens	70.86	0.00e+00	776.00
IUUC-Tae-125557	Triticum aestivum	51.75	6.00e-108	382.00
IUUC-Tur-126554	Triticum urartu	51.47	4.00e-106	376.00
IUUC-Tme-126919	Tuber melanosporum	57.66	1.00e-171	594.00
IUUC-Tbe-127968	Tupaia belangeri	42.25	1.00e-115	408.00
IUUC-Ttr-129215	Tursiops truncatus	44.19	5.00e-122	429.00
IUUC-Uma-129622	Ustilago maydis	42.45	7.00e-129	452.00
IUUC-Vpa-130617	Vicugna pacos	44.27	4.00e-124	436.00
IUUC-Vvi-131238	Vitis vinifera	51.87	5.00e-108	383.00
IUUC-Xtr-131865	Xenopus tropicalis	43.45	7.00e-128	449.00
IUUC-Xma-133627	Xiphophorus maculatus	44.49	3.00e-127	446.00
IUUC-Yli-134390	Yarrowia lipolytica	54.20	6.00e-115	405.00
IUUC-Zma-135925	Zea mays	52.75	4.00e-104	370.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence